CsGy5G024320 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G024320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Nudix hydrolase domain-containing protein
Location	Gy14Chr5: 28946790 .. 28947973 (+)
RNA-Seq Expression	CsGy5G024320
Synteny	CsGy5G024320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATGGAAGGAAAAACAAAAGAGCAATTTTCCTTTAAGCAACTTCGTGGGCATGCAATGCCTCCATTGTGACCCCTATAAATAACAACACCATCATCCCCAAACTCCATACCATACCCCTCTTCTCTTCTCTTTTACGTTCTAAGAAGATTCTTCTGCCATTCTCTAACATCTTCAAACATGGTGTCTGCGGCCCAACAGAATAACTCTCCAAAATTAGTCAAAGCAAATGAAGACGATGATCATCATATGGCCTCCCCGTCTCCACAAGTTGCCGTTGCTATCTGTTTGTTGAAAGATAAAAGGATTCTCATGGGACGTCGACTTGTGTCCATTGGAAACTCCAAATATTCTCTCCCAAGCGGCCATCTCGAATTTGGTAACTGCAGTACTAATACGTAAAACTTAAAGATGGGTTTAAGTGTGTTTATGATTAACGTAACTTTAAATTATTTTAAATTTGAACAGGGGAGAATTTTGAAGAATGTGCCATAAGAGAAATCAAAGAAGAGACAGGTTTGGACATCGAGAAGATTGAGTTTTTAAAAGTGACGAATAATTTGTTCATGGACCAACCAAAACCGGCTCATTACGTGGTGGTGTTCGTAAGAGCAGTATTGACAGATCCCACACAAACACCGATCAACCTTGAGCCTGAAAAATGTGATGGTTGGGATTGGTATGAATGGGACAAACTTCCTCACCCTTTGTTTGGACCTATCAAGAAAATGGTCACGGATGGCTTTAATCCCTTTCCCACAATAAGCTAACTAGCTGCCCCATGGTTAGGTTGGATCTGCATGGGTTCGGGTCAGGTGTTGAAATCATAAATATATATCTTCATATATACTATATATCAGGAATTATATCAGTGGGTAATTAAGCTTGTTGTATATTAAATTTTCTTGCTCTTGAAATCACTAATGTTGGAGTTGAAATGGGTGGGAGAAGGAAAAGGTGTTTTGTTCCTACCTTTACTTTCATTGTAAAATTGGAATTTATGTAATAATAACAAAGTGTTGTAAGTTTGAAGAAATTGTTTCTCTTGTGTGATTTTGGTTACTATAAAAGTTGGGCAAATTGTTTTTTATCAAATGAGATTTTTCTTTTTGGCTGATACCGAGAAAGAAAAAAATTTACTTCATCATTTTTAAAATAGATAATATCGTAAAGATATCTTAGC

mRNA sequence

GAAAATGGAAGGAAAAACAAAAGAGCAATTTTCCTTTAAGCAACTTCGTGGGCATGCAATGCCTCCATTGTGACCCCTATAAATAACAACACCATCATCCCCAAACTCCATACCATACCCCTCTTCTCTTCTCTTTTACGTTCTAAGAAGATTCTTCTGCCATTCTCTAACATCTTCAAACATGGTGTCTGCGGCCCAACAGAATAACTCTCCAAAATTAGTCAAAGCAAATGAAGACGATGATCATCATATGGCCTCCCCGTCTCCACAAGTTGCCGTTGCTATCTGTTTGTTGAAAGATAAAAGGATTCTCATGGGACGTCGACTTGTGTCCATTGGAAACTCCAAATATTCTCTCCCAAGCGGCCATCTCGAATTTGGGGAGAATTTTGAAGAATGTGCCATAAGAGAAATCAAAGAAGAGACAGGTTTGGACATCGAGAAGATTGAGTTTTTAAAAGTGACGAATAATTTGTTCATGGACCAACCAAAACCGGCTCATTACGTGGTGGTGTTCGTAAGAGCAGTATTGACAGATCCCACACAAACACCGATCAACCTTGAGCCTGAAAAATGTGATGGTTGGGATTGGTATGAATGGGACAAACTTCCTCACCCTTTGTTTGGACCTATCAAGAAAATGGTCACGGATGGCTTTAATCCCTTTCCCACAATAAGCTAACTAGCTGCCCCATGGTTAGGTTGGATCTGCATGGGTTCGGGTCAGGTGTTGAAATCATAAATATATATCTTCATATATACTATATATCAGGAATTATATCAGTGGGTAATTAAGCTTGTTGTATATTAAATTTTCTTGCTCTTGAAATCACTAATGTTGGAGTTGAAATGGGTGGGAGAAGGAAAAGGTGTTTTGTTCCTACCTTTACTTTCATTGTAAAATTGGAATTTATGTAATAATAACAAAGTGTTGTAAGTTTGAAGAAATTGTTTCTCTTGTGTGATTTTGGTTACTATAAAAGTTGGGCAAATTGTTTTTTATCAAATGAGATTTTTCTTTTTGGCTGATACCGAGAAAGAAAAAAATTTACTTCATCATTTTTAAAATAGATAATATCGTAAAGATATCTTAGC

Coding sequence (CDS)

ATGGTGTCTGCGGCCCAACAGAATAACTCTCCAAAATTAGTCAAAGCAAATGAAGACGATGATCATCATATGGCCTCCCCGTCTCCACAAGTTGCCGTTGCTATCTGTTTGTTGAAAGATAAAAGGATTCTCATGGGACGTCGACTTGTGTCCATTGGAAACTCCAAATATTCTCTCCCAAGCGGCCATCTCGAATTTGGGGAGAATTTTGAAGAATGTGCCATAAGAGAAATCAAAGAAGAGACAGGTTTGGACATCGAGAAGATTGAGTTTTTAAAAGTGACGAATAATTTGTTCATGGACCAACCAAAACCGGCTCATTACGTGGTGGTGTTCGTAAGAGCAGTATTGACAGATCCCACACAAACACCGATCAACCTTGAGCCTGAAAAATGTGATGGTTGGGATTGGTATGAATGGGACAAACTTCCTCACCCTTTGTTTGGACCTATCAAGAAAATGGTCACGGATGGCTTTAATCCCTTTCCCACAATAAGCTAA

Protein sequence

MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS*

Homology

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BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot
Match: M4I1C6 (Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-52
Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 28  SPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDIE 87
           S +VAV +CLL+ + +L+GRR  S+G+S +SLPSGHLEFGE+FEECA RE+KEET LDI 
Sbjct: 14  SIKVAVVVCLLRGQNVLLGRRRSSLGDSTFSLPSGHLEFGESFEECAARELKEETDLDIG 73

Query: 88  KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPHPL 147
           KIE L VTNNLF+D+ KP+ YV VF+RAVL DP Q P N+EPE CDGW WYEWD LP PL
Sbjct: 74  KIELLTVTNNLFLDEAKPSQYVAVFMRAVLADPRQEPQNIEPEFCDGWGWYEWDNLPKPL 133

Query: 148 FGPIKKMVTDGFNPFPT 165
           F P+  +V DGFNPFPT
Sbjct: 134 FWPLDNVVQDGFNPFPT 150

[Close]

BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot
Match: Q9CA40 (Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-48
Identity = 83/134 (61.94%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 29  PQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDIEK 88
           P+VAV + +L    IL+GRR  SIGNS ++LP GHLEFGE+FEECA RE+ EETGL IEK
Sbjct: 8   PRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETGLKIEK 67

Query: 89  IEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPHPLF 148
           ++ L VTNN+F + P P+HYV V +RAVL DP+Q P N+EPEKC+GWDWY+W+ LP PLF
Sbjct: 68  MKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLPKPLF 127

Query: 149 GPIKKMVTDGFNPF 163
            P++K+   GFNPF
Sbjct: 128 WPLEKLFGSGFNPF 141

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BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot
Match: Q9NV35 (Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-20
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 27  PSPQVAVAICLLKDKR-ILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLD 86
           P   V V +   K  R +L+G+R  S+G   + LP GHLEFGE +EECA RE  EE  L 
Sbjct: 12  PGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALH 71

Query: 87  IEKIEFLKVTNNLFMDQPKPAHYVVVFVRA-VLTDPTQTPINLEPEKCDGWDWYEWDKLP 146
           ++ + F  V N+    + +  HYV + ++  V       P N+EPEK + W+W  W++LP
Sbjct: 72  LKNVHFASVVNSFI--EKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELP 131

Query: 147 --HPLFGPIKKMVTDGFNPF 163
               LF  ++ +   G++PF
Sbjct: 132 PLDQLFWGLRCLKEQGYDPF 149

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BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot
Match: Q8BG93 (Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-19
Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 29  PQVAVAICLLK---DKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLD 88
           P V V + +L     + +L+G+R  S G   + LP GHLEFGE +EECA RE  EE GL 
Sbjct: 11  PGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGLH 70

Query: 89  IEKIEFLKVTNNLFMDQPKPAHYVVVFVRA-VLTDPTQTPINLEPEKCDGWDWYEWDKLP 148
           ++ + F  V N+    + +  HYV + ++  V       P N+EPEK + W+W  W++ P
Sbjct: 71  LKNVCFASVVNSFV--EKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFP 130

Query: 149 --HPLFGPIKKMVTDGFNPF 163
               LF  ++ +   G++PF
Sbjct: 131 PLDQLFWALRCLKEQGYDPF 148

[Close]

BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot
Match: C5BHE7 (NAD-capped RNA hydrolase NudC OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=nudC PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-07
Identity = 36/132 (27.27%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 29  PQVA--VAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDI 88
           PQ+A  + + + +D  IL+ R      N  Y++ +G +E GE  E+ A REI EE+ L +
Sbjct: 125 PQIAPCIIVAIRRDDHILLARH-NRHRNGIYTVLAGFVEVGETLEQAAAREIFEESRLQV 184

Query: 89  EKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPH- 148
           + + ++         QP P  + ++   A L D     +  +P++    DWY +D+LP  
Sbjct: 185 KNLRYV-------TSQPWPFPHSLMM--AFLADYAAGDLCHDPKELQEADWYRYDRLPQL 244

Query: 149 PLFGPIKKMVTD 158
           P  G + + + +
Sbjct: 245 PPVGTVARRLIE 246

[Close]

BLAST of CsGy5G024320 vs. NCBI nr
Match: XP_004135122.1 (geranyl diphosphate phosphohydrolase [Cucumis sativus] >KGN52033.1 hypothetical protein Csa_008820 [Cucumis sativus])

HSP 1 Score: 350 bits (899), Expect = 4.72e-122
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS 166
           TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS
Sbjct: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS 166

[Close]

BLAST of CsGy5G024320 vs. NCBI nr
Match: KAA0034516.1 (nudix hydrolase 1-like [Cucumis melo var. makuwa] >TYK09070.1 nudix hydrolase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 8.86e-106
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAA+Q NSP L KANEDD H  A PSPQVAVAICLL+DKRILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAEQINSPTLAKANEDD-HVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDI KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163
           TQTP+NLEPEKCDGWDWYEWD LP PLFGPIKKMV DGFNPFP
Sbjct: 121 TQTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFP 162

[Close]

BLAST of CsGy5G024320 vs. NCBI nr
Match: XP_008446534.1 (PREDICTED: nudix hydrolase 1-like [Cucumis melo])

HSP 1 Score: 309 bits (792), Expect = 4.53e-105
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAA+Q NSP L KANEDD H  A PSPQVAVAICLL+DKRILMGRRLVSIGNSKYSLP
Sbjct: 48  MVSAAEQINSPTLAKANEDD-HVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLP 107

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDI KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 108 SGHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 167

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163
           TQTP+NLEPEKCDGWDWYEWD LP PLFGPIKKMV DGFNPFP
Sbjct: 168 TQTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFP 209

[Close]

BLAST of CsGy5G024320 vs. NCBI nr
Match: XP_038892917.1 (geranyl diphosphate phosphohydrolase [Benincasa hispida])

HSP 1 Score: 292 bits (748), Expect = 4.38e-99
Identity = 139/163 (85.28%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAA+QNN  KLV+A ED     A+P+PQVAVAICLL+ KRILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAEQNNGSKLVEAKEDQA--AAAPTPQVAVAICLLRGKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECA RE+KEETGLDIEKIEFLKVTNNLF+DQP+ AHYVVVFVRAVL DP
Sbjct: 61  SGHLEFGENFEECAARELKEETGLDIEKIEFLKVTNNLFLDQPRQAHYVVVFVRAVLADP 120

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163
           TQTP+NLEPEKCDGWDWYEWD LP PLFGPIKKMV DGFNPFP
Sbjct: 121 TQTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFP 161

[Close]

BLAST of CsGy5G024320 vs. NCBI nr
Match: XP_022149108.1 (geranyl diphosphate phosphohydrolase [Momordica charantia])

HSP 1 Score: 264 bits (675), Expect = 6.48e-88
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 26  SPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLD 85
           +P+PQVAVAICLLK  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLD
Sbjct: 28  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLD 87

Query: 86  IEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPH 145
           IEKIEFLKVTNNLF++QP+PAHYVVVFVRAVL DP QTP NLEPEKC+GWDWYEW  LPH
Sbjct: 88  IEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPH 147

Query: 146 PLFGPIKKMVTDGFNPFP 163
           PLFGPIK MV DGFNPFP
Sbjct: 148 PLFGPIKNMVVDGFNPFP 165

[Close]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL
Match: A0A0A0KR28 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608210 PE=3 SV=1)

HSP 1 Score: 350 bits (899), Expect = 2.29e-122
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS 166
           TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS
Sbjct: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFPTIS 166

[Close]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL
Match: A0A5D3CCL5 (Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00600 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 4.29e-106
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAA+Q NSP L KANEDD H  A PSPQVAVAICLL+DKRILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAEQINSPTLAKANEDD-HVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDI KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163
           TQTP+NLEPEKCDGWDWYEWD LP PLFGPIKKMV DGFNPFP
Sbjct: 121 TQTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFP 162

[Close]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL
Match: A0A1S3BFY2 (nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103489236 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 2.19e-105
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60
           MVSAA+Q NSP L KANEDD H  A PSPQVAVAICLL+DKRILMGRRLVSIGNSKYSLP
Sbjct: 48  MVSAAEQINSPTLAKANEDD-HVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLP 107

Query: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120
           SGHLEFGENFEECAIREIKEETGLDI KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP
Sbjct: 108 SGHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 167

Query: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163
           TQTP+NLEPEKCDGWDWYEWD LP PLFGPIKKMV DGFNPFP
Sbjct: 168 TQTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFP 209

[Close]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL
Match: A0A6J1D5X4 (geranyl diphosphate phosphohydrolase OS=Momordica charantia OX=3673 GN=LOC111017600 PE=3 SV=1)

HSP 1 Score: 264 bits (675), Expect = 3.14e-88
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 26  SPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLD 85
           +P+PQVAVAICLLK  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLD
Sbjct: 28  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLD 87

Query: 86  IEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPH 145
           IEKIEFLKVTNNLF++QP+PAHYVVVFVRAVL DP QTP NLEPEKC+GWDWYEW  LPH
Sbjct: 88  IEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPH 147

Query: 146 PLFGPIKKMVTDGFNPFP 163
           PLFGPIK MV DGFNPFP
Sbjct: 148 PLFGPIKNMVVDGFNPFP 165

[Close]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL
Match: A0A6J1G1K2 (geranyl diphosphate phosphohydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC111449830 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.43e-87
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 27  PSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDI 86
           PSPQVAVAICLL+DK +LMGRRLVSIGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI
Sbjct: 22  PSPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDI 81

Query: 87  EKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPHP 146
           EK+EFLKVTNNLFMDQP PAHYVVVFVRAVL DP QTP+NLEP+KC GWDWYEWD LP P
Sbjct: 82  EKVEFLKVTNNLFMDQPTPAHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQP 141

Query: 147 LFGPIKKMVTDGFNPF 162
           LFGPIK MV +GFNPF
Sbjct: 142 LFGPIKAMVMEGFNPF 157

[Close]

BLAST of CsGy5G024320 vs. TAIR 10
Match: AT1G68760.1 (nudix hydrolase 1 )

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49
Identity = 83/134 (61.94%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 29  PQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETGLDIEK 88
           P+VAV + +L    IL+GRR  SIGNS ++LP GHLEFGE+FEECA RE+ EETGL IEK
Sbjct: 8   PRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETGLKIEK 67

Query: 89  IEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKCDGWDWYEWDKLPHPLF 148
           ++ L VTNN+F + P P+HYV V +RAVL DP+Q P N+EPEKC+GWDWY+W+ LP PLF
Sbjct: 68  MKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLPKPLF 127

Query: 149 GPIKKMVTDGFNPF 163
            P++K+   GFNPF
Sbjct: 128 WPLEKLFGSGFNPF 141

[Close]

BLAST of CsGy5G024320 vs. TAIR 10
Match: AT5G47650.1 (nudix hydrolase homolog 2 )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 32/130 (24.62%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 18  EDDDHHMASPSPQVAV-AICLLKDKRILMGRRLVS--IGNSKYSLPSGHLEFGENFEECA 77
           ++DD   A+ S +V + A  +  +K +L+ +       G   +  P+G +  GE+  + +
Sbjct: 100 KEDDTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGS 159

Query: 78  IREIKEETGLDIE--KIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPTQTPINLEPEKC 137
           +RE+KEETG+D E  +I   + T+  F  +       + FV   +  P    IN +  + 
Sbjct: 160 VREVKEETGVDTEFDQILAFRQTHKAFFGKSD-----LFFV--CMLKPLSLEINAQESEI 219

Query: 138 DGWDWYEWDK 143
           +   W  W++
Sbjct: 220 EAAQWMPWEE 222

[Close]

BLAST of CsGy5G024320 vs. TAIR 10
Match: AT2G42070.1 (nudix hydrolase homolog 23 )

HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04
Identity = 20/66 (30.30%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 24  MASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLPSGHLEFGENFEECAIREIKEETG 83
           +A  +P++ V   +  + ++L+ +R +   +  ++LP+G+LE GE+  + A+RE  EE G
Sbjct: 116 IAYQNPKMVVGCLIEHEGKVLLCKRNIQPSHGLWTLPAGYLEVGESAAQGAMRETWEEAG 175

Query: 84  LDIEKI 90
             +E I
Sbjct: 176 ATVEVI 181

The following BLAST results are available for this feature:

BLAST of CsGy5G024320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M4I1C6	1.4e-52	67.15	Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1...	[more]
Q9CA40	2.1e-48	61.94	Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1	[more]
Q9NV35	3.2e-20	36.43	Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 P...	[more]
Q8BG93	2.1e-19	35.71	Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 ...	[more]
C5BHE7	6.9e-07	27.27	NAD-capped RNA hydrolase NudC OS=Edwardsiella ictaluri (strain 93-146) OX=634503...	[more]

BLAST of CsGy5G024320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135122.1	4.72e-122	100.00	geranyl diphosphate phosphohydrolase [Cucumis sativus] >KGN52033.1 hypothetical ...	[more]
KAA0034516.1	8.86e-106	91.41	nudix hydrolase 1-like [Cucumis melo var. makuwa] >TYK09070.1 nudix hydrolase 1-...	[more]
XP_008446534.1	4.53e-105	91.41	PREDICTED: nudix hydrolase 1-like [Cucumis melo]	[more]
XP_038892917.1	4.38e-99	85.28	geranyl diphosphate phosphohydrolase [Benincasa hispida]	[more]
XP_022149108.1	6.48e-88	86.23	geranyl diphosphate phosphohydrolase [Momordica charantia]	[more]

BLAST of CsGy5G024320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR28	2.29e-122	100.00	Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G60...	[more]
A0A5D3CCL5	4.29e-106	91.41	Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3BFY2	2.19e-105	91.41	nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103489236 PE=3 SV=1	[more]
A0A6J1D5X4	3.14e-88	86.23	geranyl diphosphate phosphohydrolase OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1G1K2	1.43e-87	87.50	geranyl diphosphate phosphohydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsGy5G024320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68760.1	1.5e-49	61.94	nudix hydrolase 1	[more]
AT5G47650.1	2.5e-04	24.62	nudix hydrolase homolog 2	[more]
AT2G42070.1	3.3e-04	30.30	nudix hydrolase homolog 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 71..86 score: 49.07 coord: 57..71 score: 38.89
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 22..165 e-value: 1.0E-46 score: 160.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR16099:SF6	NUDIX HYDROLASE DOMAIN-LIKE PROTEIN-RELATED	coord: 26..164
None	No IPR available	PANTHER	PTHR16099	8-OXO-DGTP DIPHOSPHATES NUDT15	coord: 26..164
None	No IPR available	CDD	cd04678	Nudix_Hydrolase_19	coord: 29..153 e-value: 1.95915E-55 score: 168.979
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 30..152 e-value: 8.4E-20 score: 71.1
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 28..161 score: 16.050903
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 62..83
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 22..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G024320.1	CsGy5G024320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006203	dGTP catabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0035539	8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0016787	hydrolase activity