CsGy5G020330 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	F-box protein At2g35280-like
Location	Gy14Chr5: 26425723 .. 26426594 (-)
RNA-Seq Expression	CsGy5G020330
Synteny	CsGy5G020330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCAATTGAAAAGAAAGTCAGAACCATCTTTCAACTCTCAAATTTCAACGTAAGTTTAATCACTTTTCATGCATATATATATGTGTGGAATAGTTTAGTTGTTATTAATACATTTGTTAATTTTATTTTTTCTGATAATTTGTTTCTATGCAGAAGAACAAAAAAGATGTGCAGACCCTTTTCTTCATCCCTCATTGTATCACTCCCCAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCCTACATTGACTTAGTCCAAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACGGATACATATTCCAACACGTGTCTCTTGAGAACAAAAGCTTTAGGAATCTTCTATGGAACAACACACCTCAATCTCGGTCCTTCATGGAAACTCTCAACAACAATGAGAATCCAGAGAGTTTGTATCGAAAAGGGACGATGGAATTTTTCAGTCACGGTAAAGAAGCTTCAGGATTGAGTTATTTAAAACAATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTGTATGGTGTGGTTATGTACGCAGCCAATTTGAAAGAGGAAGGAGTTGAATATTTGAAGATGTGTGAGGCGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGATAAAGAATAGGATATCAATGTCGAAAGAAATTTGCAGTAATGTTAATTGTAAGGTTAATGAGAGAAGCAATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACTTGTGAACAGTGTAAATGGAGCAATGAGGTTTTGAGATTTTGCAATATGTTGAGAAGAGGAGGGTATAGTAATTAA

mRNA sequence

ATGGCGAATCAATTGAAAAGAAAGTCAGAACCATCTTTCAACTCTCAAATTTCAACAAGAACAAAAAAGATGTGCAGACCCTTTTCTTCATCCCTCATTGTATCACTCCCCAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCCTACATTGACTTAGTCCAAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACGGATACATATTCCAACACGTGTCTCTTGAGAACAAAAGCTTTAGGAATCTTCTATGGAACAACACACCTCAATCTCGGTCCTTCATGGAAACTCTCAACAACAATGAGAATCCAGAGAGTTTGTATCGAAAAGGGACGATGGAATTTTTCAGTCACGGTAAAGAAGCTTCAGGATTGAGTTATTTAAAACAATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTGTATGGTGTGGTTATGTACGCAGCCAATTTGAAAGAGGAAGGAGTTGAATATTTGAAGATGTGTGAGGCGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGATAAAGAATAGGATATCAATGTCGAAAGAAATTTGCAGTAATGTTAATTGTAAGGTTAATGAGAGAAGCAATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACTTGTGAACAGTGTAAATGGAGCAATGAGGTTTTGAGATTTTGCAATATGTTGAGAAGAGGAGGGTATAGTAATTAA

Coding sequence (CDS)

ATGGCGAATCAATTGAAAAGAAAGTCAGAACCATCTTTCAACTCTCAAATTTCAACAAGAACAAAAAAGATGTGCAGACCCTTTTCTTCATCCCTCATTGTATCACTCCCCAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCCTACATTGACTTAGTCCAAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACGGATACATATTCCAACACGTGTCTCTTGAGAACAAAAGCTTTAGGAATCTTCTATGGAACAACACACCTCAATCTCGGTCCTTCATGGAAACTCTCAACAACAATGAGAATCCAGAGAGTTTGTATCGAAAAGGGACGATGGAATTTTTCAGTCACGGTAAAGAAGCTTCAGGATTGAGTTATTTAAAACAATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTGTATGGTGTGGTTATGTACGCAGCCAATTTGAAAGAGGAAGGAGTTGAATATTTGAAGATGTGTGAGGCGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGATAAAGAATAGGATATCAATGTCGAAAGAAATTTGCAGTAATGTTAATTGTAAGGTTAATGAGAGAAGCAATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACTTGTGAACAGTGTAAATGGAGCAATGAGGTTTTGAGATTTTGCAATATGTTGAGAAGAGGAGGGTATAGTAATTAA

Protein sequence

MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECRRRVKEFVWYFWIKNRISMSKEICSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNEVLRFCNMLRRGGYSN*

Homology

[Close]

BLAST of CsGy5G020330 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.1e-15
Identity = 66/233 (28.33%), Postives = 112/233 (48.07%), Query Frame = 0


Query: 29  SSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLENKSFRN 88
           +S  + SLP DLL+E+ +   ASS   +   +L +K F    ++ Y+F  +SL+   F  
Sbjct: 20  ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEF-- 79

Query: 89  LLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYVDACYV 148
           L W+    S  F+E    + NPE+L++KG + +F    +  GL YL ++A+KG  +A YV
Sbjct: 80  LPWHE--NSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYV 139

Query: 149 YGVVM--YAANLKEEGVEYL----KMCEAKLGNKMAECRRRVKEFVWYFWIKNR--ISMS 208
           YGV++       K++G E L    K   +   N++ E R ++++  + FW  +   +   
Sbjct: 140 YGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQL 199

Query: 209 KEICSNVNCKVNER--------SNGWD-WKDEDDYYGEHTCEQCKWSNEVLRF 245
           K    +  CK + +        + GW  + DE D      CE   + N    F
Sbjct: 200 KTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACELYLYINRNFPF 248

[Close]

BLAST of CsGy5G020330 vs. NCBI nr
Match: KAE8648647.1 (hypothetical protein Csa_009058 [Cucumis sativus])

HSP 1 Score: 519 bits (1337), Expect = 7.13e-186
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60
           MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK
Sbjct: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60

Query: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120
           LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME
Sbjct: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120

Query: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180
           FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC
Sbjct: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180

Query: 181 RRRVKEFVWYFWIKNRISMSKEICSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNE 240
           RRRVKEFVWYFWIKNRISMSKEICSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNE
Sbjct: 181 RRRVKEFVWYFWIKNRISMSKEICSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNE 240

Query: 241 VLRFCNMLRRGGYSN 255
           VLRFCNMLRRGGYSN
Sbjct: 241 VLRFCNMLRRGGYSN 255

[Close]

BLAST of CsGy5G020330 vs. NCBI nr
Match: KAA0034134.1 (putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 352 bits (904), Expect = 1.40e-120
Identity = 175/232 (75.43%), Postives = 192/232 (82.76%), Query Frame = 0


Query: 24  MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLEN 83
           MC+P SS LIVSLPNDLLIEVLAKVA+SSY+DLV+AKLATKLFLHASND YIF+HVSL+N
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  KSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYV 143
           +SFRNLLWNNTP+  SF+ET NNNENPESLYRKG +EFF+H  EASGL+ LK SAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECRRRVKEFVWYFWIKNRISMSKEI 203
           DACYVYGVV+YAA+L +EG+ YLKMCE KL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 CSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNEVLRFCNMLRRGGYSN 255
                  VNER NGWDWKDEDDYYGEHTCE+CKW NEV RFCNMLR GGYSN
Sbjct: 181 -------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of CsGy5G020330 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 343 bits (879), Expect = 2.31e-116
Identity = 168/235 (71.49%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 28  FSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLENKSFR 87
           FS S+I SLPNDLLIEVLAKVAASSY DLVQAKLATK FL  SN+GYIF+HVSL N  F 
Sbjct: 5   FSPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGN--FS 64

Query: 88  NLLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYVDACY 147
            LLWNN+P+  S +ET NNNENPESLYRKG +EFF+H +EASGL YLK+SA+K Y+DACY
Sbjct: 65  KLLWNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACY 124

Query: 148 VYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECRRRVKEFVWYFWIKNRISMSKE----- 207
           VYGVV+YA NLKEEG+++L+ CEAKLGNKM+ECRRRVKEFVW  WIKN++S+S++     
Sbjct: 125 VYGVVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGR 184

Query: 208 -ICSNV---NCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNEVLRFCNMLRRGGY 253
             CSNV   NC +NE+ NGWDWKDEDD+YGEHTCE+CKW  EV RFCNMLR G Y
Sbjct: 185 RYCSNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237

[Close]

BLAST of CsGy5G020330 vs. NCBI nr
Match: XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])

HSP 1 Score: 334 bits (857), Expect = 1.10e-112
Identity = 176/260 (67.69%), Postives = 210/260 (80.77%), Query Frame = 0


Query: 3   NQLKRKSEPSFNSQISTRTKK-MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKL 62
           NQ KR S  + ++QIS  T+K      S ++I SLPNDLL EVLAKVA SSYIDL+QAKL
Sbjct: 4   NQPKRDSV-ALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKL 63

Query: 63  ATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTMEF 122
           ATK FL ASND YIFQHVSL N  FRNLLWNN+P+  SFMET NN+ENPESLYRKG +EF
Sbjct: 64  ATKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 123

Query: 123 FSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECR 182
           F+H KEASG++YLK+SAQKGYVDACYV+GV++YA+NLK+EG+E+LK  E KLGNKM ECR
Sbjct: 124 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 183

Query: 183 RRVKEFVWYFWIKNRISMSKEICS-------NVNCKVNERSNGWDWKDEDDYYGEHTCEQ 242
           +RVKEFV Y WIKN+IS+S+   S       N+NC+VNE+ N WD KDEDDYYG++TCE+
Sbjct: 184 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 243

Query: 243 CKWSNEVLRFCNMLRRGGYS 254
           CKW+NEVLRFC MLR G +S
Sbjct: 244 CKWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of CsGy5G020330 vs. NCBI nr
Match: XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 331 bits (848), Expect = 2.41e-111
Identity = 178/261 (68.20%), Postives = 200/261 (76.63%), Query Frame = 0


Query: 1   MANQLKRKSEPSFNSQISTRTKK-MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60
           MAN  K KS P F++ IS  T+K      S ++I SLPNDLL EVLAKVAASSY+DLVQA
Sbjct: 1   MANHPKTKSLP-FHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQA 60

Query: 61  KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120
           KLATK FL AS D YIFQHVSL N  F N LWNN+P+  SF+ET NNNENPESLYRKG +
Sbjct: 61  KLATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGML 120

Query: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180
           EFF+H KEASGL+YLK SAQKGYVDACYV  V++YA+  K+EG E+LK  EAKL NKMAE
Sbjct: 121 EFFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAE 180

Query: 181 CRRRVKEFVWYFWIKNRISMSKE------ICSNVNCKVNERSNGWDWKDEDDYYGEHTCE 240
           CR RVK FV Y WIKNRIS S E         N+NC+VNER N WDWKDEDDYYGE+TCE
Sbjct: 181 CRWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCE 240

Query: 241 QCKWSNEVLRFCNMLRRGGYS 254
           +CKW+NEV RFC MLR G YS
Sbjct: 241 KCKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL
Match: A0A5A7SSE7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002890 PE=4 SV=1)

HSP 1 Score: 352 bits (904), Expect = 6.79e-121
Identity = 175/232 (75.43%), Postives = 192/232 (82.76%), Query Frame = 0


Query: 24  MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLEN 83
           MC+P SS LIVSLPNDLLIEVLAKVA+SSY+DLV+AKLATKLFLHASND YIF+HVSL+N
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  KSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYV 143
           +SFRNLLWNNTP+  SF+ET NNNENPESLYRKG +EFF+H  EASGL+ LK SAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECRRRVKEFVWYFWIKNRISMSKEI 203
           DACYVYGVV+YAA+L +EG+ YLKMCE KL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 CSNVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNEVLRFCNMLRRGGYSN 255
                  VNER NGWDWKDEDDYYGEHTCE+CKW NEV RFCNMLR GGYSN
Sbjct: 181 -------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 5.35e-113
Identity = 176/260 (67.69%), Postives = 210/260 (80.77%), Query Frame = 0


Query: 3   NQLKRKSEPSFNSQISTRTKK-MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKL 62
           NQ KR S  + ++QIS  T+K      S ++I SLPNDLL EVLAKVA SSYIDL+QAKL
Sbjct: 4   NQPKRDSV-ALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKL 63

Query: 63  ATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTMEF 122
           ATK FL ASND YIFQHVSL N  FRNLLWNN+P+  SFMET NN+ENPESLYRKG +EF
Sbjct: 64  ATKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 123

Query: 123 FSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAECR 182
           F+H KEASG++YLK+SAQKGYVDACYV+GV++YA+NLK+EG+E+LK  E KLGNKM ECR
Sbjct: 124 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 183

Query: 183 RRVKEFVWYFWIKNRISMSKEICS-------NVNCKVNERSNGWDWKDEDDYYGEHTCEQ 242
           +RVKEFV Y WIKN+IS+S+   S       N+NC+VNE+ N WD KDEDDYYG++TCE+
Sbjct: 184 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 243

Query: 243 CKWSNEVLRFCNMLRRGGYS 254
           CKW+NEVLRFC MLR G +S
Sbjct: 244 CKWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL
Match: A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 1.17e-111
Identity = 178/261 (68.20%), Postives = 200/261 (76.63%), Query Frame = 0


Query: 1   MANQLKRKSEPSFNSQISTRTKK-MCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60
           MAN  K KS P F++ IS  T+K      S ++I SLPNDLL EVLAKVAASSY+DLVQA
Sbjct: 1   MANHPKTKSLP-FHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQA 60

Query: 61  KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120
           KLATK FL AS D YIFQHVSL N  F N LWNN+P+  SF+ET NNNENPESLYRKG +
Sbjct: 61  KLATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGML 120

Query: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180
           EFF+H KEASGL+YLK SAQKGYVDACYV  V++YA+  K+EG E+LK  EAKL NKMAE
Sbjct: 121 EFFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAE 180

Query: 181 CRRRVKEFVWYFWIKNRISMSKE------ICSNVNCKVNERSNGWDWKDEDDYYGEHTCE 240
           CR RVK FV Y WIKNRIS S E         N+NC+VNER N WDWKDEDDYYGE+TCE
Sbjct: 181 CRWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCE 240

Query: 241 QCKWSNEVLRFCNMLRRGGYS 254
           +CKW+NEV RFC MLR G YS
Sbjct: 241 KCKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 1.12e-106
Identity = 165/262 (62.98%), Postives = 199/262 (75.95%), Query Frame = 0


Query: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60
           MA  LKRKS+ +  SQIS +TK      S   I SLPNDLLIE+LAKVAASSY DLVQAK
Sbjct: 1   MAGSLKRKSQ-ALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120
           LATK FL AS+  YIFQH SLEN  F  LLWNN+ +  SFME  NNN NPE+LYRKG +E
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180
           FF+H +EASG++YLK SAQKGY +ACYVYG+++YA ++++EGV++LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWIKNRISMSKEI------CSNVN---CKVNERSNGWDWKDEDDYYGEHT 240
           RRRVKEFV + W+KN+IS+ ++       C NV    CK N R  GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEQCKWSNEVLRFCNMLRRGGY 253
           CE CKW+ EVLRFCNMLR G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 2.26e-106
Identity = 165/262 (62.98%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60
           MA  LKRKS+ S  S IS +TK      S   I SLPNDLLIE+LAKVAASSY DLVQAK
Sbjct: 1   MAGSLKRKSQ-SLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120
           LATK FL AS+  YIFQH SLEN  F  LLWNN+ +  SFME  NNN NPE+LYRKG +E
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180
           FF+H +EASG++YLK SAQKGY +ACYVYG+++YA ++++EGV++LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWIKNRISMSKEI------CSNVN---CKVNERSNGWDWKDEDDYYGEHT 240
           RRRVKEFV + W+KN+IS+ ++       C NV    CK N R  GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEQCKWSNEVLRFCNMLRRGGY 253
           CE CKW+ EVLRFCNMLR G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of CsGy5G020330 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.7e-16
Identity = 66/233 (28.33%), Postives = 112/233 (48.07%), Query Frame = 0


Query: 29  SSSLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLENKSFRN 88
           +S  + SLP DLL+E+ +   ASS   +   +L +K F    ++ Y+F  +SL+   F  
Sbjct: 20  ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEF-- 79

Query: 89  LLWNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYVDACYV 148
           L W+    S  F+E    + NPE+L++KG + +F    +  GL YL ++A+KG  +A YV
Sbjct: 80  LPWHE--NSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYV 139

Query: 149 YGVVM--YAANLKEEGVEYL----KMCEAKLGNKMAECRRRVKEFVWYFWIKNR--ISMS 208
           YGV++       K++G E L    K   +   N++ E R ++++  + FW  +   +   
Sbjct: 140 YGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQL 199

Query: 209 KEICSNVNCKVNER--------SNGWD-WKDEDDYYGEHTCEQCKWSNEVLRF 245
           K    +  CK + +        + GW  + DE D      CE   + N    F
Sbjct: 200 KTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACELYLYINRNFPF 248

[Close]

BLAST of CsGy5G020330 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 42.0 bits (97), Expect = 8.6e-04
Identity = 36/140 (25.71%), Postives = 66/140 (47.14%), Query Frame = 0


Query: 31  SLIVSLPNDLLIEVLAKVAASSYIDLVQAKLATKLFLHASNDGYIFQHVSLENKSFRNLL 90
           S + +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L 
Sbjct: 9   SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL- 68

Query: 91  WNNTPQSRSFMETLNNNENPESLYRKGTMEFFSHGKEASGLSYLKQSAQKGYVDACYVYG 150
             +  +    M+    N NP++ Y KG + +F+       L ++  +A  G  +A Y+Y 
Sbjct: 69  --SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYA 128

Query: 151 VVMYAANLKEEGVEYLKMCE 171
           +++      EEG  Y+   E
Sbjct: 129 MLLLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:

BLAST of CsGy5G020330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	8.1e-15	28.33	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]

BLAST of CsGy5G020330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648647.1	7.13e-186	100.00	hypothetical protein Csa_009058 [Cucumis sativus]	[more]
KAA0034134.1	1.40e-120	75.43	putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box pro...	[more]
XP_038891683.1	2.31e-116	71.49	putative F-box protein At1g67623 [Benincasa hispida]	[more]
XP_004137554.1	1.10e-112	67.69	putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot...	[more]
XP_008453691.1	2.41e-111	68.20	PREDICTED: putative F-box protein At1g67623 [Cucumis melo]	[more]

BLAST of CsGy5G020330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSE7	6.79e-121	75.43	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A0A0LS96	5.35e-113	67.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]
A0A1S3BXN2	1.17e-111	68.20	putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV...	[more]
A0A6J1JRX4	1.12e-106	62.98	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	2.26e-106	62.98	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]

BLAST of CsGy5G020330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	5.7e-16	28.33	F-box family protein	[more]
AT2G35280.1	8.6e-04	25.71	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 53..190 e-value: 1.4E-5 score: 25.7
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 33..237
None	No IPR available	PANTHER	PTHR33784:SF10	OS05G0482100 PROTEIN	coord: 33..237
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 91..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020330.2	CsGy5G020330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding