CsGy5G022320 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G022320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	serine/arginine-rich splicing factor RSZ21
Location	Gy14Chr5: 27723272 .. 27727763 (-)
RNA-Seq Expression	CsGy5G022320
Synteny	CsGy5G022320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGACTGTCACCTTCTGCAGACTTCCGAGCATCGGAGCTCTGCGACTACGGACGGACGGCGTTCTTTTCATTCCTTATCACCTGCTAATCTCTTCCTACTCTTTGTCGATTCGGCGAGATCTTTGTCTTGGTGAGCTTCAGCTTCGCGATCAACATGAGCATAACCCTAATTCTTTCTCTCTCTTTCTCTTGTTTTTTTTTTTTCAACGATGTATCCTTGAACCAGCCCTTCGATTTTGTTTTTTTCTTCTTCCATTTTTATAATCTCTTGGAAATACTTCGTATGTAGACTTCTTTTTGTGTGTATTTTTACCACGTGTAGACTTATTTGTTGTTGTAGCAGCTTTCGCATCCTGGGGTTGGGTGGGTTGTGTTGTGTTGTGTTGTATTATTCCCATCCCAATTTGTTGTTTAGATTAAACTCTAACTCCTCTTCGTCTTCGTTTTTTTCTTGTTTATTTATTGGGATGATTTGTTTTTTTAAACTAGCATCTTATTGTTTTTCAGGCGGTTCTTCGCTCATTTGTTACAATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACGGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGGTGATTTCTGTTTGAAAAGTTTTGTGTCGAGGCGTTCTTTACATGTATTTCTTAAATTAGCATCTTTTAGACGCAAGATATTTGAAAATGTGTAATTTTTAGTTCTTGGATTCTTTCAATCGGCAGTCTGTTGGGAATCCTGGGATTTATATATTCTGCGTTTGGTTTCTTTTTCGCTAAATATTATCTTCAAGGGTTTTTTCAGTATTAGCCTTGCATTTTTTGCGCCAGTTTACTATCTATTCATGGTGTTTTACCTGGCCAATCCGAGTCATTTCAGCACTCTATAGGGTAATAGAAACAGAGCAGAAAAGGCCTTATTTGGTCTCTTTGAATGTCATTACGTCTGTTTTAGTACTGAATACCATAAAAAGTCTGGTTAGTTTCTGCCCGTTAGCAATAGGAGCTCACTAATTGGACGCTGGTTTATACATATAAGATCAAAATTTCCCTTATTGTTAGTCATTTGTTTAAGAACTGGGTGCAGACACTCTGAGATATGTGCTCTGAAGTTTGCTGATGGCTATCCTTGCTATCTGTTGTGAAGATTTTGCTGCAAGGATATTTACACCTTACCTTAATTGCATATAAGTTATTTAATCGAAATAGTTTACAACATATATTGCTATAATTTGATATGATATTCCTGTTTCCTGGTTCCTTTGTATTATAGTGCATACTGAAGTATTTGTTTTTGAATAAAACATAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTAGATGGTCAGTTTTAAATAAGTGATTTTTGTATTATTTTTCTTTTTTCCTTGTAAATATCAAATTGTGCATTTCAATTTTCATTCCTTCTATCAAATGATGTTTTCCTCTGTATATATATGCTGTATGTGCTTGTGCCTGCTTTTCTCGATTACTAGTGAAAATATGATCAAGCAACTATCAGCAGGGGTTTTTCTTTGCTTTCATTACTGCAGTGAATTAGAAACCTATTAATATTATTGATCTAGTCTAATATCAACTTGTATCCCCAAAACTGGATTACATCAAGGAACTTTTGTAGATTCTTTAAATGTTACTTTATCCTTAGAAAGCACCTTATTGGAAAAGAGCGTAATGAATGGGCCTATCTCTCCAATATGCTCCAAAAATGTGATTTTTGGAATTACCATGATTTTAAGATGTAGAAACTCGATGTTATGGAATCCATTATTCAAAATCATATTTTTAATTTCATTTTTGATATTCATTCTTTCTCGAACCAGCACATAAGTTCTTTGGTGTGGAAGATTATAGTGCCTAAGAAGGCTAGTAGTTCAAGTCTTCATATGGACTTCATTCAATAATGGGCAAAATACCTGCAGTAAACTTTGAAAGTGCTCCCTGAATCCTAACCCTAACTCGTGCAAGTTTGATGAAATGAATCAATTTAATCTCTACTTCCATACTTTCAGTTTCATTTTCTCAATTGTCTTTTTTTGTTGGTATGCTGCTCACTGTTTTTGGCATCTCTTCGTGCTTCAACAAGTGTTGCAAATTGGAAGTCTAGTCTTTCAACTCCTTGGTTGTCAACTTTTCAAAGGTGCTATGGAACAAGTCAGATATTGCCATGTTATGAAGCATACTTTGAAAATGAGAGAAGTCAAATGAGTTATCAAGATGCTTTCTCCTCTACAGCGTGGAAGTCTTGTGCCTGGTTAAACTTTTCTTCTATCTTATCTTGTATTTGTGATTTTTCTTTGGGCTTCTTCTTTAGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTTGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGTGTGTTAAAGCTGTTTGTGTTTTTTATACACGCCAATTTTGTCTAACTGATGTCAAATCAACAGGTGGTTTAGTCTTGTATATAGTTTAGGTCTTGATGTTCTATCACTTCTTTCCCTTTTCTTGTGTAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCACCTTATGCTAATGGGTATGCCTTGCTTCCAAGTCATGAGAATTATTCACAAAAACTGTTTAGTTACTGAGAGGAGAGAGTAATTGGCTTAGATAGGTTGTTTTGTGCACATGGCCACATGGGTGATGGGCCTTGGCTAATCATTGGGAATTAGTGCTGTGGAACGAGGCTACTTGGAAGGCACTGACAATGGTGCTTTTGAAGTTTTCATTTCAGGCCATCACTGATCTCTCCCTTAACTAATAAGGCATTCTTTAGCGTTTTACCCTTCTGGCATGTGTTTTCATTATGAGGCCTATAACATTTCTACAAATTGAGCAGTGAATGATTCTCTACCACAAATGCCTGTCAAAATCATACTTGATTGAGCAATAAATTCCAAACTTCTGTTATTTTATCTGAGAGTTTTATGTTAATCATTATTGCAGAGATTGATGCTGGAATCAACGCTGGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGGAATTGTGGAGTGAACCGGAATCATGTAGTTAAGTTCGTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTAAGCCATGAAATGGGGTTCTGTCTGGCACCATTTTGTTGTTGGCTCTCTTCCGCCCCCTCGCTGAAACTCGGAGGTTTCTTTCTTGCTTTCAAAATTATATCTACTACCTAGAGTTCTTATATATAACCTTTCTGTCTATTTATCAATATTTCTTTTTCATTGGACGATCCTAAAGATTTATCTGTTGGCTGTTTTTTTTTTCTTTCATGTTCTTTTGAGGTGTGATTTTCGGCTAATATGGCATCTTAGTGCTTCACTACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTTCTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAAATCCTCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGTGATTTTCTGCTCATCATCTTCTCTCTCGCCTATCAACGTTTTACGAGCTCCTTCTATTACATTGCACGAAACTATCGTGAGAGATTCTACTCGTTTTATAGCTTCGGCATCTTGTGAGCTTCACAACTTGTTTATTGCACTCCCCAACTCTTCTGCCCCTGCTCCACCAACCTACCTTTCACTATAGTAATGCTTCCTTCAATCACACTTCTCCTTAGGTTAGACCACCGCCACTGTTGTCTTCTTCTCATTAGTTTGTGGTGGCTGCTTATTTATATATTCTCTGATTGTTTCTTGTTTGTTCTTTGCATAGAGAAATATACATTTGAGACCCCATTTTTAATTAGAGATTCCTCATTATTTGGTTTTATTGTGAGGTTATCTTCTTTAACGCACTATTCTCAAATAATATTGTAAGCTTTTCAGCGTCCGATTTTTTTTTTTTTTCACCTGGTTTTAAATACTTTGTGTTTTAACCTCATTTTGATAATCTAATTTAATATATATAACATATATATTCAGTTTGATGATAATTGGAAGTGTTCCCCATTTATCATTTATCTCT

mRNA sequence

CTTGACTGTCACCTTCTGCAGACTTCCGAGCATCGGAGCTCTGCGACTACGGACGGACGGCGTTCTTTTCATTCCTTATCACCTGCTAATCTCTTCCTACTCTTTGTCGATTCGGCGAGATCTTTGTCTTGGCGGTTCTTCGCTCATTTGTTACAATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACGGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTAGATGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTTGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCACCTTATGCTAATGGAGATTGATGCTGGAATCAACGCTGGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGGAATTGTGGAGTGAACCGGAATCATGTAGTTAAGTTCGTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTAAGCCATGAAATGGGGTTCTGTCTGGCACCATTTTGTTGTTGGCTCTCTTCCGCCCCCTCGCTGAAACTCGGAGGTTTCTTTCTTGCTTTCAAAATTATATCTACTACCTAGAGTTCTTATATATAACCTTTCTGTCTATTTATCAATATTTCTTTTTCATTGGACGATCCTAAAGATTTATCTGTTGGCTGTTTTTTTTTTCTTTCATGTTCTTTTGAGGTGTGATTTTCGGCTAATATGGCATCTTAGTGCTTCACTACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTTCTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAAATCCTCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGTGATTTTCTGCTCATCATCTTCTCTCTCGCCTATCAACGTTTTACGAGCTCCTTCTATTACATTGCACGAAACTATCGTGAGAGATTCTACTCGTTTTATAGCTTCGGCATCTTGTGAGCTTCACAACTTGTTTATTGCACTCCCCAACTCTTCTGCCCCTGCTCCACCAACCTACCTTTCACTATAGTAATGCTTCCTTCAATCACACTTCTCCTTAGGTTAGACCACCGCCACTGTTGTCTTCTTCTCATTAGTTTGTGGTGGCTGCTTATTTATATATTCTCTGATTGTTTCTTGTTTGTTCTTTGCATAGAGAAATATACATTTGAGACCCCATTTTTAATTAGAGATTCCTCATTATTTGGTTTTATTGTGAGGTTATCTTCTTTAACGCACTATTCTCAAATAATATTGTAAGCTTTTCAGCGTCCGATTTTTTTTTTTTTTCACCTGGTTTTAAATACTTTGTGTTTTAACCTCATTTTGATAATCTAATTTAATATATATAACATATATATTCAGTTTGATGATAATTGGAAGTGTTCCCCATTTATCATTTATCTCT

Coding sequence (CDS)

ATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACGGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTAGATGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTTGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCACCTTATGCTAATGGAGATTGA

Protein sequence

MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANGD*

Homology

[Close]

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot
Match: O81127 (Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RSZ21 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-63
Identity = 143/203 (70.44%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVELSH  KGG GGGGGRR           GG +D KCYECGE GHFARECR    
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR-----------GGIEDSKCYECGELGHFARECR---- 120

Query: 121 SRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYR 180
            RG G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR
Sbjct: 121 -RGRGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYR 180

Query: 181 HAR------------RASPYANG 190
            +R            R SPYANG
Sbjct: 181 GSRRDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-58
Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRG-RGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVE SHN +G  GGGGR G RGGGGGG GG GG DLKCYECGE GHFARECR+RGG
Sbjct: 61  KNGWRVEQSHN-RGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGG 120

Query: 121 SRGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSY 180
           +     G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSY
Sbjct: 121 T-----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSY 180

Query: 181 SRSPPYRHARRASPYANGD 191
           SRSPP   AR   PYANG+
Sbjct: 181 SRSPPPYRAREEVPYANGN 190

[Close]

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.9e-56
Identity = 132/195 (67.69%), Postives = 147/195 (75.38%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN    GGGGGR G  GGG GG G GG DLKCYECGE GHFARECRSRGGS
Sbjct: 61  KNGWRVEQSHNR---GGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSP 180
               GG RRS S     PR R+SP+Y   GRRS SPR +  P  R  +P  RGR+YSRSP
Sbjct: 121 ----GGRRRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRRSPSPRGRNYSRSP 180

Query: 181 PYRHARRASPYANGD 191
           P   AR   PYANG+
Sbjct: 181 PPYRARDEVPYANGN 186

[Close]

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-53
Identity = 125/193 (64.77%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M RVY+GNLDPRVT R+LEDEFR+FGVLRSVWVAR+PPG+AFI+FDDRRDA DAI+ +DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELS N+  G GG  R             G  + KCYECGE GHFARECR R GS
Sbjct: 61  KNGWRVELSRNASSGRGGRDRY------------GSSESKCYECGETGHFARECRLRIGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPY 180
            G+G G RRS S  R RSP Y R   YGRRS SP G RSPRRRS++ P R RSYSRSP Y
Sbjct: 121 GGLGSGRRRSRSRSRSRSPRYRRSPSYGRRSYSPAG-RSPRRRSVS-PARARSYSRSPQY 179

Query: 181 RHARRASP-YANG 190
              R  SP Y NG
Sbjct: 181 NRGRDESPAYDNG 179

[Close]

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-51
Identity = 122/192 (63.54%), Postives = 139/192 (72.40%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M R+Y+GNLDPRVT  +LEDEFR+FGVLRSVWVAR+PPG+AFI+FDD+RDA DA++ LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELS NS   GG    R R          GG ++KCYECGE GHFARECR R G 
Sbjct: 61  KNGWRVELSRNSSSRGG----RDR---------HGGSEMKCYECGETGHFARECRLRIGP 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPY 180
            G+G G RRS S  R RSP Y +   YGRRS SPR  RSPRRRS++ P RGRSYSRSP  
Sbjct: 121 GGLGSGKRRSRSRSRSRSPQYRKSPTYGRRSYSPR-DRSPRRRSVS-PVRGRSYSRSP-- 174

Query: 181 RHARRASPYANG 190
              R  SPYA+G
Sbjct: 181 -RGRGGSPYADG 174

[Close]

BLAST of CsGy5G022320 vs. NCBI nr
Match: XP_011655636.1 (serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypothetical protein Csa_008378 [Cucumis sativus])

HSP 1 Score: 358 bits (918), Expect = 3.47e-124
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGG  GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGG--GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA
Sbjct: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180

Query: 181 RRASPYANGD 190
           RRASPYANGD
Sbjct: 181 RRASPYANGD 188

[Close]

BLAST of CsGy5G022320 vs. NCBI nr
Match: XP_008446226.1 (PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_008446227.1 PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo])

HSP 1 Score: 354 bits (909), Expect = 7.88e-123
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA
Sbjct: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180

Query: 181 RRASPYANGD 190
           RRASPYANGD
Sbjct: 181 RRASPYANGD 187

[Close]

BLAST of CsGy5G022320 vs. NCBI nr
Match: TYK15593.1 (serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 352 bits (903), Expect = 1.27e-121
Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA
Sbjct: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180

Query: 181 RRASPYANG 189
           RRASPYANG
Sbjct: 181 RRASPYANG 186

[Close]

BLAST of CsGy5G022320 vs. NCBI nr
Match: XP_023004543.1 (serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima])

HSP 1 Score: 345 bits (885), Expect = 3.72e-119
Identity = 184/191 (96.34%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRH 180
           RG GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RH
Sbjct: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRH 180

Query: 181 ARRASPYANGD 190
           ARRASPYANGD
Sbjct: 181 ARRASPYANGD 188

[Close]

BLAST of CsGy5G022320 vs. NCBI nr
Match: KAG7012825.1 (Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (884), Expect = 5.48e-119
Identity = 183/192 (95.31%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGG--RRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRG 120
           KNGWRVELSHNSKGGGGGGG  RRGRGGGGGGG   GGDDLKCYECGEPGHFARECRSRG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGGGRRGRGGGGGGG---GGDDLKCYECGEPGHFARECRSRG 120

Query: 121 GSRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYR 180
           GSRG+GGGLRRSPSPRRRRSPSYERYGRRSNSP GKRSPRRRSITPPKRGRSYSRSPP R
Sbjct: 121 GSRGIGGGLRRSPSPRRRRSPSYERYGRRSNSPHGKRSPRRRSITPPKRGRSYSRSPPLR 180

Query: 181 HARRASPYANGD 190
           HARRASPYANGD
Sbjct: 181 HARRASPYANGD 189

[Close]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL
Match: A0A1S3BEJ4 (serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC103489020 PE=4 SV=1)

HSP 1 Score: 354 bits (909), Expect = 3.82e-123
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA
Sbjct: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180

Query: 181 RRASPYANGD 190
           RRASPYANGD
Sbjct: 181 RRASPYANGD 187

[Close]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL
Match: A0A5D3CUM7 (Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00890 PE=4 SV=1)

HSP 1 Score: 352 bits (903), Expect = 6.13e-122
Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA
Sbjct: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180

Query: 181 RRASPYANG 189
           RRASPYANG
Sbjct: 181 RRASPYANG 186

[Close]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL
Match: A0A6J1KZV2 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=LOC111497790 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 1.80e-119
Identity = 184/191 (96.34%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG   GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG---GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRH 180
           RG GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RH
Sbjct: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRH 180

Query: 181 ARRASPYANGD 190
           ARRASPYANGD
Sbjct: 181 ARRASPYANGD 188

[Close]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL
Match: A0A6J1GX57 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN=LOC111458322 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 1.38e-118
Identity = 182/191 (95.29%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGG     GGDDLKCYECGEPGHFARECRSRGGS
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGG-----GGDDLKCYECGEPGHFARECRSRGGS 120

Query: 121 RGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRH 180
           RG GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RH
Sbjct: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRH 180

Query: 181 ARRASPYANGD 190
           ARRASPYANGD
Sbjct: 181 ARRASPYANGD 186

[Close]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL
Match: A0A6J1G1N9 (serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449845 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 5.82e-118
Identity = 181/191 (94.76%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRR-GRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVELSHNSKGGGGGGG R GRGGGGGG    GGDDLKCYECGEPGHFARECRSRGG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGGRCGRGGGGGG----GGDDLKCYECGEPGHFARECRSRGG 120

Query: 121 SRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRH 180
           SRG+GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPP RH
Sbjct: 121 SRGIGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPLRH 180

Query: 181 ARRASPYANGD 190
           AR ASPYANGD
Sbjct: 181 ARHASPYANGD 187

[Close]

BLAST of CsGy5G022320 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-64
Identity = 143/203 (70.44%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVELSH  KGG GGGGGRR           GG +D KCYECGE GHFARECR    
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR-----------GGIEDSKCYECGELGHFARECR---- 120

Query: 121 SRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYR 180
            RG G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR
Sbjct: 121 -RGRGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYR 180

Query: 181 HAR------------RASPYANG 190
            +R            R SPYANG
Sbjct: 181 GSRRDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of CsGy5G022320 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-64
Identity = 143/203 (70.44%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVELSH  KGG GGGGGRR           GG +D KCYECGE GHFARECR    
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR-----------GGIEDSKCYECGELGHFARECR---- 120

Query: 121 SRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYR 180
            RG G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR
Sbjct: 121 -RGRGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYR 180

Query: 181 HAR------------RASPYANG 190
            +R            R SPYANG
Sbjct: 181 GSRRDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of CsGy5G022320 vs. TAIR 10
Match: AT1G23860.4 (RS-containing zinc finger protein 21 )

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVELSH  KGG GGGGGRR           GG +D KCYECGE GHFARECR    
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR-----------GGIEDSKCYECGELGHFARECR---- 120

Query: 121 SRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYR 180
            RG G   RRSPSPRRRRSP Y      S SPRG+RS PRRRS+TPP+RGRSYSRSPPYR
Sbjct: 121 -RGRGSVRRRSPSPRRRRSPDY-----GSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYR 180

Query: 181 HAR------------RASPYANG 190
            +R            R SPYANG
Sbjct: 181 GSRRDSPRRRDSPYGRRSPYANG 182

[Close]

BLAST of CsGy5G022320 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 225.3 bits (573), Expect = 4.1e-59
Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRG-RGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVE SHN +G  GGGGR G RGGGGGG GG GG DLKCYECGE GHFARECR+RGG
Sbjct: 61  KNGWRVEQSHN-RGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGG 120

Query: 121 SRGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSY 180
           +     G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSY
Sbjct: 121 T-----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSY 180

Query: 181 SRSPPYRHARRASPYANGD 191
           SRSPP   AR   PYANG+
Sbjct: 181 SRSPPPYRAREEVPYANGN 190

[Close]

BLAST of CsGy5G022320 vs. TAIR 10
Match: AT4G31580.2 (serine/arginine-rich 22 )

HSP 1 Score: 225.3 bits (573), Expect = 4.1e-59
Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRG-RGGGGGGGGGGGGDDLKCYECGEPGHFARECRSRGG 120
           KNGWRVE SHN +G  GGGGR G RGGGGGG GG GG DLKCYECGE GHFARECR+RGG
Sbjct: 61  KNGWRVEQSHN-RGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGG 120

Query: 121 SRGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSY 180
           +     G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSY
Sbjct: 121 T-----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSY 180

Query: 181 SRSPPYRHARRASPYANGD 191
           SRSPP   AR   PYANG+
Sbjct: 181 SRSPPPYRAREEVPYANGN 190

The following BLAST results are available for this feature:

BLAST of CsGy5G022320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81127	1.6e-63	70.44	Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O81126	5.8e-58	70.85	Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q9SJA6	1.9e-56	67.69	Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q69KL9	1.9e-53	64.77	Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3...	[more]
Q6K4N0	1.1e-51	63.54	Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CsGy5G022320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655636.1	3.47e-124	98.95	serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypot...	[more]
XP_008446226.1	7.88e-123	97.89	PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_0084462...	[more]
TYK15593.1	1.27e-121	97.88	serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_023004543.1	3.72e-119	96.34	serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima]	[more]
KAG7012825.1	5.48e-119	95.31	Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of CsGy5G022320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEJ4	3.82e-123	97.89	serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC1034890...	[more]
A0A5D3CUM7	6.13e-122	97.88	Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1KZV2	1.80e-119	96.34	serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GX57	1.38e-118	95.29	serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G1N9	5.82e-118	94.76	serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata...	[more]

BLAST of CsGy5G022320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23860.1	1.1e-64	70.44	RS-containing zinc finger protein 21	[more]
AT1G23860.2	1.1e-64	70.44	RS-containing zinc finger protein 21	[more]
AT1G23860.4	1.4e-62	68.97	RS-containing zinc finger protein 21	[more]
AT4G31580.1	4.1e-59	70.85	serine/arginine-rich 22	[more]
AT4G31580.2	4.1e-59	70.85	serine/arginine-rich 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..69 e-value: 7.6E-18 score: 75.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..61 e-value: 2.3E-16 score: 59.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..73 score: 16.107859
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 100..116 e-value: 1.9E-5 score: 34.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 100..115 e-value: 8.1E-8 score: 32.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 100..116 score: 11.037273
None	No IPR available	GENE3D	4.10.60.10		coord: 99..143 e-value: 9.6E-8 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..176
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..188
None	No IPR available	PANTHER	PTHR23147:SF164	SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1	coord: 2..188
None	No IPR available	CDD	cd12373	RRM_SRSF3_like	coord: 3..71 e-value: 1.13622E-34 score: 115.41
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..98 e-value: 1.1E-23 score: 85.8
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 91..117
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 2..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G022320.2	CsGy5G022320.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding