CsGy5G024780 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G024780
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L15, chloroplastic
Location	Gy14Chr5: 29271448 .. 29275331 (-)
RNA-Seq Expression	CsGy5G024780
Synteny	CsGy5G024780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAACTGTAAACATTCAGTTCCAGCTTATCCATGGCTGCCCTCTTTTCCTTATCTTCACCTTCCTTGACCAGAACAGCCACTGCTCTCCCTTATCCAACCACTTCCTTCAAGGTATATCACATTACCTTCCCTATTTCTTTCTTTACTTTCTTAATTTCAAATTCAACTCCTTATCTCACTTCAATTTCCTTCTGTGTTGATGCTTTTCCAGGGAAATGTTAATATTCTCAACTCAAAGCACCTCAGCATTTCTTCACTCAGACTCAAGTCTAAGTCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAAGCTGCTGCTTCTTCCCTGTCTGCCTCCCCCGCCGAGAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGGCAGGGCGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAGCTTAGAGGAATTGCAGGAGGTAATTTCTATCATTCTTCTGCTTAGTTGCCTTTTGTGTATGAATTCTACAACTCTTCGTATCTTAGCTTGCTAGTTTGGTGCAATCGCAATTGTTCATTCTGCTATTGATTATGGTTGCCTCATCGAGGGAGAGTTCAAATTATCTTTTGTAGTCTTATCCTGAAAACTTCCATTCCATTTATTTTTACCTATTTAGTGCTATAGATTATGGTTGCTTCATTGAGGGAGAGTTCCAATCATCTTTTTGACTCTTATCCTGAAAACGTAAGTTCCATTTATTTTTACCTATTTAGTGCTATAGACTATGGTTGCTTCATTGAGGGAGACTCGGAGCGTTCCAATTTTCTTTTCACCCTTATCCCAAAAACTTCCATTCCGTTTATTTTTACCTATTTAGTACTTGGCAGGTTGTTGGAGCAATGTTTGGAATTATTGCACTTGTAATTTATGTAATTCCTTATTCCTCGATGGAGGGCATTAGGCCTTTTTAGATTTCAGGAGGCTAGGGCAAGGGAGAAAAGTAGCCACTCCATAGGTGCACATCCATCTCCCGGTTGCTTGAAACGTAATCGATGCTTTGTATTGTGGTGTTTGGGCTAGAGTGACTAGGAAGCTGTTATGGTTCATGATGAAGATCTTCAAGTATCCCACAGCGTGGAAGATTGAATACTCTTCAAACTGGATATTGGAGACTGTTAATTTACTTTTTGCTTTCTTGGAAATGGTAATGATGTATAAATGAGATGGGGATTACGACAATGAGAGGAATAGATTGTCTCTCAACCTAGTCAAAAGAATTCAGAAAAGCTCTCATATTGGGTTGAGTGTCTAATGAAGTGTGATTTCTCAAGCTCCCATACAGAGTACAAAATCTATGGACCTAACAAAAATCTCTCTATAACGTAGTATCTTGTATAGTTATATCCTTGTTCTTGTTTACTAGCTATGCCTTTGGTTAGAATGGTTAGTCTATGAGAGGTATTTCAATCTCATGTAAAGAGTGGATTTTACCGATTTCCTTTTGGTTTAGCTCTGTGGGAGGGGGTTTCCTCTACCCCCTGCCCTTAGGTTTTTCTGTCAGCTATCTTGATGAATATATTCCAATGTTTTTTTTATTAAAAGAAAGCTGTTTTTCTCTTCCCATTTCTCTTCTCATTCTTTACTCTATCTTTTCATAAAAAGAACACTCCAAGATGATATATCGTGTATTGTATTTGTTTTTCTTGTGGTCACCTTTGTTTGAACTCAAGATATTCGAGCTGAACAATTGCTTTTGCTTTCAAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTTAAAGACATTGAAGAGGCGGGATTTCAGGAAGGGGAAGAGGTATCTTTGGAATCTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGGTACCAATGTCACAAATATCTACATTGTTAAGATCACACAAGTTGATATGAAAATTTGATGTGTGATGCACTTTTCTACTCCAAGTGAAATGAAAACTGGGTGATTTAAACAGATGTCTCTTAAATGATCGAAGTTCTGGTGACTGATTCATATTGTTTAACTTTATCTTTCCTTCAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAACATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCCTAACTGTTTTACCTGGCCGAAAGAAATGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCAGAGGAATACTTTGCAAAGAAAAAGGCTGCAGCAGCTGCTGCAGAACAGGCATCTGCTTGAATAATTGTAAAGTTGCAGTTGGTGACAAATTCCAGGTTAAATCTCTTCCTTAGTAAGTTTGGGCCTTAGCTAGTTTGTGGGCTTTAAGTCCAATTCAATGCTGTCTGATTGTATTATTGATTGATTTCAAGAGCAAAATTTTCTCTGAAATATTCGTGTTCTCTCTTACTTTAAACTACCAGAAAAGAGTAAAAGCAATTTTCTTTTTCTTTCTTTTTCTTTTTATAAAAAAGTCAATTCAGAAATAGCCCATTTCCAGAACTAGTTTAAGTGGATTAGGCTTATACTCACGAGTTTTGACCAAGAGGTAAGAGGTTTTTGGATCTCATCAAATCTCACCAATCCCAAATCTAATTCAACTAACAAAAATAAGAAGAAGAAAAAACTCATAAATAGCGCTTTGAATATGAGTTGACTAGCGTGGAGAAGAGGAAACCAAGTATGGATGATTCAGTTAATCTAGTCGTTTCCATCATTCTCAATCATGTCATCCACTGAGGTACGAGTCTAGTCTTGGACCCATTCAAAATTTCTGCTTATCTAAACTAACCAAATCCGGATCAGTGGACATTTCTGATAAGCTGAACTGTTCAACTTTAAAATTGATTTGTATTGTTTAAAAATATTGCAAAATAGAATTAGACTAGGGAGAAAAAGTATATTTAAATCAGAGCTATCCTTTTTAGCATATGGGTAGGAATTTCTATAGGGCTATGGAAGTTGATCCTACTTGGATACTAGGAATCTGGTACAGGATAGTAATAGTCAAATTGGAACGTGTGAATTTTGAAATTTGTGTTAAGTTTCTCACGATTGATTGGTTCAATAAGTAATGTGCACTGTTGTTTTGGATGCAAGGCATGTGCTTTATTAATCACATATTGCTGGATGACTCATTTTCTCTCATGTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTGCCCTTTCTCCATTATTCTAATAACTTTGGATTTTCTTTCCATCTCTTTTACTCTCTTTCTCTCTCCAAAGCTTTGTTTTGATGTAAAATCCAAGTACCCACGAGCCAAAAATGATAAGTCTTTCCAAACAAACTAGGTCAATTCTGTCTTCCAAAACCCACAGAAATCCTTCATCAGTTTGCCCGTTACATACACTTTCACAATATGCCGACTACGCCCTCTCTATATAACTTTATGAGGAACTTGTTGTTAATTAGTGTTGAGTATCTTATATTGCTGATGAACACAATGGAGTTGAAGCTTTACACGTTTTCTTTGACCAAATTTAGTGGACTTCCACGTGGAAGTCCACATTCTTGTTTTCCTTTTTTATTCATTTCTTTCTAGTACCATCCTTAGAGTTTAGACCATTCTGATTACAATATTTAAGGTATTTTTTTTAGTTCAGCGAATGGTCGATTGAACTATGGACTTCAAAATAGTAATGAGTATGTATCCAC

mRNA sequence

GTCAACTGTAAACATTCAGTTCCAGCTTATCCATGGCTGCCCTCTTTTCCTTATCTTCACCTTCCTTGACCAGAACAGCCACTGCTCTCCCTTATCCAACCACTTCCTTCAAGGGAAATGTTAATATTCTCAACTCAAAGCACCTCAGCATTTCTTCACTCAGACTCAAGTCTAAGTCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAAGCTGCTGCTTCTTCCCTGTCTGCCTCCCCCGCCGAGAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGGCAGGGCGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAGCTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTTAAAGACATTGAAGAGGCGGGATTTCAGGAAGGGGAAGAGGTATCTTTGGAATCTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAACATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCCTAACTGTTTTACCTGGCCGAAAGAAATGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCAGAGGAATACTTTGCAAAGAAAAAGGCTGCAGCAGCTGCTGCAGAACAGGCATCTGCTTGAATAATTGTAAAGTTGCAGTTGGTGACAAATTCCAGGTTAAATCTCTTCCTTAGTAAGTTTGGGCCTTAGCTAGTTTGTGGGCTTTAAGTCCAATTCAATGCTGTCTGATTGTATTATTGATTGATTTCAAGAGCAAAATTTTCTCTGAAATATTCGTGTTCTCTCTTACTTTAAACTACCAGAAAAGAGTAAAAGCAATTTTCTTTTTCTTTCTTTTTCTTTTTATAAAAAAGTCAATTCAGAAATAGCCCATTTCCAGAACTAGTTTAAGTGGATTAGGCTTATACTCACGAGTTTTGACCAAGAGGTAAGAGGTTTTTGGATCTCATCAAATCTCACCAATCCCAAATCTAATTCAACTAACAAAAATAAGAAGAAGAAAAAACTCATAAATAGCGCTTTGAATATGAGTTGACTAGCGTGGAGAAGAGGAAACCAAGTATGGATGATTCAGTTAATCTAGTCGTTTCCATCATTCTCAATCATGTCATCCACTGAGGTACGAGTCTAGTCTTGGACCCATTCAAAATTTCTGCTTATCTAAACTAACCAAATCCGGATCAGTGGACATTTCTGATAAGCTGAACTGTTCAACTTTAAAATTGATTTGTATTGTTTAAAAATATTGCAAAATAGAATTAGACTAGGGAGAAAAAGTATATTTAAATCAGAGCTATCCTTTTTAGCATATGGGTAGGAATTTCTATAGGGCTATGGAAGTTGATCCTACTTGGATACTAGGAATCTGGTACAGGATAGTAATAGTCAAATTGGAACGTGTGAATTTTGAAATTTGTGTTAAGTTTCTCACGATTGATTGGTTCAATAAGTAATGTGCACTGTTGTTTTGGATGCAAGGCATGTGCTTTATTAATCACATATTGCTGGATGACTCATTTTCTCTCATGTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTGCCCTTTCTCCATTATTCTAATAACTTTGGATTTTCTTTCCATCTCTTTTACTCTCTTTCTCTCTCCAAAGCTTTGTTTTGATGTAAAATCCAAGTACCCACGAGCCAAAAATGATAAGTCTTTCCAAACAAACTAGGTCAATTCTGTCTTCCAAAACCCACAGAAATCCTTCATCAGTTTGCCCGTTACATACACTTTCACAATATGCCGACTACGCCCTCTCTATATAACTTTATGAGGAACTTGTTGTTAATTAGTGTTGAGTATCTTATATTGCTGATGAACACAATGGAGTTGAAGCTTTACACGTTTTCTTTGACCAAATTTAGTGGACTTCCACGTGGAAGTCCACATTCTTGTTTTCCTTTTTTATTCATTTCTTTCTAGTACCATCCTTAGAGTTTAGACCATTCTGATTACAATATTTAAGGTATTTTTTTTAGTTCAGCGAATGGTCGATTGAACTATGGACTTCAAAATAGTAATGAGTATGTATCCAC

Coding sequence (CDS)

ATGGCTGCCCTCTTTTCCTTATCTTCACCTTCCTTGACCAGAACAGCCACTGCTCTCCCTTATCCAACCACTTCCTTCAAGGGAAATGTTAATATTCTCAACTCAAAGCACCTCAGCATTTCTTCACTCAGACTCAAGTCTAAGTCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAAGCTGCTGCTTCTTCCCTGTCTGCCTCCCCCGCCGAGAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGGCAGGGCGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAGCTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTTAAAGACATTGAAGAGGCGGGATTTCAGGAAGGGGAAGAGGTATCTTTGGAATCTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAACATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCCTAACTGTTTTACCTGGCCGAAAGAAATGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCAGAGGAATACTTTGCAAAGAAAAAGGCTGCAGCAGCTGCTGCAGAACAGGCATCTGCTTGA

Protein sequence

MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQASA*

Homology

[Close]

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot
Match: P22798 (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 335.1 bits (858), Expect = 7.3e-91
Identity = 184/272 (67.65%), Postives = 223/272 (81.99%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSV---DGKHLVV 60
           MA+L SLSS +   TA +  YP+++FKGN+N       + + L+L  +++   +   LVV
Sbjct: 1   MASLLSLSS-TPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60

Query: 61  RNQAAASSLSAS--PAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKS 120
              A++S++S S       RFRLDNLGPQPGSRK+GKRKGRG +AGQGGSCGFGMRGQKS
Sbjct: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE 180
           RSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EGEEVSLE
Sbjct: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180

Query: 181 SLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRK 240
           SLK KG+INPSGRER+LPLKIL +GELS KL IKARAFS +AKEKLEAAGCS+TVLPGRK
Sbjct: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240

Query: 241 KWVKPSVAKNLARAEEYFAKKKAAAAAAEQAS 268
           K++K SV KNLARA+EYFAKK+AA+A+  +++
Sbjct: 241 KYIKESVRKNLARADEYFAKKRAASASEAESA 271

[Close]

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot
Match: P25873 (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 331.3 bits (848), Expect = 1.0e-89
Identity = 188/270 (69.63%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 1   MAALFSLSSPSLT-RTATALPYPTTSFKGNVNILNSKHLSISSLRL------KSKSVDGK 60
           MA   S+SS  LT R    L   +TSFKGNV++L +    I SL+L      +++    +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  HLVVRNQAAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQ 120
            LVV +Q AA+S +    E  RFRLDNLGPQPGSRK+ KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATSSAVVAPE--RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARAEEYFAKKKAAAAAA 264
           RKKWVKPSVAKN ARA+EYFAKK+AAAA A
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEA 268

[Close]

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot
Match: P31165 (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.2e-89
Identity = 181/250 (72.40%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 17  TALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENVRF 76
           ++LP   + FKGNV  L +K      L+++   +    + V N+AA++    S  ENVRF
Sbjct: 10  SSLPSLASPFKGNVKTLVAKPCLCPCLKIQRTKL---RVSVVNKAASAYNVKSSGENVRF 69

Query: 77  RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           RLDNLGPQPGSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQMPLYRR+
Sbjct: 70  RLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRL 129

Query: 137 PKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKI 196
           PKLRGIAGGMHAGLPKYV VNL DIE AGFQ+GEEVSLE+LK K +INPSGRERKLPLKI
Sbjct: 130 PKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKI 189

Query: 197 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKK 256
           LADGELS KL IKA AFS++AKEKLE AGCSL VLPGRKKWVKPSVAKNLARAEEYFAKK
Sbjct: 190 LADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKK 249

Query: 257 KAAAAAAEQA 267
           +    A+E A
Sbjct: 250 RGGETASEPA 256

[Close]

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot
Match: P31160 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-33
Identity = 86/158 (54.43%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 77  RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQPG++KR +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot
Match: Q5N0U8 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-33
Identity = 86/158 (54.43%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 77  RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQPG++KR +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of CsGy5G024780 vs. NCBI nr
Match: XP_004135093.1 (50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypothetical protein Csa_008981 [Cucumis sativus])

HSP 1 Score: 499 bits (1286), Expect = 1.16e-177
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268
           SVAKNLARAEEYFAKKKAAAAAAEQASA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268

[Close]

BLAST of CsGy5G024780 vs. NCBI nr
Match: XP_008446604.1 (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605.1 PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo])

HSP 1 Score: 481 bits (1239), Expect = 1.69e-170
Identity = 258/268 (96.27%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAALFSLSS SLTRTATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQ
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASPA+NVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268
           SVAKNLARAEEYFAKKKAAAAAAEQ+SA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQSSA 268

[Close]

BLAST of CsGy5G024780 vs. NCBI nr
Match: XP_038891383.1 (50S ribosomal protein L15, chloroplastic [Benincasa hispida])

HSP 1 Score: 461 bits (1187), Expect = 1.27e-162
Identity = 248/263 (94.30%), Postives = 252/263 (95.82%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAAL SLSS SLTRTATALPYPTTSFKGNV ILN K L+ISSLRLK K  DGKHLVVRNQ
Sbjct: 1   MAALLSLSSTSLTRTATALPYPTTSFKGNVKILNPKQLTISSLRLKFKVGDGKHLVVRNQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           A ASSLSASP E+VRFRLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  APASSLSASPVESVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAA 263
           SVAKNLARAEEYFAKKKAAAA A
Sbjct: 241 SVAKNLARAEEYFAKKKAAAATA 263

[Close]

BLAST of CsGy5G024780 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 462 bits (1189), Expect = 1.77e-161
Identity = 245/254 (96.46%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 15  TATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENV 74
           TATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQAAASSL ASPA+NV
Sbjct: 105 TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 164

Query: 75  RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 134
           RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR
Sbjct: 165 RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 224

Query: 135 RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPL 194
           RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEKGLINPSGRERKLPL
Sbjct: 225 RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 284

Query: 195 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 254
           KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA
Sbjct: 285 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 344

Query: 255 KKKAAAAAAEQASA 268
           KKKAAAAAAEQ+SA
Sbjct: 345 KKKAAAAAAEQSSA 358

[Close]

BLAST of CsGy5G024780 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 451 bits (1159), Expect = 2.52e-158
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL
Match: A0A0A0KUI5 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 499 bits (1286), Expect = 5.61e-178
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268
           SVAKNLARAEEYFAKKKAAAAAAEQASA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268

[Close]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL
Match: A0A1S3BFG1 (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 8.17e-171
Identity = 258/268 (96.27%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAALFSLSS SLTRTATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQ
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASPA+NVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQASA 268
           SVAKNLARAEEYFAKKKAAAAAAEQ+SA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQSSA 268

[Close]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 8.58e-162
Identity = 245/254 (96.46%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 15  TATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQAAASSLSASPAENV 74
           TATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQAAASSL ASPA+NV
Sbjct: 105 TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 164

Query: 75  RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 134
           RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR
Sbjct: 165 RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 224

Query: 135 RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPL 194
           RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEKGLINPSGRERKLPL
Sbjct: 225 RIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 284

Query: 195 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 254
           KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA
Sbjct: 285 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 344

Query: 255 KKKAAAAAAEQASA 268
           KKKAAAAAAEQ+SA
Sbjct: 345 KKKAAAAAAEQSSA 358

[Close]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL
Match: A0A6J1J6D0 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482969 PE=3 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 1.22e-158
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL
Match: A0A6J1H0G5 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458464 PE=3 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 4.07e-157
Identity = 242/266 (90.98%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60
           MAAL SLSS SLTRTA ALP+PTT FKGNV ILNSK  S S L+LK K  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]

BLAST of CsGy5G024780 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 331.3 bits (848), Expect = 7.5e-91
Identity = 188/270 (69.63%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 1   MAALFSLSSPSLT-RTATALPYPTTSFKGNVNILNSKHLSISSLRL------KSKSVDGK 60
           MA   S+SS  LT R    L   +TSFKGNV++L +    I SL+L      +++    +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  HLVVRNQAAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQ 120
            LVV +Q AA+S +    E  RFRLDNLGPQPGSRK+ KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATSSAVVAPE--RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARAEEYFAKKKAAAAAA 264
           RKKWVKPSVAKN ARA+EYFAKK+AAAA A
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEA 268

[Close]

BLAST of CsGy5G024780 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 88  RKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMH 147
           RK   RKGRGI +G+G + G G +GQK+R    ++ GFEGGQ PL RR+PK RG      
Sbjct: 75  RKLKTRKGRGIGSGKGKTAGRGHKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFK 134

Query: 148 AGLPKYVPVNL----KDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELS 207
                + PV L    K I        E +++++LK+ G I   G++ +  ++++  G   
Sbjct: 135 L---HFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADD 194

Query: 208 VK--LNIKARAFSSAAKEKLEAAGCSL 229
           +K  L+ +    +  AKE +EAAG S+
Sbjct: 195 IKWPLHFEVSRVTVRAKEVVEAAGGSV 212

The following BLAST results are available for this feature:

BLAST of CsGy5G024780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P22798	7.3e-91	67.65	50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P...	[more]
P25873	1.0e-89	69.63	50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31165	5.2e-89	72.40	50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=...	[more]
P31160	3.1e-33	54.43	50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0U8	3.1e-33	54.43	50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]

BLAST of CsGy5G024780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135093.1	1.16e-177	100.00	50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypotheti...	[more]
XP_008446604.1	1.69e-170	96.27	PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605...	[more]
XP_038891383.1	1.27e-162	94.30	50S ribosomal protein L15, chloroplastic [Benincasa hispida]	[more]
KAA0034559.1	1.77e-161	96.46	50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p...	[more]
XP_022984826.1	2.52e-158	91.73	50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CsGy5G024780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUI5	5.61e-178	100.00	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A1S3BFG1	8.17e-171	96.27	50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288...	[more]
A0A5D3CCS9	8.58e-162	96.46	50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1J6D0	1.22e-158	91.73	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1H0G5	4.07e-157	90.98	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsGy5G024780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25920.1	7.5e-91	69.63	ribosomal protein L15	[more]
AT5G64670.1	1.6e-08	35.37	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 102..229 e-value: 3.1E-31 score: 108.7
None	No IPR available	GENE3D	3.100.10.10		coord: 153..230 e-value: 3.6E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..126
None	No IPR available	PANTHER	PTHR12934:SF13	BNAA06G33230D PROTEIN	coord: 9..263
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 78..228 e-value: 3.6E-39 score: 131.8
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 9..263
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 195..225
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 78..231 score: 18.703541
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 79..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G024780.2	CsGy5G024780.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome