CsGy5G024840 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTGTAAGGCAAATTATTTCCCACAAGACTATTTCTAATGCTTTCTAGACAACTTTGAAATAAGATTTAACATATTTGTAAGATGTGGGATTTGAACCCACGCCCTGAAGGACGAAAATTTAGGTGTGGCGGTTTAGACCACTCGACCACACTGACCCGCTAAATTCACAAACCCAATTCACTCCGATTGCCATTCTCAACAAATCCGCCGACGACAGCACAAGAATCCGCGCGATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGTACTTTCCACATTTCAGGAATTTTCAATCTATTTTTCCCATTTAGTATTCTCTGTTAAGATCTTTGACATATGTTGTCCCCCACGGCTTTTGCTCCGTCGACATTAGCGGCCTTCGCGCATTATGTCTCCCCGCCCCTTCTCTCGGGGAGAACAATTGCTAATGATTTTGATAATCGTTTCATGTTTACGAGTGTTGGATTTTTTTTTTTTTTTTATATATAGCTGCATCGGTTTCTACAATTAGGGGATGAATTCTTTTGATGTTTGCCCTTTGCATTGTAATTGTTGTTTCTGCTGAAATTGTCCTGAATTGATGTCTTTTGTTTTGGTTTGGATAAAATTATTGAAAAATGTTAGAGATTGAGCATGTAATACCTTGACCATGACAGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTAAAATCAAATATCCACTTCTTTGAAGCTTCTTAGTGATTATTTTTCTCAAATTTTTTTGCTCATTATTCTTATTTCTTCTACTGATCTTTGAGTGAATTGGGGTGACTTTATTTTCCCTCTCCAGGGTTCTGTTTCTTTATGCTGTTTTTTCTCTCACTCCCTCCTCTTTTTTTGGGGGGTATCTTTTCATTATTTCAGTGAGAAGATTGTATGTAAGTGTGGAGGGAGTCTTCACCGTTTCAAATGTTGGTGTTTGTTTGTGTCTAATGTGCTCAGAAATTATGTTTCAAGTTAATAAGCATTACATTTCATTGTAGCTTATAACCATTACGATTATTTCTTTTCTGGGGAAGTGGTTTTTAAGTAGTATAAATGGTTGATGCAAGAATCAATTACTTCAATAATAATATTTAGTTTGTAGACAGAATGCTGTTTGAAATCACCAAAAATTATTCTTTTCTGTTTTTGCTGAAGTTAACATTAAGATATCTTGACAATTCCATTTGTTCACTGAACTATATCCTTTTTTCATGATAGTTGATAAGTCTAAAATTTGAGGGGCATTTGTCTGGAAGATGTAAAATGTTGAATATTAATTGGTGTTCATCGGCTCAAAACTTTGAAGTGTTTCGATTGAGTTGGGAAATAGATCATAGAAGTACTATATTTCTCCCCCAAGATTTCAATCATTTTTCGGTTTTACCATGATTACTTGAACCTTACTATTCTCAAAGCGTTATTGCTGAATTCAAAACATGTTATATTTGATTTAAAAGACATTAAATCGAGGACTTAATCAGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAGTACGATATCTTTTGTAGTTAACATTGAATGACCGATAACTGATAGAACAATTTAAGCTATAAAAACAATTTATTTACTCAATATCTTACTACTCTTATATTGTCTTATGAATGCAACTAGAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGGTTGGTATTGGATCCTATAATTTGCCTAAGTATATCAACTTATCTGGATGATTGCGGTAACTTTATAATACCATTTCCTGTCTTGTTTTCTTTCCGTAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGATCAACTTTGAGATGATATTTTGTATCTTCTGGAGAAGGCTAAAATAGGAGGTACTCAGCACATATCTGATTCATATACCAAAGTCCATCCATAGTAATGAATATTCTTGCGTTTTCTCAAACTGTAGTTCATATACACACAACATCACTCTGATTTTCATAGGTTTTGCAGTGGTAAAAAGCATATTGTTCGATGAAACGAACTAACTGAACAAGATCTATTCCATAAGTTGTAGATTTTTATACAGGATAAAAGTTTCATACTGATATCCATCTTCTCCATCTGAGAAAGAAAAAAGTTGAAGCTTTTCATATTGGCACTCGAGAATATTTTCAAATACATAATATATATATATATATACACTGTTTTCACCACTTTGTAATTGAG AGTTTGTAAGGCAAATTATTTCCCACAAGACTATTTCTAATGCTTTCTAGACAACTTTGAAATAAGATTTAACATATTTGTAAGATGTGGGATTTGAACCCACGCCCTGAAGGACGAAAATTTAGGTGTGGCGGTTTAGACCACTCGACCACACTGACCCGCTAAATTCACAAACCCAATTCACTCCGATTGCCATTCTCAACAAATCCGCCGACGACAGCACAAGAATCCGCGCGATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGATCAACTTTGAGATGATATTTTGTATCTTCTGGAGAAGGCTAAAATAGGAGGTACTCAGCACATATCTGATTCATATACCAAAGTCCATCCATAGTAATGAATATTCTTGCGTTTTCTCAAACTGTAGTTCATATACACACAACATCACTCTGATTTTCATAGGTTTTGCAGTGGTAAAAAGCATATTGTTCGATGAAACGAACTAACTGAACAAGATCTATTCCATAAGTTGTAGATTTTTATACAGGATAAAAGTTTCATACTGATATCCATCTTCTCCATCTGAGAAAGAAAAAAGTTGAAGCTTTTCATATTGGCACTCGAGAATATTTTCAAATACATAATATATATATATATATACACTGTTTTCACCACTTTGTAATTGAG ATGTTGCAGTCTTCCATTACTCCGATTCAATCGCCCTCACCGATTTTCAATCAAAAAACTAATGGCTTCCCAGTCCCTCCATCAGTTGTCTTCCCCATTGCCCGGCCGTCGACATCTTTACGCCTACGATCTCTCCCAGCAACCAGAAGCTCTATCTCCTCTTCTTTTGATCTCAAAGCCGGCAAAGGGATGGATAGTTTTCTAGATATTGAACTCAAAGTTCGTGATTATGAGCTGGATCAATTTGGAGTTGTGAACAATGCTGTTTATGCAAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGTATAGGCCTCAGTCCAGATGCAGTTGCTCGTGATGGAGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTCGCACCACTTAGAAGTGGTGACAAATTTGTTGTTAAAGTGAGGATCTCGGGCATATCAGTTGCTCGCTTCTACATTGATCATTTAATTTTCAAGCTTCCAAATATGGAGCCAATCTTGGAGGCGAAGGGTACAGCAGTTTGGCTTAACAAAAGTTATCGCCCAGTGCGTATTCCACAAGAGTTTCTATCCAAATTTGGTCAATTTGTTCAAGATCACGAGTCCAAGTGA MLQSSITPIQSPSPIFNQKTNGFPVPPSVVFPIARPSTSLRLRSLPATRSSISSSFDLKAGKGMDSFLDIELKVRDYELDQFGVVNNAVYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFLSKFGQFVQDHESK* Homology
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: S4TE15 (Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=3486 GN=TE3 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.5e-67 Identity = 136/207 (65.70%), Postives = 156/207 (75.36%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q8W583 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT3 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.6e-59 Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: F4HX80 (Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT4 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.5e-53 Identity = 110/177 (62.15%), Postives = 128/177 (72.32%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q9C7I5 (Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT1 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.3e-52 Identity = 109/175 (62.29%), Postives = 129/175 (73.71%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy Swiss-Prot
Match: Q9C7I8 (Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT2 PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50 Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0
BLAST of CsGy5G024840 vs. NCBI nr
Match: XP_004135087.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus]) HSP 1 Score: 402 bits (1033), Expect = 3.16e-141 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsGy5G024840 vs. NCBI nr
Match: KAE8648792.1 (hypothetical protein Csa_009266 [Cucumis sativus]) HSP 1 Score: 400 bits (1028), Expect = 2.23e-133 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CsGy5G024840 vs. NCBI nr
Match: XP_008446607.1 (PREDICTED: acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucumis melo]) HSP 1 Score: 375 bits (963), Expect = 1.54e-130 Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of CsGy5G024840 vs. NCBI nr
Match: KAA0034568.1 (acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa]) HSP 1 Score: 375 bits (963), Expect = 1.78e-125 Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of CsGy5G024840 vs. NCBI nr
Match: TYK09120.1 (acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa]) HSP 1 Score: 373 bits (958), Expect = 7.78e-123 Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A1S3BG49 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489290 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 7.46e-131 Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 8.64e-126 Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A5D3CCR4 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001110 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 3.77e-123 Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A6J1HST6 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467460 PE=4 SV=1) HSP 1 Score: 340 bits (871), Expect = 7.83e-117 Identity = 174/205 (84.88%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of CsGy5G024840 vs. ExPASy TrEMBL
Match: A0A6J1G0B9 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449530 PE=4 SV=1) HSP 1 Score: 330 bits (847), Expect = 3.55e-113 Identity = 168/205 (81.95%), Postives = 182/205 (88.78%), Query Frame = 0
BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G68260.1 (Thioesterase superfamily protein ) HSP 1 Score: 228.8 bits (582), Expect = 4.0e-60 Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 0
BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G68280.1 (Thioesterase superfamily protein ) HSP 1 Score: 209.5 bits (532), Expect = 2.5e-54 Identity = 110/177 (62.15%), Postives = 128/177 (72.32%), Query Frame = 0
BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G35290.1 (Thioesterase superfamily protein ) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53 Identity = 109/175 (62.29%), Postives = 129/175 (73.71%), Query Frame = 0
BLAST of CsGy5G024840 vs. TAIR 10
Match: AT1G35250.1 (Thioesterase superfamily protein ) HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52 Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|