CsGy5G024840 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G024840
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionacyl-acyl carrier protein thioesterase ATL3, chloroplastic-like
LocationGy14Chr5: 29306976 .. 29309627 (-)
RNA-Seq ExpressionCsGy5G024840
SyntenyCsGy5G024840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTGTAAGGCAAATTATTTCCCACAAGACTATTTCTAATGCTTTCTAGACAACTTTGAAATAAGATTTAACATATTTGTAAGATGTGGGATTTGAACCCACGCCCTGAAGGACGAAAATTTAGGTGTGGCGGTTTAGACCACTCGACCACACTGACCCGCTAAATTCACAAACCCAATTCACTCCGATTGCCATTCTCAACAAATCCGCCGACGACAGCACAAGAATCCGCGCGATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGTACTTTCCACATTTCAGGAATTTTCAATCTATTTTTCCCATTTAGTATTCTCTGTTAAGATCTTTGACATATGTTGTCCCCCACGGCTTTTGCTCCGTCGACATTAGCGGCCTTCGCGCATTATGTCTCCCCGCCCCTTCTCTCGGGGAGAACAATTGCTAATGATTTTGATAATCGTTTCATGTTTACGAGTGTTGGATTTTTTTTTTTTTTTTATATATAGCTGCATCGGTTTCTACAATTAGGGGATGAATTCTTTTGATGTTTGCCCTTTGCATTGTAATTGTTGTTTCTGCTGAAATTGTCCTGAATTGATGTCTTTTGTTTTGGTTTGGATAAAATTATTGAAAAATGTTAGAGATTGAGCATGTAATACCTTGACCATGACAGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTAAAATCAAATATCCACTTCTTTGAAGCTTCTTAGTGATTATTTTTCTCAAATTTTTTTGCTCATTATTCTTATTTCTTCTACTGATCTTTGAGTGAATTGGGGTGACTTTATTTTCCCTCTCCAGGGTTCTGTTTCTTTATGCTGTTTTTTCTCTCACTCCCTCCTCTTTTTTTGGGGGGTATCTTTTCATTATTTCAGTGAGAAGATTGTATGTAAGTGTGGAGGGAGTCTTCACCGTTTCAAATGTTGGTGTTTGTTTGTGTCTAATGTGCTCAGAAATTATGTTTCAAGTTAATAAGCATTACATTTCATTGTAGCTTATAACCATTACGATTATTTCTTTTCTGGGGAAGTGGTTTTTAAGTAGTATAAATGGTTGATGCAAGAATCAATTACTTCAATAATAATATTTAGTTTGTAGACAGAATGCTGTTTGAAATCACCAAAAATTATTCTTTTCTGTTTTTGCTGAAGTTAACATTAAGATATCTTGACAATTCCATTTGTTCACTGAACTATATCCTTTTTTCATGATAGTTGATAAGTCTAAAATTTGAGGGGCATTTGTCTGGAAGATGTAAAATGTTGAATATTAATTGGTGTTCATCGGCTCAAAACTTTGAAGTGTTTCGATTGAGTTGGGAAATAGATCATAGAAGTACTATATTTCTCCCCCAAGATTTCAATCATTTTTCGGTTTTACCATGATTACTTGAACCTTACTATTCTCAAAGCGTTATTGCTGAATTCAAAACATGTTATATTTGATTTAAAAGACATTAAATCGAGGACTTAATCAGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAGTACGATATCTTTTGTAGTTAACATTGAATGACCGATAACTGATAGAACAATTTAAGCTATAAAAACAATTTATTTACTCAATATCTTACTACTCTTATATTGTCTTATGAATGCAACTAGAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGGTTGGTATTGGATCCTATAATTTGCCTAAGTATATCAACTTATCTGGATGATTGCGGTAACTTTATAATACCATTTCCTGTCTTGTTTTCTTTCCGTAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGATCAACTTTGAGATGATATTTTGTATCTTCTGGAGAAGGCTAAAATAGGAGGTACTCAGCACATATCTGATTCATATACCAAAGTCCATCCATAGTAATGAATATTCTTGCGTTTTCTCAAACTGTAGTTCATATACACACAACATCACTCTGATTTTCATAGGTTTTGCAGTGGTAAAAAGCATATTGTTCGATGAAACGAACTAACTGAACAAGATCTATTCCATAAGTTGTAGATTTTTATACAGGATAAAAGTTTCATACTGATATCCATCTTCTCCATCTGAGAAAGAAAAAAGTTGAAGCTTTTCATATTGGCACTCGAGAATATTTTCAAATACATAATATATATATATATATACACTGTTTTCACCACTTTGTAATTGAG

mRNA sequence

AGTTTGTAAGGCAAATTATTTCCCACAAGACTATTTCTAATGCTTTCTAGACAACTTTGAAATAAGATTTAACATATTTGTAAGATGTGGGATTTGAACCCACGCCCTGAAGGACGAAAATTTAGGTGTGGCGGTTTAGACCACTCGACCACACTGACCCGCTAAATTCACAAACCCAATTCACTCCGATTGCCATTCTCAACAAATCCGCCGACGACAGCACAAGAATCCGCGCGATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGATCAACTTTGAGATGATATTTTGTATCTTCTGGAGAAGGCTAAAATAGGAGGTACTCAGCACATATCTGATTCATATACCAAAGTCCATCCATAGTAATGAATATTCTTGCGTTTTCTCAAACTGTAGTTCATATACACACAACATCACTCTGATTTTCATAGGTTTTGCAGTGGTAAAAAGCATATTGTTCGATGAAACGAACTAACTGAACAAGATCTATTCCATAAGTTGTAGATTTTTATACAGGATAAAAGTTTCATACTGATATCCATCTTCTCCATCTGAGAAAGAAAAAAGTTGAAGCTTTTCATATTGGCACTCGAGAATATTTTCAAATACATAATATATATATATATATACACTGTTTTCACCACTTTGTAATTGAG

Coding sequence (CDS)

ATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGA

Protein sequence

MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHESK*
Homology
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: S4TE15 (Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=3486 GN=TE3 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-67
Identity = 136/207 (65.70%), Postives = 156/207 (75.36%), Query Frame = 0

Query: 1   MLQS---SITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISS-SF 60
           MLQ+   S  P+  P    +  ++      SV FP+ R     RLR LP  R   S+  F
Sbjct: 1   MLQTFSPSYKPLHLPISSLSLSSSSSSSASSVAFPVTRLLIPPRLRVLPNPRRRCSALPF 60

Query: 61  DLKAGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDG 120
           D++ GKGM  F ++ELKVRDYELDQ+GVVNNAVYASYCQHGRHELLES GLS DAVAR+G
Sbjct: 61  DIRGGKGMSEFYEVELKVRDYELDQYGVVNNAVYASYCQHGRHELLESFGLSCDAVARNG 120

Query: 121 DALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVW 180
           DALALSELSLKFLAPLRSGDKFVVKVR+SG S AR Y DHLIFKLPN EPIL+AKGTAVW
Sbjct: 121 DALALSELSLKFLAPLRSGDKFVVKVRLSGSSAARLYFDHLIFKLPNQEPILDAKGTAVW 180

Query: 181 LNKSYRPVRIPQEFLSKFGQFVQDHES 204
           L+K+YRPVRIP E  SK  QF+++ ES
Sbjct: 181 LDKNYRPVRIPPEVRSKLVQFLRNEES 207

BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q8W583 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT3 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.6e-59
Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 0

Query: 24  PVPPSVVFPIA-RPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQF 83
           P  P+VVF  + R   S+ LRS+   +    + FDLK GKGM  F ++ELKVRDYELDQF
Sbjct: 11  PAMPAVVFLNSWRRPLSIPLRSVKTFKP--LAFFDLKGGKGMSEFHEVELKVRDYELDQF 70

Query: 84  GVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKV 143
           GVVNNAVYA+YCQHGRHE LESIG++ D VAR G+ALA+SEL++KFL+PLRSGDKFVVK 
Sbjct: 71  GVVNNAVYANYCQHGRHEFLESIGINCDEVARSGEALAISELTMKFLSPLRSGDKFVVKA 130

Query: 144 RISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHE 203
           RISG S AR Y DH IFKLPN EPILEAKG AVWL+  YRPVRIP    SKF  F++  +
Sbjct: 131 RISGTSAARIYFDHFIFKLPNQEPILEAKGIAVWLDNKYRPVRIPSSIRSKFVHFLRQDD 189

BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: F4HX80 (Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT4 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-53
Identity = 110/177 (62.15%), Postives = 128/177 (72.32%), Query Frame = 0

Query: 28  SVVFPIA-RPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVN 87
           SVVFP + R    L LRS  A      +  DLK GK M  F ++ELKVRDYELDQFGVVN
Sbjct: 13  SVVFPTSWRQPVMLPLRS--AKTFKPHTFLDLKGGKEMSEFHEVELKVRDYELDQFGVVN 72

Query: 88  NAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISG 147
           NAVYA+YCQHG HE LESIG++ D VAR G+ALA+SEL++ FLAPLRSGDKFVVKV IS 
Sbjct: 73  NAVYANYCQHGMHEFLESIGINCDEVARSGEALAISELTMNFLAPLRSGDKFVVKVNISR 132

Query: 148 ISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHES 204
            S AR Y DH I KLPN E ILEAK T VWL+  +RPVRIP    SKF  F++ +++
Sbjct: 133 TSAARIYFDHSILKLPNQEVILEAKATVVWLDNKHRPVRIPSSIRSKFVHFLRQNDT 187

BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q9C7I5 (Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT1 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-52
Identity = 109/175 (62.29%), Postives = 129/175 (73.71%), Query Frame = 0

Query: 29  VVFPI--ARPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVN 88
           VVFP   +RP   L LRS    +    S F  + GKGM+   +IELKVRDYELDQFGVVN
Sbjct: 14  VVFPCFSSRP-LILPLRSTKTFKP--LSCFKQQGGKGMNGVHEIELKVRDYELDQFGVVN 73

Query: 89  NAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISG 148
           NAVYA+YCQHG+HE +E+IG++ D V+R G+ALA+SEL++KFLAPLRSG KFVVK RISG
Sbjct: 74  NAVYANYCQHGQHEFMETIGINCDEVSRSGEALAVSELTIKFLAPLRSGCKFVVKTRISG 133

Query: 149 ISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDH 202
            S+ R Y +  IFKLPN EPILEAKG AVWL+K YRPV IP    S FG F + H
Sbjct: 134 TSMTRIYFEQFIFKLPNQEPILEAKGMAVWLDKRYRPVCIPSYIRSNFGHFQRQH 185

BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q9C7I8 (Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT2 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50
Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0

Query: 57  DLKAGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDG 116
           +L+   G+  F +IELKVRDYELDQFGVVNNAVYA+YCQHGRHE ++SIG++ + V+R G
Sbjct: 41  ELRGSTGIGGFHEIELKVRDYELDQFGVVNNAVYANYCQHGRHEFMDSIGINCNEVSRSG 100

Query: 117 DALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVW 176
            ALA+ EL++KFLAPLRSG +FVVK RISGIS+ R Y +  IFKLPN EPILEAKGTAVW
Sbjct: 101 GALAIPELTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFKLPNQEPILEAKGTAVW 160

Query: 177 LNKSYRPVRIPQEFLSKFGQFVQDH 202
           L+  YRP R+P    S FG F   H
Sbjct: 161 LDNKYRPTRVPSHVRSYFGHFQCQH 185

BLAST of CsGy5G024840 vs. NCBI nr
Match: XP_004135087.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus])

HSP 1 Score: 402 bits (1033), Expect = 3.16e-141
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA 60
           MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA
Sbjct: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA 60

Query: 61  GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA 120
           GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA
Sbjct: 61  GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA 120

Query: 121 LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS 180
           LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS
Sbjct: 121 LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS 180

Query: 181 YRPVRIPQEFLSKFGQFVQDHESK 204
           YRPVRIPQEFLSKFGQFVQDHESK
Sbjct: 181 YRPVRIPQEFLSKFGQFVQDHESK 204

BLAST of CsGy5G024840 vs. NCBI nr
Match: KAE8648792.1 (hypothetical protein Csa_009266 [Cucumis sativus])

HSP 1 Score: 400 bits (1028), Expect = 2.23e-133
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA 60
           MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA
Sbjct: 352 MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKA 411

Query: 61  GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA 120
           GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA
Sbjct: 412 GKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALA 471

Query: 121 LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS 180
           LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS
Sbjct: 472 LSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKS 531

Query: 181 YRPVRIPQEFLSKFGQFVQDHES 203
           YRPVRIPQEFLSKFGQFVQDHES
Sbjct: 532 YRPVRIPQEFLSKFGQFVQDHES 554

BLAST of CsGy5G024840 vs. NCBI nr
Match: XP_008446607.1 (PREDICTED: acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucumis melo])

HSP 1 Score: 375 bits (963), Expect = 1.54e-130
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 1   MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 60

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 61  AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 180

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           +YRPVRIPQEFLSKFGQFVQDHE K
Sbjct: 181 NYRPVRIPQEFLSKFGQFVQDHECK 205

BLAST of CsGy5G024840 vs. NCBI nr
Match: KAA0034568.1 (acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa])

HSP 1 Score: 375 bits (963), Expect = 1.78e-125
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 351 MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 410

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 411 AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 470

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 471 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 530

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           +YRPVRIPQEFLSKFGQFVQDHE K
Sbjct: 531 NYRPVRIPQEFLSKFGQFVQDHECK 555

BLAST of CsGy5G024840 vs. NCBI nr
Match: TYK09120.1 (acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa])

HSP 1 Score: 373 bits (958), Expect = 7.78e-123
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 351 MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 410

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 411 AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 470

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 471 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 530

Query: 181 SYRPVRIPQEFLSKFGQFVQDHE 202
           +YRPVRIPQEFLSKFGQFVQDHE
Sbjct: 531 NYRPVRIPQEFLSKFGQFVQDHE 553

BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A1S3BG49 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489290 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 7.46e-131
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 1   MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 60

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 61  AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 180

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           +YRPVRIPQEFLSKFGQFVQDHE K
Sbjct: 181 NYRPVRIPQEFLSKFGQFVQDHECK 205

BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 8.64e-126
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 351 MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 410

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 411 AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 470

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 471 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 530

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           +YRPVRIPQEFLSKFGQFVQDHE K
Sbjct: 531 NYRPVRIPQEFLSKFGQFVQDHECK 555

BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A5D3CCR4 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001110 PE=4 SV=1)

HSP 1 Score: 373 bits (958), Expect = 3.77e-123
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSS-FDLK 60
           MLQ+SITPIQSP PIF++KTNGFP PPSVVFP AR STSLRL+SLP TRSSISSS FDLK
Sbjct: 351 MLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSSSFDLK 410

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD+FLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 411 AGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 470

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 471 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKLPNMEPILEAKGTAVWLNK 530

Query: 181 SYRPVRIPQEFLSKFGQFVQDHE 202
           +YRPVRIPQEFLSKFGQFVQDHE
Sbjct: 531 NYRPVRIPQEFLSKFGQFVQDHE 553

BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A6J1HST6 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467460 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 7.83e-117
Identity = 174/205 (84.88%), Postives = 184/205 (89.76%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPS-TSLRLRSLPATRSSISSSFDLK 60
           MLQ+SI PIQSP P F+ KT G   P S+V PI+RPS TSLRLRS   TRSSISSSF LK
Sbjct: 1   MLQASINPIQSPPPAFHYKTAGLAFPSSLVCPISRPSPTSLRLRSPSVTRSSISSSFQLK 60

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD FLD+ELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL
Sbjct: 61  AGKGMDGFLDVELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPL+SGD+FVVKVRISG+S ARFYIDH IFKLPNMEPILEAK TAVWLNK
Sbjct: 121 ALSELSLKFLAPLKSGDRFVVKVRISGMSAARFYIDHFIFKLPNMEPILEAKATAVWLNK 180

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           SYRPVRIPQEF SKF QFV+DH+SK
Sbjct: 181 SYRPVRIPQEFQSKFAQFVRDHDSK 205

BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A6J1G0B9 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449530 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 3.55e-113
Identity = 168/205 (81.95%), Postives = 182/205 (88.78%), Query Frame = 0

Query: 1   MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPS-TSLRLRSLPATRSSISSSFDLK 60
           MLQ+SI PI+SP P F+ KT G  +P S+   I+RPS TSLRLRS   TR+SISSSF LK
Sbjct: 1   MLQASINPIRSPPPAFHYKTAGLALPSSLSCTISRPSPTSLRLRSSSVTRTSISSSFQLK 60

Query: 61  AGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDAL 120
           AGKGMD FLD+ELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPD VARDGDAL
Sbjct: 61  AGKGMDGFLDVELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDEVARDGDAL 120

Query: 121 ALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNK 180
           ALSELSLKFLAPL+SGD+FV+KVRISG+S A FYIDH IFKLPNMEPILEAKGTAVWLNK
Sbjct: 121 ALSELSLKFLAPLKSGDRFVLKVRISGMSAAHFYIDHFIFKLPNMEPILEAKGTAVWLNK 180

Query: 181 SYRPVRIPQEFLSKFGQFVQDHESK 204
           SYRPVRIP EFLSKF QFV+DH+SK
Sbjct: 181 SYRPVRIPHEFLSKFAQFVRDHDSK 205

BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G68260.1 (Thioesterase superfamily protein )

HSP 1 Score: 228.8 bits (582), Expect = 4.0e-60
Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 0

Query: 24  PVPPSVVFPIA-RPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQF 83
           P  P+VVF  + R   S+ LRS+   +    + FDLK GKGM  F ++ELKVRDYELDQF
Sbjct: 11  PAMPAVVFLNSWRRPLSIPLRSVKTFKP--LAFFDLKGGKGMSEFHEVELKVRDYELDQF 70

Query: 84  GVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKV 143
           GVVNNAVYA+YCQHGRHE LESIG++ D VAR G+ALA+SEL++KFL+PLRSGDKFVVK 
Sbjct: 71  GVVNNAVYANYCQHGRHEFLESIGINCDEVARSGEALAISELTMKFLSPLRSGDKFVVKA 130

Query: 144 RISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHE 203
           RISG S AR Y DH IFKLPN EPILEAKG AVWL+  YRPVRIP    SKF  F++  +
Sbjct: 131 RISGTSAARIYFDHFIFKLPNQEPILEAKGIAVWLDNKYRPVRIPSSIRSKFVHFLRQDD 189

BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G68280.1 (Thioesterase superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-54
Identity = 110/177 (62.15%), Postives = 128/177 (72.32%), Query Frame = 0

Query: 28  SVVFPIA-RPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVN 87
           SVVFP + R    L LRS  A      +  DLK GK M  F ++ELKVRDYELDQFGVVN
Sbjct: 13  SVVFPTSWRQPVMLPLRS--AKTFKPHTFLDLKGGKEMSEFHEVELKVRDYELDQFGVVN 72

Query: 88  NAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISG 147
           NAVYA+YCQHG HE LESIG++ D VAR G+ALA+SEL++ FLAPLRSGDKFVVKV IS 
Sbjct: 73  NAVYANYCQHGMHEFLESIGINCDEVARSGEALAISELTMNFLAPLRSGDKFVVKVNISR 132

Query: 148 ISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHES 204
            S AR Y DH I KLPN E ILEAK T VWL+  +RPVRIP    SKF  F++ +++
Sbjct: 133 TSAARIYFDHSILKLPNQEVILEAKATVVWLDNKHRPVRIPSSIRSKFVHFLRQNDT 187

BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G35290.1 (Thioesterase superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53
Identity = 109/175 (62.29%), Postives = 129/175 (73.71%), Query Frame = 0

Query: 29  VVFPI--ARPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVN 88
           VVFP   +RP   L LRS    +    S F  + GKGM+   +IELKVRDYELDQFGVVN
Sbjct: 14  VVFPCFSSRP-LILPLRSTKTFKP--LSCFKQQGGKGMNGVHEIELKVRDYELDQFGVVN 73

Query: 89  NAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISG 148
           NAVYA+YCQHG+HE +E+IG++ D V+R G+ALA+SEL++KFLAPLRSG KFVVK RISG
Sbjct: 74  NAVYANYCQHGQHEFMETIGINCDEVSRSGEALAVSELTIKFLAPLRSGCKFVVKTRISG 133

Query: 149 ISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDH 202
            S+ R Y +  IFKLPN EPILEAKG AVWL+K YRPV IP    S FG F + H
Sbjct: 134 TSMTRIYFEQFIFKLPNQEPILEAKGMAVWLDKRYRPVCIPSYIRSNFGHFQRQH 185

BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G35250.1 (Thioesterase superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52
Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0

Query: 57  DLKAGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDG 116
           +L+   G+  F +IELKVRDYELDQFGVVNNAVYA+YCQHGRHE ++SIG++ + V+R G
Sbjct: 41  ELRGSTGIGGFHEIELKVRDYELDQFGVVNNAVYANYCQHGRHEFMDSIGINCNEVSRSG 100

Query: 117 DALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVW 176
            ALA+ EL++KFLAPLRSG +FVVK RISGIS+ R Y +  IFKLPN EPILEAKGTAVW
Sbjct: 101 GALAIPELTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFKLPNQEPILEAKGTAVW 160

Query: 177 LNKSYRPVRIPQEFLSKFGQFVQDH 202
           L+  YRP R+P    S FG F   H
Sbjct: 161 LDNKYRPTRVPSHVRSYFGHFQCQH 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
S4TE152.5e-6765.70Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=... [more]
Q8W5835.6e-5964.64Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thalia... [more]
F4HX803.5e-5362.15Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thalia... [more]
Q9C7I52.3e-5262.29Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thalia... [more]
Q9C7I81.2e-5064.83Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thalia... [more]
Match NameE-valueIdentityDescription
XP_004135087.13.16e-141100.00acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus][more]
KAE8648792.12.23e-133100.00hypothetical protein Csa_009266 [Cucumis sativus][more]
XP_008446607.11.54e-13093.17PREDICTED: acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucu... [more]
KAA0034568.11.78e-12593.17acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa][more]
TYK09120.17.78e-12393.60acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A1S3BG497.46e-13193.17acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo ... [more]
A0A5A7SVA08.64e-12693.17Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3CCR43.77e-12393.60Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1HST67.83e-11784.88acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita max... [more]
A0A6J1G0B93.55e-11381.95acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita mos... [more]
Match NameE-valueIdentityDescription
AT1G68260.14.0e-6064.64Thioesterase superfamily protein [more]
AT1G68280.12.5e-5462.15Thioesterase superfamily protein [more]
AT1G35290.11.6e-5362.29Thioesterase superfamily protein [more]
AT1G35250.18.9e-5264.83Thioesterase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 82..165
e-value: 1.6E-12
score: 47.5
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 55..200
e-value: 1.3E-32
score: 114.7
NoneNo IPR availablePANTHERPTHR31793:SF27ACYL-ACYL CARRIER PROTEIN THIOESTERASE ATL1, CHLOROPLASTIC-RELATEDcoord: 32..203
NoneNo IPR availablePANTHERPTHR317934-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBERcoord: 32..203
NoneNo IPR availableCDDcd005864HBTcoord: 70..178
e-value: 1.41639E-29
score: 103.84
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 65..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G024840.2CsGy5G024840.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
molecular_function GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity