CsGy5G022815 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G022815
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 28071254 .. 28071732 (-)
RNA-Seq Expression	CsGy5G022815
Synteny	CsGy5G022815

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAAACACTTAGAAATCTACCCAAACCCAACAACAAACAAATTCCAAGAGTTCGTGATAATATCCCAACACTTGAAACCAATTCGTTATAAGAATTAACAAAATAAACCTTACCCAATCTTATCGAAAAAGCTTCAATCCTTACCGGTTGGTATCTGAAATCGTCGGAACTTACAAAATTAGTCCTCAAACGCTATGGGTAACCCAATTTGAAGCCAACCAAAGCGTGGGTCAATGCCGGAACTCGTCGAAACCTTATCCCAAAATCAAAATCGCTGCTGCCAAACTCCACGTTGCCGAAAACGTGACACTGAACTTATTGTTTATGTTGGACCCTAAAGCGGAGAAGAAATGGTACCTCAAAACCCCAACCAAAGTCGTCGGAATCGTGCTCACAAAGCAAGTCAGATTAATGGGTGAATGTGTCGCTCGTGAATCAAGGAAACGCACAAGATCACGTCAAACTGATGGGTAG

mRNA sequence

ATGAATCAAACACTTAGAAATCTACCCAAACCCAACAACAAACAAATTCCAAGAGTTCGTGATAATATCCCAACACTTGAAACCAATTCCTTCAATCCTTACCGGTTGGTATCTGAAATCGTCGGAACTTACAAAATTAGTCCTCAAACGCTATGGGTAACCCAATTTGAAGCCAACCAAAGCGTGGGTCAATGCCGGAACTCGTCGAAACCTTATCCCAAAATCAAAATCGCTGCTGCCAAACTCCACGTTGCCGAAAACGTGACACTGAACTTATTGTTTATGTTGGACCCTAAAGCGGAGAAGAAATGGTACCTCAAAACCCCAACCAAAGTCGTCGGAATCGTGCTCACAAAGCAAGTCAGATTAATGGGTGAATGTGTCGCTCGTGAATCAAGGAAACGCACAAGATCACGTCAAACTGATGGGTAG

Coding sequence (CDS)

ATGAATCAAACACTTAGAAATCTACCCAAACCCAACAACAAACAAATTCCAAGAGTTCGTGATAATATCCCAACACTTGAAACCAATTCCTTCAATCCTTACCGGTTGGTATCTGAAATCGTCGGAACTTACAAAATTAGTCCTCAAACGCTATGGGTAACCCAATTTGAAGCCAACCAAAGCGTGGGTCAATGCCGGAACTCGTCGAAACCTTATCCCAAAATCAAAATCGCTGCTGCCAAACTCCACGTTGCCGAAAACGTGACACTGAACTTATTGTTTATGTTGGACCCTAAAGCGGAGAAGAAATGGTACCTCAAAACCCCAACCAAAGTCGTCGGAATCGTGCTCACAAAGCAAGTCAGATTAATGGGTGAATGTGTCGCTCGTGAATCAAGGAAACGCACAAGATCACGTCAAACTGATGGGTAG

Protein sequence

MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQSVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQVRLMGECVARESRKRTRSRQTDG*

Homology

[Close]

BLAST of CsGy5G022815 vs. NCBI nr
Match: KGN51873.1 (hypothetical protein Csa_009320 [Cucumis sativus])

HSP 1 Score: 285 bits (730), Expect = 4.96e-97
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ 60
           MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ
Sbjct: 1   MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ 60

Query: 61  SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ 120
           SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ
Sbjct: 61  SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ 120

Query: 121 VRLMGECVARESRKRTRSRQTDG 143
           VRLMGECVARESRKRTRSRQTDG
Sbjct: 121 VRLMGECVARESRKRTRSRQTDG 143

[Close]

BLAST of CsGy5G022815 vs. ExPASy TrEMBL
Match: A0A0A0KQH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604180 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.40e-97
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ 60
           MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ
Sbjct: 1   MNQTLRNLPKPNNKQIPRVRDNIPTLETNSFNPYRLVSEIVGTYKISPQTLWVTQFEANQ 60

Query: 61  SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ 120
           SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ
Sbjct: 61  SVGQCRNSSKPYPKIKIAAAKLHVAENVTLNLLFMLDPKAEKKWYLKTPTKVVGIVLTKQ 120

Query: 121 VRLMGECVARESRKRTRSRQTDG 143
           VRLMGECVARESRKRTRSRQTDG
Sbjct: 121 VRLMGECVARESRKRTRSRQTDG 143

The following BLAST results are available for this feature:

BLAST of CsGy5G022815 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G022815 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51873.1	4.96e-97	100.00	hypothetical protein Csa_009320 [Cucumis sativus]	[more]

BLAST of CsGy5G022815 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQH4	2.40e-97	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604180 PE=4 SV=1	[more]

BLAST of CsGy5G022815 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G022815.1	CsGy5G022815.1	mRNA