CsGy5G020960 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	REF/SRPP-like protein At1g67360
Location	Gy14Chr5: 26804028 .. 26806355 (-)
RNA-Seq Expression	CsGy5G020960
Synteny	CsGy5G020960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTATCACTTTCCTTCGCCCAAGAAAAATAAAAAGATTCTCCTCAATAACTATTTTATCACCGGACCCACCTTTTCTCCCTCTTTTCATCTCAGCCCTTGGATCCTTCCATTTCCTTTATATAAAGACTACAAACCCGTTATGATCTTCGATATCTTTTAGAGAGCCCAACAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAATTACTACAAAATCCCATTTCTCGAAGACTAAAATCACTGTAAGATTTAGTTGATTGTTGTTCAATCTTTGTTCTGTTCAATTTTTTTGTTCTTAATTCCTTATATTATTGTTCTTATTATTTATTTGTCTGTGCAAGGATTTACTGTTTGTGATCGATTGGGTGTTTTGACAGATGGAGAGTGAAAGCCAGAATTTGGAGTTGAAGCATCTAGGTTTTGTAAGGGTTGCTTTGATTCAAACGATTGTTTGTGTTACGAATCTGTACGATTATGCGAAGCAGAACTCTGGACCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGTGCTGTTAACACTGTTGTAACTCCGGCTTATGAGAAGCTTCGAATCGCTCCTGATGATGTTCTAGTTTTTCTTGACGGCAAGGTAATTTTTTGTTTTTCTTCTCTAATCCTTTGGACTTTCTTTAGATCTTAAGATGGCTTTCTTGGATCAATTTAGTATCTTATGATTTAATCGATTGTACGGACGATTGTCGGTTGGCTGGCTTGTGTTTGATTGGATAGAGATGCATTGCTTTCTGATTAGATTTATCTATAAACCGTATTCTCTTGAAATGAATGTAACTATAAATCAAGTGTCTCCATTTCTTTAACCGGCCAATTGAATTACAATTCGTATATGTTCTTACCTGTTAGAAACTTGAGTTTCAACGATCAATTCAGGAAAAAGATGCATCGAAATCTGTTTGAGAGTAAGGATAACTATGAGAGTTTGTTCGTAACAAGTTAGAGAAGATGAAACGCCTGAGTTTCTTCGTAATTTCTTCAAAGGACTATTAGAGTCTACAGTACAGATTTTCTAGCTGAAATGGACACTTTTAATTGTGGTGTGGAATGAATGTGTTGCAGGTCGACAAAGCTACACATGAATTTGATAAGCGTGCACCTCCTCTAGCAAAACAAGCCGCTCAAATTACTCAGCATTTCATCCAAAAAGCTGCTAGAACTGGACAACAACTTGTGAACGAGTTCCAAACCGGCGGACCACGCGCAGCGTTTCACTATGCAGCAAATGAGTACAAGCAGTTGGTTCTAGACCAAGGAGTGAAGATTTGGGCAGGACTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCGACTACAGCTCAGTGGTTGGAGAGTTACAACAGCAAGGTGAAAGAATTGAGGCAGAAGGGTTACCATGTCTTCGACTATTGTCCCGAGGTTCCCGTGAGTGAGATAGCTAAGGCATTTAAGCAGGACGAGTCAAAGAAGAAAGAAGAGACATCTCCTAATACTCCTGAACAAGCTCCATCCAAGCACGAAGCAGGTTCCGATTCTGATTCTGATTCGGACTCGGCTTCGGTTGCTGCAGGTCCCAATTAGAAACTGGGGATTAGTTTGTTGGATTAGCCAATCGTGTGGTTTGCAAGATTGTATGATTCGTGATGTAGGAGCACAACAATGTTGGAGCCTTAGAAGGCTGTAAATGAATGGGATTTGATGATGTTGTTATGGAAAACTCATGTGATGTGTGTATATCAAGTGAACAAGTGAAGTTTTAGAACGGCATGCTTGCTTTTCAGGTTCCATGGTTCTAAAGGCACATACCATTCATAGCATCTTTGAGTGATTCGATTTTGGCATCGAAAATCTGTATGGAAAATGCCATTTAAATATGAAAAGGTATGTTTTGGAAGGGAGGGAAATTCGTGTACTTTCCTTCAAACGAATAGCTTGAGCAAGTCTCTGCTAACAAGAGGCAAAATTAGCAAAATTAGCAAAATTAGTTGAGAGTGCTTACTGTTTCTCTCTGTTTCTAGAACAGGAGTGATATTAGTGAACGAGTACAATACAACGATGGATGAAGATATATATGCTTTGGGGTGATTACACAGTCCAACGAAATTCAATAGAGGGAAGTAGTTGGAGCCCAACTTTGAGGGAATCATTTTTTTTTTCTTTTTTTTGAAAAGGATTGAGGAAAGTATTTTAATAGCTTATAATTAAAGCATATGTTATATTATTATATGGGTATAGAATGGTTTAAATGTAATTTGACAATAAATCTCAACGGTAGTAATGCATGAGTGATGACATTTTATGTGTAT

mRNA sequence

ACTCTATCACTTTCCTTCGCCCAAGAAAAATAAAAAGATTCTCCTCAATAACTATTTTATCACCGGACCCACCTTTTCTCCCTCTTTTCATCTCAGCCCTTGGATCCTTCCATTTCCTTTATATAAAGACTACAAACCCGTTATGATCTTCGATATCTTTTAGAGAGCCCAACAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAATTACTACAAAATCCCATTTCTCGAAGACTAAAATCACTGATTTACTGTTTGTGATCGATTGGGTGTTTTGACAGATGGAGAGTGAAAGCCAGAATTTGGAGTTGAAGCATCTAGGTTTTGTAAGGGTTGCTTTGATTCAAACGATTGTTTGTGTTACGAATCTGTACGATTATGCGAAGCAGAACTCTGGACCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGTGCTGTTAACACTGTTGTAACTCCGGCTTATGAGAAGCTTCGAATCGCTCCTGATGATGTTCTAGTTTTTCTTGACGGCAAGGTCGACAAAGCTACACATGAATTTGATAAGCGTGCACCTCCTCTAGCAAAACAAGCCGCTCAAATTACTCAGCATTTCATCCAAAAAGCTGCTAGAACTGGACAACAACTTGTGAACGAGTTCCAAACCGGCGGACCACGCGCAGCGTTTCACTATGCAGCAAATGAGTACAAGCAGTTGGTTCTAGACCAAGGAGTGAAGATTTGGGCAGGACTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCGACTACAGCTCAGTGGTTGGAGAGTTACAACAGCAAGGTGAAAGAATTGAGGCAGAAGGGTTACCATGTCTTCGACTATTGTCCCGAGGTTCCCGTGAGTGAGATAGCTAAGGCATTTAAGCAGGACGAGTCAAAGAAGAAAGAAGAGACATCTCCTAATACTCCTGAACAAGCTCCATCCAAGCACGAAGCAGGTTCCGATTCTGATTCTGATTCGGACTCGGCTTCGGTTGCTGCAGGTCCCAATTAGAAACTGGGGATTAGTTTGTTGGATTAGCCAATCGTGTGGTTTGCAAGATTGTATGATTCGTGATGTAGGAGCACAACAATGTTGGAGCCTTAGAAGGCTGTAAATGAATGGGATTTGATGATGTTGTTATGGAAAACTCATGTGATGTGTGTATATCAAGTGAACAAGTGAAGTTTTAGAACGGCATGCTTGCTTTTCAGGTTCCATGGTTCTAAAGGCACATACCATTCATAGCATCTTTGAGTGATTCGATTTTGGCATCGAAAATCTGTATGGAAAATGCCATTTAAATATGAAAAGGTATGTTTTGGAAGGGAGGGAAATTCGTGTACTTTCCTTCAAACGAATAGCTTGAGCAAGTCTCTGCTAACAAGAGGCAAAATTAGCAAAATTAGCAAAATTAGTTGAGAGTGCTTACTGTTTCTCTCTGTTTCTAGAACAGGAGTGATATTAGTGAACGAGTACAATACAACGATGGATGAAGATATATATGCTTTGGGGTGATTACACAGTCCAACGAAATTCAATAGAGGGAAGTAGTTGGAGCCCAACTTTGAGGGAATCATTTTTTTTTTCTTTTTTTTGAAAAGGATTGAGGAAAGTATTTTAATAGCTTATAATTAAAGCATATGTTATATTATTATATGGGTATAGAATGGTTTAAATGTAATTTGACAATAAATCTCAACGGTAGTAATGCATGAGTGATGACATTTTATGTGTAT

Coding sequence (CDS)

ATGGAGAGTGAAAGCCAGAATTTGGAGTTGAAGCATCTAGGTTTTGTAAGGGTTGCTTTGATTCAAACGATTGTTTGTGTTACGAATCTGTACGATTATGCGAAGCAGAACTCTGGACCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGTGCTGTTAACACTGTTGTAACTCCGGCTTATGAGAAGCTTCGAATCGCTCCTGATGATGTTCTAGTTTTTCTTGACGGCAAGGTCGACAAAGCTACACATGAATTTGATAAGCGTGCACCTCCTCTAGCAAAACAAGCCGCTCAAATTACTCAGCATTTCATCCAAAAAGCTGCTAGAACTGGACAACAACTTGTGAACGAGTTCCAAACCGGCGGACCACGCGCAGCGTTTCACTATGCAGCAAATGAGTACAAGCAGTTGGTTCTAGACCAAGGAGTGAAGATTTGGGCAGGACTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCGACTACAGCTCAGTGGTTGGAGAGTTACAACAGCAAGGTGAAAGAATTGAGGCAGAAGGGTTACCATGTCTTCGACTATTGTCCCGAGGTTCCCGTGAGTGAGATAGCTAAGGCATTTAAGCAGGACGAGTCAAAGAAGAAAGAAGAGACATCTCCTAATACTCCTGAACAAGCTCCATCCAAGCACGAAGCAGGTTCCGATTCTGATTCTGATTCGGACTCGGCTTCGGTTGCTGCAGGTCCCAATTAG

Protein sequence

MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSASVAAGPN*

Homology

[Close]

BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot
Match: Q9FYF7 (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-51
Identity = 107/240 (44.58%), Postives = 149/240 (62.08%), Query Frame = 0


Query: 1   MESESQN---LELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVT 60
           ME+E +N   + LKHL FVR+A I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVVT
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNE 120
           P Y+K +  PD +LVFLD KV + +++FD+ APP+AK+        I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKV 180
            +TGGP+AAF+YAA EYK  V+   VK+WA LN+    H   D A+P  A +   YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSD 238
            ++   GY +  Y P VPV +I KA++++++++K+       +   +    G  S SDS+
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKGETTDAADGDKSSSDSE 240

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BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.3e-33
Identity = 80/223 (35.87%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 10  LKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEKLRIAPDD 69
           LK+L FV+VA I  IVC ++LY+YAK+NSGPL+  V++VE  V TV+ P YEK    P +
Sbjct: 20  LKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFE 79

Query: 70  VLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGGP------ 129
           +L+F+D KV+ + +E ++  P L K+A+       QKA      + +E Q  G       
Sbjct: 80  LLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKN 139

Query: 130 ---------RAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYN 189
                            ++Y+ +     V  W  LNRLP F + A + VPT A W E YN
Sbjct: 140 ITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYN 199

Query: 190 SKVKELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPN 218
             V    ++GY V  Y P +P   IAK F+   +    ET+ N
Sbjct: 200 QSVSYTAERGYTVALYLPLIPTERIAKVFQDGSALPTVETNGN 242

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BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-29
Identity = 83/231 (35.93%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 3   SESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEK 62
           ++ +   LK+L FV+ A ++ ++    +Y  AK  SGPL+  VESVE AV TVV P YEK
Sbjct: 15  TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEK 74

Query: 63  LRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGG 122
               P +VL ++D KVD +  E D+R PP+ KQ +       Q A    + L +E +  G
Sbjct: 75  YHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAG 134

Query: 123 -----------------PRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPT 182
                            P A   YA   Y+       V  W  LN+LP F + A +AVPT
Sbjct: 135 VVETASGMAKSVYSKYEPAAKELYA--NYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPT 194

Query: 183 TAQWLESYNSKVKELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSP 217
            A   E YN  V +  +KGY V  Y P VP   I+K F    +++K ET P
Sbjct: 195 AAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIF----AEEKAETEP 239

[Close]

BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot
Match: O82246 (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28
Identity = 66/206 (32.04%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 4   ESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEKL 63
           +   ++LKHL F++VA +    C + LY+ AK N+GPL+  VE++E  V TV+ P YEK 
Sbjct: 35  DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKF 94

Query: 64  RIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGGP 123
              P  +L+F+D KVD    + +   P L KQA+        +  RTG     +      
Sbjct: 95  HDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSV 154

Query: 124 RAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKELRQK 183
           R  +  AA  Y          +W  LN+LP F + A + +PT   W E YN  V+ +  +
Sbjct: 155 RDKYEPAAEYY-------AATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDR 214

Query: 184 GYHVFDYCPEVPVSEIAKAFKQDESK 210
            Y   +Y P +P+ +I+   +QD+ +
Sbjct: 215 DYFGAEYLPMIPIEKISDILEQDQCR 233

[Close]

BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-24
Identity = 68/210 (32.38%), Postives = 102/210 (48.57%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           ME+ ++   L++L FV+ A  Q +V     Y YAKQ +GPLR  V+ VE  V  VV P Y
Sbjct: 26  MEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVY 85

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           ++    P D+L FLD KV ++  E D+R PP+ K+A  + +     AA   Q  +    T
Sbjct: 86  DRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLAR---SAAAEVRQAGLVGTAT 145

Query: 121 GGPRAAFHYAA-------NEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESY 180
           G  ++A   A          Y+ +   +  + WA LNRLP         +P  A     Y
Sbjct: 146 GLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARY 205

Query: 181 NSKVKELRQKGYHVFDYCPEVPVSEIAKAF 204
           N+ V +  ++G  V  Y P VP   +++ F
Sbjct: 206 NTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of CsGy5G020960 vs. NCBI nr
Match: XP_004135320.1 (REF/SRPP-like protein At1g67360 [Cucumis sativus] >XP_004135321.1 REF/SRPP-like protein At1g67360 [Cucumis sativus] >KGN51674.1 hypothetical protein Csa_007931 [Cucumis sativus])

HSP 1 Score: 481 bits (1238), Expect = 4.42e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS
Sbjct: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240

Query: 241 VAAGPN 246
           VAAGPN
Sbjct: 241 VAAGPN 246

[Close]

BLAST of CsGy5G020960 vs. NCBI nr
Match: XP_008446040.1 (PREDICTED: REF/SRPP-like protein At1g67360 [Cucumis melo] >KAA0034195.1 REF/SRPP-like protein [Cucumis melo var. makuwa] >TYK15725.1 REF/SRPP-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1176), Expect = 1.21e-161
Identity = 234/246 (95.12%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVR+ALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTG++LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYAANEYKQLVLDQGVK+WAGLNRLPSFHKFADMAVPT AQWLESYNSKVKEL
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVS+IAKAFKQ E+K+KEETSP TPEQAPSK+EAGSDSDSDSDSAS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEETSPTTPEQAPSKNEAGSDSDSDSDSAS 240

Query: 241 VAAGPN 246
           V AGPN
Sbjct: 241 V-AGPN 245

[Close]

BLAST of CsGy5G020960 vs. NCBI nr
Match: XP_038893091.1 (REF/SRPP-like protein At1g67360 [Benincasa hispida])

HSP 1 Score: 438 bits (1127), Expect = 3.30e-154
Identity = 221/241 (91.70%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLD KVDKATHEFDKRAPPLAKQA QITQHFIQKAARTGQ+LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHFIQKAARTGQELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYA NEYKQLVLDQ VKIWAGLNRLPSFHKFADMA+PTTAQWLESYN KVKE+
Sbjct: 121 GGPRAAFHYAGNEYKQLVLDQAVKIWAGLNRLPSFHKFADMALPTTAQWLESYNCKVKEM 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVS+IAKAFKQDE K+KEET P T EQAP KHE GSDSDSDSDS +
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQDEGKEKEETPPTTSEQAPPKHEPGSDSDSDSDSVA 240

[Close]

BLAST of CsGy5G020960 vs. NCBI nr
Match: XP_022998565.1 (REF/SRPP-like protein At1g67360 [Cucurbita maxima])

HSP 1 Score: 399 bits (1024), Expect = 1.81e-138
Identity = 205/240 (85.42%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           ME+E QNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLD KVDKATHEFDKRAPPLAKQA QITQH IQKAARTGQ+LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPT AQWLE YN KVK +
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLEWYNCKVKGM 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVP+SEIA+AFKQ E+KKKE   P TPEQAP K++ GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKE-APPTTPEQAPPKNKPGSDSDSESESES 239

[Close]

BLAST of CsGy5G020960 vs. NCBI nr
Match: XP_022956720.1 (REF/SRPP-like protein At1g67360 [Cucurbita moschata])

HSP 1 Score: 398 bits (1022), Expect = 3.65e-138
Identity = 203/240 (84.58%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           ME+E QNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLD KVDKATHEFDKRAPPLAKQA QITQH IQKAARTGQ+ VNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPT AQWLE YN KVK++
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVP+SEIA+AFKQ ++KKKE   P TPEQAP K++ GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGKAKKKE-APPTTPEQAPPKNKPGSDSDSESESES 239

[Close]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL
Match: A0A0A0KS04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589910 PE=3 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 2.14e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS
Sbjct: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240

Query: 241 VAAGPN 246
           VAAGPN
Sbjct: 241 VAAGPN 246

[Close]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL
Match: A0A5D3CW84 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002240 PE=3 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 5.84e-162
Identity = 234/246 (95.12%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVR+ALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTG++LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYAANEYKQLVLDQGVK+WAGLNRLPSFHKFADMAVPT AQWLESYNSKVKEL
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVS+IAKAFKQ E+K+KEETSP TPEQAPSK+EAGSDSDSDSDSAS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEETSPTTPEQAPSKNEAGSDSDSDSDSAS 240

Query: 241 VAAGPN 246
           V AGPN
Sbjct: 241 V-AGPN 245

[Close]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL
Match: A0A1S3BEY9 (REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 5.84e-162
Identity = 234/246 (95.12%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           MESESQNLELKHLGFVR+ALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTG++LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
           GGPRAAFHYAANEYKQLVLDQGVK+WAGLNRLPSFHKFADMAVPT AQWLESYNSKVKEL
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVPVS+IAKAFKQ E+K+KEETSP TPEQAPSK+EAGSDSDSDSDSAS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEETSPTTPEQAPSKNEAGSDSDSDSDSAS 240

Query: 241 VAAGPN 246
           V AGPN
Sbjct: 241 V-AGPN 245

[Close]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL
Match: A0A6J1KCW0 (REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111493158 PE=3 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 8.77e-139
Identity = 205/240 (85.42%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           ME+E QNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLD KVDKATHEFDKRAPPLAKQA QITQH IQKAARTGQ+LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQELVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPT AQWLE YN KVK +
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLEWYNCKVKGM 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVP+SEIA+AFKQ E+KKKE   P TPEQAP K++ GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKE-APPTTPEQAPPKNKPGSDSDSESESES 239

[Close]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL
Match: A0A6J1GYJ5 (REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111458353 PE=3 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 1.77e-138
Identity = 203/240 (84.58%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60
           ME+E QNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120
           EKLRIAPDDVLVFLD KVDKATHEFDKRAPPLAKQA QITQH IQKAARTGQ+ VNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQT 120

Query: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPT AQWLE YN KVK++
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240
           RQKGYHVFDYCPEVP+SEIA+AFKQ ++KKKE   P TPEQAP K++ GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGKAKKKE-APPTTPEQAPPKNKPGSDSDSESESES 239

[Close]

BLAST of CsGy5G020960 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 204.5 bits (519), Expect = 9.7e-53
Identity = 107/240 (44.58%), Postives = 149/240 (62.08%), Query Frame = 0


Query: 1   MESESQN---LELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVT 60
           ME+E +N   + LKHL FVR+A I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVVT
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNE 120
           P Y+K +  PD +LVFLD KV + +++FD+ APP+AK+        I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKV 180
            +TGGP+AAF+YAA EYK  V+   VK+WA LN+    H   D A+P  A +   YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSD 238
            ++   GY +  Y P VPV +I KA++++++++K+       +   +    G  S SDS+
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKGETTDAADGDKSSSDSE 240

[Close]

BLAST of CsGy5G020960 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 204.5 bits (519), Expect = 9.7e-53
Identity = 107/240 (44.58%), Postives = 149/240 (62.08%), Query Frame = 0


Query: 1   MESESQN---LELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVT 60
           ME+E +N   + LKHL FVR+A I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVVT
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNE 120
           P Y+K +  PD +LVFLD KV + +++FD+ APP+AK+        I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKV 180
            +TGGP+AAF+YAA EYK  V+   VK+WA LN+    H   D A+P  A +   YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSD 238
            ++   GY +  Y P VPV +I KA++++++++K+       +   +    G  S SDS+
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKGETTDAADGDKSSSDSE 240

[Close]

BLAST of CsGy5G020960 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-30
Identity = 83/231 (35.93%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 3   SESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEK 62
           ++ +   LK+L FV+ A ++ ++    +Y  AK  SGPL+  VESVE AV TVV P YEK
Sbjct: 15  TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEK 74

Query: 63  LRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGG 122
               P +VL ++D KVD +  E D+R PP+ KQ +       Q A    + L +E +  G
Sbjct: 75  YHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAG 134

Query: 123 -----------------PRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPT 182
                            P A   YA   Y+       V  W  LN+LP F + A +AVPT
Sbjct: 135 VVETASGMAKSVYSKYEPAAKELYA--NYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPT 194

Query: 183 TAQWLESYNSKVKELRQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSP 217
            A   E YN  V +  +KGY V  Y P VP   I+K F    +++K ET P
Sbjct: 195 AAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIF----AEEKAETEP 239

[Close]

BLAST of CsGy5G020960 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-29
Identity = 66/206 (32.04%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 4   ESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAYEKL 63
           +   ++LKHL F++VA +    C + LY+ AK N+GPL+  VE++E  V TV+ P YEK 
Sbjct: 35  DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKF 94

Query: 64  RIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQTGGP 123
              P  +L+F+D KVD    + +   P L KQA+        +  RTG     +      
Sbjct: 95  HDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSV 154

Query: 124 RAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKELRQK 183
           R  +  AA  Y          +W  LN+LP F + A + +PT   W E YN  V+ +  +
Sbjct: 155 RDKYEPAAEYY-------AATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDR 214

Query: 184 GYHVFDYCPEVPVSEIAKAFKQDESK 210
            Y   +Y P +P+ +I+   +QD+ +
Sbjct: 215 DYFGAEYLPMIPIEKISDILEQDQCR 233

The following BLAST results are available for this feature:

BLAST of CsGy5G020960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF7	1.4e-51	44.58	REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=...	[more]
Q9SW70	6.3e-33	35.87	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
Q9MA63	3.3e-29	35.93	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
O82246	8.0e-28	32.04	REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=...	[more]
A2Y0H2	7.0e-24	32.38	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]

BLAST of CsGy5G020960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135320.1	4.42e-171	100.00	REF/SRPP-like protein At1g67360 [Cucumis sativus] >XP_004135321.1 REF/SRPP-like ...	[more]
XP_008446040.1	1.21e-161	95.12	PREDICTED: REF/SRPP-like protein At1g67360 [Cucumis melo] >KAA0034195.1 REF/SRPP...	[more]
XP_038893091.1	3.30e-154	91.70	REF/SRPP-like protein At1g67360 [Benincasa hispida]	[more]
XP_022998565.1	1.81e-138	85.42	REF/SRPP-like protein At1g67360 [Cucurbita maxima]	[more]
XP_022956720.1	3.65e-138	84.58	REF/SRPP-like protein At1g67360 [Cucurbita moschata]	[more]

BLAST of CsGy5G020960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS04	2.14e-171	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589910 PE=3 SV=1	[more]
A0A5D3CW84	5.84e-162	95.12	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35...	[more]
A0A1S3BEY9	5.84e-162	95.12	REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=...	[more]
A0A6J1KCW0	8.77e-139	85.42	REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111493158 PE=3...	[more]
A0A6J1GYJ5	1.77e-138	84.58	REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111458353 PE...	[more]

BLAST of CsGy5G020960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67360.2	9.7e-53	44.58	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	9.7e-53	44.58	Rubber elongation factor protein (REF)	[more]
AT3G05500.1	2.3e-30	35.93	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	5.7e-29	32.04	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 5..205 e-value: 2.1E-73 score: 246.5
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 1..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..246
None	No IPR available	PANTHER	PTHR33732:SF2	RUBBER ELONGATION FACTOR PROTEIN	coord: 1..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020960.2	CsGy5G020960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0009555	pollen development
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet