CsGy5G023180 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTCTTACCACACACAGGTTGAATAATTTGAATTTTAAGTTATGGGTTCGGGGAATTTTCTTCAAGTCGTCGCCAATAACTTCGATGTTCTTGCTTTGTAATACCTTTAGTATATAGTTTCTTCCATTATGCTAATTTGATTTATGAAACGCATTACCAACTCTCTACTGATTTTCTTTTCTTTTGAATTTTGATTTGATATTTTTGTTTGTAGGCCTGTGGTTTCTCTGGTGTATCCTCTGTAAGTGAGAAATAATGTTAGATTAGATTGTTGAATATTTAAAGAGTAATTATTATGTGTTTTAATTATTGTCACGTTTATTTATTTGGGGTTTTTAGTTTCATTTTTGTGTTTGAAAATGATGTATTGTATATTGTATAGTTATGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAGCAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACCTTTGCCAAAATACTTGAAGTGTAAGTCATCATCTCATCTTCCTTTCTCTTCAACTATATGTAGGGGAGCATGTTAGTATTGAAAAATTGAACCGATTGTTTAAAGTCGACGTAGAAAAAGTGTCAATTTGGTCTATTTCTACTCTTTTATAATCAAATTTTATCTAAACATTTATTAAACTAACCATAATTGATTCGGTGTCGATTAAGTGGTTTTATAAACTTAATTTTAAAAGAAAGATAGGTAAACAGACTAAATTTAAATTCGCTTAACACTCCGTTCTTGGTTTTATAATTAGGATAGCATGTCTTATATAATTAAATTTACAAAAGTTGATTAGCTTAATCTTTCCCATTGTTTTATTATTTAACACAATGTCAACATATATATGAGGTTTTATATTTGAACTTCAAAATCTGATCGCTAATATTGAATTTACTAGTCCTTTTAAAACCTTAAAAGTGTTCAAGTATATGTTGATATAGTTATATTCGTTTTACAAATCAACTTAAACAATTGATTTGAATACTGATAAAATAAAATATCATAGTCTATTTAAATTATTACAACTACAAGATTATCTAACATGAAATAACTTATTGACAACGTGTAGACAAAATGTAGCTATGTCGACGATTTTTGTTGCATTGGCAGAAAAAACTATCAAGAAAGTAAAATTTGTTTGGTGTAGCGTATTTAATTTGATGTTTATGCAAATATATATTTTGCAGGGTTGCGGTTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACACTTCAATGGGGCATCGCATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACTTATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCAGAGAAGTACATGGAAGAGCATGGGACTGAGGCTTTCGAAAGGCTTATGTATAAGGTTTGTCTTCTAAATTAAATGAACAGCAATACTAATATTGAATGATCGATCATATTATATAGATATGTATAGTCCATATGATCTTGATATAATTTATTGTTTGTGAACCTTAGCAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTGCATGATTTTCGATGATGATTATGCCTATTGAAATCTCGAATCTATATTTATATATGTAATTTATTACTAAAATAATTGCATCTAATTTTGGTTATAGTGTATTAAGTGAGTCCATTCAACAAGACGTGTTAAAGTCTAGTCACTTTTTTGTATGGGAATATGTACTCTAACCATTGTTGGCTATGCATAAGATTGGAAGGACCAGTATTGGCC TTTTTTTCTTACCACACACAGGTTGAATAATTTGAATTTTAAGTTATGGGTTCGGGGAATTTTCTTCAAGTCGTCGCCAATAACTTCGATGTTCTTGCTTTGCCTGTGGTTTCTCTGGTGTATCCTCTTTATGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAGCAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACCTTTGCCAAAATACTTGAAGTGGTTGCGGTTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACACTTCAATGGGGCATCGCATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACTTATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCAGAGAAGTACATGGAAGAGCATGGGACTGAGGCTTTCGAAAGGCTTATGTATAAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTGCATGATTTTCGATGATGATTATGCCTATTGAAATCTCGAATCTATATTTATATATGTAATTTATTACTAAAATAATTGCATCTAATTTTGGTTATAGTGTATTAAGTGAGTCCATTCAACAAGACGTGTTAAAGTCTAGTCACTTTTTTGTATGGGAATATGTACTCTAACCATTGTTGGCTATGCATAAGATTGGAAGGACCAGTATTGGCC ATGGGTTCGGGGAATTTTCTTCAAGTCGTCGCCAATAACTTCGATGTTCTTGCTTTGCCTGTGGTTTCTCTGGTGTATCCTCTTTATGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAGCAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACCTTTGCCAAAATACTTGAAGTGGTTGCGGTTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACACTTCAATGGGGCATCGCATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACTTATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCAGAGAAGTACATGGAAGAGCATGGGACTGAGGCTTTCGAAAGGCTTATGTATAAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTGCATGATTTTCGATGATGATTATGCCTATTGA MGSGNFLQVVANNFDVLALPVVSLVYPLYASIKAIETKSIVDDQQWLTYWVLYSLMTLFELTFAKILEVVAVWPYVKLIIMSWLVLPHFNGASHVYKNFIRPHYMNPQTSTLWYIPRKTKLIFSTQDDVLTAAEKYMEEHGTEAFERLMYKAERERSRRNNNCMIFDDDYAY* Homology
BLAST of CsGy5G023180 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 2.2e-56 Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 4.0e-50 Identity = 92/155 (59.35%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 145.2 bits (365), Expect = 6.9e-34 Identity = 75/171 (43.86%), Postives = 113/171 (66.08%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 4.8e-27 Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of CsGy5G023180 vs. NCBI nr
Match: XP_011655675.1 (HVA22-like protein c isoform X2 [Cucumis sativus]) HSP 1 Score: 347 bits (890), Expect = 1.76e-120 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy5G023180 vs. NCBI nr
Match: XP_004135181.1 (HVA22-like protein c isoform X1 [Cucumis sativus] >KGN51905.1 hypothetical protein Csa_008962 [Cucumis sativus]) HSP 1 Score: 342 bits (878), Expect = 1.23e-118 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of CsGy5G023180 vs. NCBI nr
Match: XP_008446336.1 (PREDICTED: HVA22-like protein c isoform X2 [Cucumis melo]) HSP 1 Score: 337 bits (865), Expect = 1.14e-116 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsGy5G023180 vs. NCBI nr
Match: XP_038893173.1 (HVA22-like protein c isoform X2 [Benincasa hispida]) HSP 1 Score: 336 bits (861), Expect = 4.66e-116 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsGy5G023180 vs. NCBI nr
Match: XP_008446335.1 (PREDICTED: HVA22-like protein c isoform X1 [Cucumis melo]) HSP 1 Score: 333 bits (853), Expect = 8.01e-115 Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy TrEMBL
Match: A0A0A0KQK2 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G604990 PE=3 SV=1) HSP 1 Score: 342 bits (878), Expect = 5.97e-119 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy TrEMBL
Match: A0A1S3BFI0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 337 bits (865), Expect = 5.54e-117 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy TrEMBL
Match: A0A1S3BEU0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 333 bits (853), Expect = 3.88e-115 Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy TrEMBL
Match: A0A6J1HX10 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467434 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 4.00e-108 Identity = 157/173 (90.75%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of CsGy5G023180 vs. ExPASy TrEMBL
Match: A0A6J1FZG8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449339 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 4.00e-108 Identity = 157/173 (90.75%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of CsGy5G023180 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 219.9 bits (559), Expect = 1.6e-57 Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 0
BLAST of CsGy5G023180 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51 Identity = 92/155 (59.35%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of CsGy5G023180 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 145.2 bits (365), Expect = 4.9e-35 Identity = 75/171 (43.86%), Postives = 113/171 (66.08%), Query Frame = 0
BLAST of CsGy5G023180 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 122.5 bits (306), Expect = 3.4e-28 Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 0
BLAST of CsGy5G023180 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 97.8 bits (242), Expect = 8.9e-21 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|