CsGy5G023810 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATGTGAGTGAAGGAAGAGGGTGGTGGTGACACCCGCTGGTGAGCGTAGGACCAAAGGCGGCAGCAGCAGCAGCAGCAAGCACCAAACCTACCCAGTCTTAACCATCTGGTTTGGTTAAGTGAACGTGTGGTTAGGTTGTGATAACCCACGGTGGGTTTAAGACCGTTTGAGGGAATTTTACACAAACGGTCAAATACAACACATAAAGCTTTCTATTCAGCTCATTTTCCCACACCACATACAAACTTTATATATCTTTCATATTTAATTCACTTCAAATGAATTGCGTTAAATAAGTAAAATAAAAAAAAGCCTAAAACTTAGCCTACTCGTGCTCGTATATAATAATGTCCCTTCCTTTCTAACGATCTTTAATTTCTGTCAACAAAAATACTCCGAACTTCTTTCTTCACCATTCTCTCTTGTGTACCTCTCACTTTCTTTCACTCCAGTGAAATCTGAGCTTTCTTCTTTGGGGTTTTCAAGGCTTTGAGCTTGAGTGCTCATTCCATTCATGGCTGTTTTTGTGTTCTTTGTGTTTTTTCTTGCGCTGACTGGTCGATCTTGTAAGTTTCAGTTTCTCCCGGGCTTTTTCTTGAGATTTTCCTTTATGGGGTTTTTGTTAATTTTGGGTTTCTCCATTTTCAGATGCGAACTATTGTTTGTGTAGAGATGGGGTTGGCCAATCAGCCCTTCAAAAGGCACTGGACTACGCCTGTGGAGCTGGAGCTGACTGTTCTTCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTTAAAGATCACTGCAATTACGCTGTCAACAGTTATTTCCAGCGAAAAGGGCAAGTCCAAGGAAGCTGTGACTTCAACGGTGCCGCCACGCCCAGCGTTACCCTCACTGCCTGTAAGATGTTTTCCTCTGTCTTCACTATTGTTTCTTATCCTCTATTTCACTGGATTTATCTTTCTTCATTGTGGGTTTTTTTTTTTTTTTTTTGCAGCTGCGCCTTCTGGTTGCGTCTATCCTTCTAGCCCCAGGTACTTTTCTAAGCTTTATGTCGCTGTAGCTTTCATATTTAATTAGATTTGGCTTAATTTCAATGTCGCCATTTTTGACTAACATCAGAGATTTGTCGGTGATGGGTTTGCGTTTCAATGCCGCCGTCTGGGTTTTGATTTTCCATTTTAGAATAATAAAATTAGGTGGTGGTGTAATTATTAGATCTAGTGAACTTCAAATGAACTTACTGGCTTGAACCACTCCCTTGTGGTACCGTGAGCTGTCCATGATGATTATATTTTTTTCCTTGTCAACTCTGGCTTGTTGTCGTCTTGTTCATCAGATCTCTCGATTCCCTTTCCACCTGTTATCGACACGTCGTTTGCTGTTGAACTTAAGTTTAAATCGTGCTTGTATTACAATTATTTATCTTTCTTGTCTCACTGGTGTTTATTTTTGCTTATATTTAAGCAATGCGGGAACATCGCCGACGAACGGTGGTGGAACTACGCCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACACCGACGGTGTTCGGTAACGGAATCAGCCCGAGTGGGAGCGGGAGCGGATTCAACGACGGTAGCGGCGGCGTGGGTTTCAATGAAAATAGGAACTTGCTTTTGGCAGTGGGGCTAAGTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGATGAAGATGGAGGATCGGATGGTGGATCTCGATGAATGGTTGAGATCTTGCCACATATGTAGGGGGTTACTTTTGACAATTGGATGTGGAAGGAAGAATCTAGAGGCAAACCCCACTAGGGTTTTTTTCTTGTTAATTTTTTGTTATTTCTAATGTTATTCCATTAAAGAAAAAGAAAAAAAAAATGGAGAGGATGTTTGATGATTCCTTTTTTGATGAATGGATGAATGGAGGAAGAAGAAGGAAGGAGTGGAATCTTTGATGAATGATTTTTTGGGGAGGGGATGGTGTTGTTGTATATTTGCTAGAGTTTATTTAATTTCTAATTTTGTGTTGTTGTAACATTCTCCTCCATTCACTTTCATTAATCTTTACTTTCCATCCATTTGGAATGATGCATTTAATAACTATTTGAATATTTATTATTACAAAATTACTAGTAGAAAAATGAGC CATGTGAGTGAAGGAAGAGGGTGGTGGTGACACCCGCTGGTGAGCGTAGGACCAAAGGCGGCAGCAGCAGCAGCAGCAAGCACCAAACCTACCCAGTCTTAACCATCTGGTTTGGTTAAGTGAACGTGTGGTTAGGTTGTGATAACCCACGGTGGGTTTAAGACCGTTTGAGGGAATTTTACACAAACGGTCAAATACAACACATAAAGCTTTCTATTCAGCTCATTTTCCCACACCACATACAAACTTTATATATCTTTCATATTTAATTCACTTCAAATGAATTGCGTTAAATAAGTAAAATAAAAAAAAGCCTAAAACTTAGCCTACTCGTGCTCGTATATAATAATGTCCCTTCCTTTCTAACGATCTTTAATTTCTGTCAACAAAAATACTCCGAACTTCTTTCTTCACCATTCTCTCTTGTGTACCTCTCACTTTCTTTCACTCCAGTGAAATCTGAGCTTTCTTCTTTGGGGTTTTCAAGGCTTTGAGCTTGAGTGCTCATTCCATTCATGGCTGTTTTTGTGTTCTTTGTGTTTTTTCTTGCGCTGACTGGTCGATCTTATGCGAACTATTGTTTGTGTAGAGATGGGGTTGGCCAATCAGCCCTTCAAAAGGCACTGGACTACGCCTGTGGAGCTGGAGCTGACTGTTCTTCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTTAAAGATCACTGCAATTACGCTGTCAACAGTTATTTCCAGCGAAAAGGGCAAGTCCAAGGAAGCTGTGACTTCAACGGTGCCGCCACGCCCAGCGTTACCCTCACTGCCTGTAAGATGTTTTCCTCTGTCTTCACTATTGTTTCTTATCCTCTATTTCACTGGATTTATCTTTCTTCATTGTGGGTTTTTTTTTTTTTTTTTTGCAGCTGCGCCTTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACGGTGGTGGAACTACGCCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACACCGACGGTGTTCGGTAACGGAATCAGCCCGAGTGGGAGCGGGAGCGGATTCAACGACGGTAGCGGCGGCGTGGGTTTCAATGAAAATAGGAACTTGCTTTTGGCAGTGGGGCTAAGTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGATGAAGATGGAGGATCGGATGGTGGATCTCGATGAATGGTTGAGATCTTGCCACATATGTAGGGGGTTACTTTTGACAATTGGATGTGGAAGGAAGAATCTAGAGGCAAACCCCACTAGGGTTTTTTTCTTGTTAATTTTTTGTTATTTCTAATGTTATTCCATTAAAGAAAAAGAAAAAAAAAATGGAGAGGATGTTTGATGATTCCTTTTTTGATGAATGGATGAATGGAGGAAGAAGAAGGAAGGAGTGGAATCTTTGATGAATGATTTTTTGGGGAGGGGATGGTGTTGTTGTATATTTGCTAGAGTTTATTTAATTTCTAATTTTGTGTTGTTGTAACATTCTCCTCCATTCACTTTCATTAATCTTTACTTTCCATCCATTTGGAATGATGCATTTAATAACTATTTGAATATTTATTATTACAAAATTACTAGTAGAAAAATGAGC ATGCGAACTATTGTTTGTGTAGAGATGGGGTTGGCCAATCAGCCCTTCAAAAGGCACTGGACTACGCCTGTGGAGCTGGAGCTGACTGTTCTTCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTTAAAGATCACTGCAATTACGCTGTCAACAGTTATTTCCAGCGAAAAGGGCAAGTCCAAGGAAGCTGTGACTTCAACGGTGCCGCCACGCCCAGCGTTACCCTCACTGCCTGTAAGATGTTTTCCTCTGTCTTCACTATTGTTTCTTATCCTCTATTTCACTGGATTTATCTTTCTTCATTGTGGGTTTTTTTTTTTTTTTTTTGCAGCTGCGCCTTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACGGTGGTGGAACTACGCCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACACCGACGGTGTTCGGTAACGGAATCAGCCCGAGTGGGAGCGGGAGCGGATTCAACGACGGTAGCGGCGGCGTGGGTTTCAATGAAAATAGGAACTTGCTTTTGGCAGTGGGGCTAAGTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA MRTIVCVEMGLANQPFKRHWTTPVELELTVLQSSPVALVFSPTLLKITAITLSTVISSEKGKSKEAVTSTVPPRPALPSLPVRCFPLSSLLFLILYFTGFIFLHCGFFFFFFAAAPSGCVYPSSPSNAGTSPTNGGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGFNENRNLLLAVGLSLWLSVLFLWG* Homology
BLAST of CsGy5G023810 vs. NCBI nr
Match: XP_004135148.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]) HSP 1 Score: 179 bits (455), Expect = 1.68e-53 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsGy5G023810 vs. NCBI nr
Match: XP_038892199.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 171 bits (434), Expect = 2.54e-50 Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of CsGy5G023810 vs. NCBI nr
Match: XP_008446432.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo] >KAA0034470.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa] >TYK09023.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa]) HSP 1 Score: 163 bits (413), Expect = 4.57e-47 Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of CsGy5G023810 vs. NCBI nr
Match: KAE8648763.1 (hypothetical protein Csa_008532 [Cucumis sativus]) HSP 1 Score: 158 bits (400), Expect = 2.95e-46 Identity = 85/91 (93.41%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of CsGy5G023810 vs. NCBI nr
Match: XP_022945109.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita moschata]) HSP 1 Score: 135 bits (341), Expect = 2.12e-36 Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of CsGy5G023810 vs. ExPASy TrEMBL
Match: A0A0A0KQT6 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606660 PE=4 SV=1) HSP 1 Score: 179 bits (455), Expect = 8.15e-54 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsGy5G023810 vs. ExPASy TrEMBL
Match: A0A5A7SU26 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00090 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 2.21e-47 Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of CsGy5G023810 vs. ExPASy TrEMBL
Match: A0A1S3BF20 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103489181 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 2.21e-47 Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of CsGy5G023810 vs. ExPASy TrEMBL
Match: A0A6J1G024 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita moschata OX=3662 GN=LOC111449448 PE=4 SV=1) HSP 1 Score: 135 bits (341), Expect = 1.03e-36 Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of CsGy5G023810 vs. ExPASy TrEMBL
Match: A0A6J1GWB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458119 PE=4 SV=1) HSP 1 Score: 135 bits (340), Expect = 2.36e-36 Identity = 73/101 (72.28%), Postives = 83/101 (82.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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