CsGy5G024750 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G024750
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 29255186 .. 29258785 (-)
RNA-Seq Expression	CsGy5G024750
Synteny	CsGy5G024750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCAAAGGATTTGCAAAACCGCGTACGTACCACATTCTTCTATTTCATTTGTTCTCAATTCTCTGTTTTACAATATCATTCTTTTGTAACATATATATGATGAGGTGAACTATCAGTTTGAAGTTTACATTCCTCCAATGTTTCTTTCTGGATAATGTTTCACATTTTGCGTTGGAGTTCATTATATAGCGTTACGTGTGAGCATTAGTTTCTTAAGCTTCGGCTTCGTAGATTATTTTTTGAGTAACCTATATGTTGAGAAAATATGCTCATTCTACCAAATTCTTGATGCTTTTTGTTAGCGTGAGTATACTGAGCATATTCCAGACATAGGGGAATCGTTATTGGCTTAACATTCTTGAACTTCTTTTAACGAATGTTTGGATTTTTGGACCTTAATAACTATGAAGGAGAAGATTAGGACAAAGATTACGGTGATAGAAAAAATCTTCATTCTATTAACTAGTTTCTGAATACATAAATGAAATAGTAGAGACAACTTTTGAATAGTGGGGTCAGTTATTTATACTCTCTAGTGTTTTTGGTGGAATGTATATTTAACAAAGTAGGCCTACAATTAATCAATCCAAACATGCTATAAATTTCGCACTTCTTTTGTTGTTCAGGCAGTTTTAGGATTATGGGGGCCGTTCTTTCAATTTCATAGACGTGGCTCTTGTTTCAGAATCAAAGTTAGATCGAATTATATCACTCCAAGTCAGCAAATTTTGGGATGTTCAAATGAAAGAGAGAAATAAGAGAATTTTGATGGAGGCTTGAAAGTTAGGTCATGTTTGACATTTATATCTACTAGATTTCCGCTTGGAAAGTTCATTATGTTTGTGCCAAATTCCAAGCTTTTTTTAGGTTCCTTCTCTAGGAAGGGTTCTTACCCTTTTATAGCCTTCTAGGGTTCCTTGATAATTTCCTCTTAATTCTTAATTTTTTTCATACAAAAATTCCCTTACCCCAAATCAATTAATTGTTTCTTATTAAAGTAAGTGGGACACAACTTTTTAATTAAACACTCAAAACCTATATTAACTTTTATTACTGTCTTGTCTGCTGAAGCTCATATATCAGAGAGAAAGGCTTAGGAGAAAGCTCGCACAAAAGAATACAGACCTTTTTGCATCATTTTCCAAAAGCTTAGAACCTACTGTTATGTAACCCATGTGAATCAATATTAATTTTATCGTTAAAGATTCTGTTGCTCAAGTTGTATTTGTTTGTCATGGCTGTTATAGCAGTTTCTTTTATCCATTTATTAGCGCTTTAAATCACTCTGATGCATGAGGAAAAATTCACTCTCTCTTTCACTTATGTGAAGGTTTCTCACTAACTAATCCTTTCTCTCTAATCTAGATGAAAATATTTTTTAAAAAATTCAATTTGTCCCAATACGAAAGAGAAAAAAGAAAAGTCAAAAAGCTATAACTTGCGCTAAGTTTGGAAAACCTACTCGTTATTAGTTAGGAAATTGGTAAAGAATTAGATCTCTCATTACTTAAAAATGCAGAAATTTTTGGAATACCATTATTAGTTATGCGATTGATTTGGCACCAACGAATTCCTATTTTGTGACTGGGAAGAGCACTTACTTAGTGGTTAGTCCATCTTAACTTCTTGAGTTACGTTTGGCTTTAATCGTACACTACGTACTAATAAATATTTCTTTGTATAATGAGTATGCTTTGGGGCTAGAACTCCAGGACCCAGGAATCCATTGGGTGGATCTTTGTAGATCTAGGTGCTGATATTGATAAGCAGGCAAAAGTTACAATCTTTCTTCATTACAAATAAATAGCCATGCTTCAGATGGAGCTAAAGTTCCTTTATAAGATAATCAACCCTTAATGAACTTACATTTTGCCTAAGCAAAAAAATTTCAATTGGCATTTTGTTATTTGATTTCTTGTGTTGTACTAGGAAGGCCCCCCACTGTGTTTCATATGTGACCCTGCCTTTGCTAGAGAGGTGGATGGCCTGGACAGTATCACGTGATTAGAAGAGTGATATTAAAGGATAAATGTCCCCTCTTTTTGTCCTCCATTCCAGTGTATATGTACAAGTTAGTCCTTTCGTCTTCCTCAAACTACTATAATCAGCTCTAGCCATGGTTTAGAAATAACGCTCAAACTTGTAAAAATTGATGATTTTATATCAAGTAATAAAGGCATATTCCCTATTGATATTTTTGGGAGTGATAATAAATTCTTCCATGTGCCACCCTCCAAGTATAATAAAGTTCCGTTCGGTTTAACAGGCCGAAGTGCTAATTTTATCAATTACTTGCATAGAAATGTATCTACAAAATCATTTCGATTCAAACTTCCAATATTTCCTTTTGAATTTGAGTTTCACCATCAATTAGTAATTTCTGCCTTTAAAATGGGTACAGCATCAGTTTCACTTATTCGTATCTGATACAGGGCACCCAGGTATAGACATGAAAAGGTGAACAGAACCTATTTTACGTAAGATTCTGAATCTCTGATGTTGCTATCCGTAATGTAATTGATTCTTCCTTAATTCTCCTCACTAGTGAATCACTACTTATGGAATGCTACAATGTGCATATCTTTTGGCAGATCCTTCTCTCCTTGAAAAAAAAAATCATGTCTGGTCCAGTACTTCATTTTACTTTATCCTGGTGACGATTGCCAAGCGAACAATTCTGGAAAATTAAAACCTCCTCGAGAATTTAGAATCTTTTGGGTGCACAGTCATTGAATACAAACTTCAACCAATTCGTGAAAGTTCAATTTTTTATATCGAAATCTTCTTTCAGGATGACTTATCTGGTTGTAGAAGCTTGAGTAATTGCAGGTACATATTCAATTAATTATGCATATCTAATTTACCCAGTACAAGGGAGGGATTTTTGCACAGAACATCTCAAGTAAAACACTGCCTAAAGGTGTTTTTATTGATGGGGGCTTAGTTCATGGTCTCAAATTGAAGTTTTGCAGCCATGCTTCTGAAAAATTCACTATTAAACGTACTTCACAAAGGTTACAGTAGCAAATTTATCTTCTAACGCAAGTCGTACAAATCCAGTGGTCAGAATATGGCAACCTATGCTTAAAATCCACCCCATCACCTTCACTTCTGGCCTCTGGGTATATTAATGATTTGTATCTCTGTTGTTGCGCCTTTAATTTAACTTGTAGGCACTGTTTCTCTAATTATATATTATGGAGTATGATCAGGGTGCGTATAAATTGATGGTGTTCCCAAGAGCTTTTGAAGTGGTAATTAAGCCAAATTTAGAAGACTATGTATATAATATCAATGAAATCTATCATTTACATTATAAATATAATATAACTAACAGTAGACTGTCATATATTAGCTTTATTGGTGGGGATTGGAAGGAGTAGGTTGATTAAAATTTAAGCAAAGAACATTTCAGGCAGTTTGTTACTTTTTGGAGTCAGAGGCAGCGCGTGTTGTAGTTTTGGTTAAATATAAAAGAAAACTAAGCTTGTAGTGTTGTGTATATGTAATTTGATGTGAATAGGTAAAGAAAGAAAAGAATGTAATTGGAATTTTAGAAGCTGTCAAGTCTGAAGAGGTTGAAATTCAATATTGA

mRNA sequence

ATGACGTCAAAGGATTTGCAAAACCGCGGCACCCAGTACTTCATTTTACTTTATCCTGGTGACGATTGCCAAGCGAACAATTCTGGAAAATTAAAACCTCCTCGAGAATTTAGAATCTTTTGGGATGACTTATCTGGTTGTAGAAGCTTGAGTAATTGCAGTCGTACAAATCCAGTGGTCAGAATATGGCAACCTATGCTTAAAATCCACCCCATCACCTTCACTTCTGGCCTCTGGGGTGCGTATAAATTGATGGTGTTCCCAAGAGCTTTTGAAGTGGTAAAGAAAGAAAAGAATGTAATTGGAATTTTAGAAGCTGTCAAGTCTGAAGAGGTTGAAATTCAATATTGA

Coding sequence (CDS)

ATGACGTCAAAGGATTTGCAAAACCGCGGCACCCAGTACTTCATTTTACTTTATCCTGGTGACGATTGCCAAGCGAACAATTCTGGAAAATTAAAACCTCCTCGAGAATTTAGAATCTTTTGGGATGACTTATCTGGTTGTAGAAGCTTGAGTAATTGCAGTCGTACAAATCCAGTGGTCAGAATATGGCAACCTATGCTTAAAATCCACCCCATCACCTTCACTTCTGGCCTCTGGGGTGCGTATAAATTGATGGTGTTCCCAAGAGCTTTTGAAGTGGTAAAGAAAGAAAAGAATGTAATTGGAATTTTAGAAGCTGTCAAGTCTGAAGAGGTTGAAATTCAATATTGA

Protein sequence

MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVVRIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY*

Homology

[Close]

BLAST of CsGy5G024750 vs. NCBI nr
Match: KGN52084.1 (hypothetical protein Csa_008570 [Cucumis sativus])

HSP 1 Score: 247 bits (630), Expect = 1.18e-82
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV 60
           MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV
Sbjct: 1   MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV 60

Query: 61  RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY 116
           RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY
Sbjct: 61  RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY 116

[Close]

BLAST of CsGy5G024750 vs. ExPASy TrEMBL
Match: A0A0A0KT74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609700 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 5.73e-83
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV 60
           MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV
Sbjct: 1   MTSKDLQNRGTQYFILLYPGDDCQANNSGKLKPPREFRIFWDDLSGCRSLSNCSRTNPVV 60

Query: 61  RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY 116
           RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY
Sbjct: 61  RIWQPMLKIHPITFTSGLWGAYKLMVFPRAFEVVKKEKNVIGILEAVKSEEVEIQY 116

The following BLAST results are available for this feature:

BLAST of CsGy5G024750 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G024750 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52084.1	1.18e-82	100.00	hypothetical protein Csa_008570 [Cucumis sativus]	[more]

BLAST of CsGy5G024750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT74	5.73e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609700 PE=4 SV=1	[more]

BLAST of CsGy5G024750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G024750.2	CsGy5G024750.2	mRNA