CsGy5G020310 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020310
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription termination factor MTERF5
Location	Gy14Chr5: 26419181 .. 26424640 (+)
RNA-Seq Expression	CsGy5G020310
Synteny	CsGy5G020310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGATCTTCAAAAGGGGAGAGCATTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAACAACACTACCTCTTGAGCTTTTCAAAATCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCAGGTGGAGAGTTGTGTTGTTTTTGCATCCAAATCAAGGCAGTTAGGTACGTAAATCTATTTGATGTATATTTGTTCATAGACATGTTAAACTTGAAATTGGAGGCCTTTCTGCTTCAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATGATCTTGAAATAGGGGTAGCTTTTTTTCATTCCTATTGTGAGATGACAGACATTAGAGTTATAGATAAACTTCACACACTTTCAACTATACCCTCCCGCTCTCAACATACTACAAAATCTCAAAACCTCATTCTTCCATTTATGTGTTCTCTCCCTGTAATTATCCTCTTCATCGTTCCAATCCCAACAATTAATATGTTTACAGCACTTCCGACCACCGTAATCCTTTTTCTGACCTCGAAATCTTATTCCTAACCCAAAAATACCAACCAAACTACCTAACTCTCCGGCCACATTCTGCCATATAATTTCTTAATTTCACCTCACAAATCTTAAAAAATCCAAGCCCTTCCATCTTTCAAATTGGCTGCCAAAATTTTAAATAAGCCAATCCAGGTTTCTTCACAGTGAGGGAAAAATTCCAACTTTCTTTTGATATAAACTCTCAAGATTTTCATTTGTTGCAGCAAGTTTCTAGAGAGGACCAAATAAAGAAAAGGTTTAAAATTAGATAAGTTTCCTTTTTCTAAAACAATTTTTAAGTTTAGTTTTGAAAATTGGAAATATGGAAACTTTTGAATTAAACCAATGGTTAAAACAATCATTTGCAAAATTAAAAGTTTAATTAACGATCAAAAGGGTGTAGATGGTCATCAAACAAGATCAACAACATTGATTACATGTAACAAGAAAGAACGATAGAAAAAACATAATTGAAAAATGGAGAGAAAACAAATATAAATAAATTAACTAAAAGGGAAAATTGAAATGATTATAACCAAATATGTAATTGATTCTTAGTTTAATTTTATAATCACCACTTTTCTTCATACATTTTAAATTTTACCTTAATTATATTATTTAACCTATATTACATATAGTTATTTGAAAAGGGAAAACAAACAAACAAATAAATCCTAATTAATAAAAACTAATTTCACTTTTCCTTTTTTATTAACAAAATTTGAGTAAAATGTGAGTTCTTATTTCATCCTTCCTTACCCTTTTCTTTTTTAAGGAAAAAAGTAAATTAAACATATATGTATATATATTCATTAATTTAAAAGTAGAATATGATTTAAACATTCTAAGATGATCAATAGTTAAAACCAGCCATTCTTGCACATGGTGACATTTCTTGTTAAAGGGAAAACCAAATTAGACAAAAACATTTTTAAAAAGATAACTTATGATATATATATATTTTTTGCATATCGGTAAAATTAGTGATATCATAGGACTATTAGACACCAATTAAATGACTATTGTTATTGACTCTTAAATTTTACTTTTAAAATTTAGAAAATGTAGTGACATGAATTTTATTATCATAATTTTTTTTTTTTTTTTTACTATTTTTGTAAAAATCCCAATATAATGTCAGAATCTAAAGAACAAGATACACAGGAAGAAAAGCATAGCAATAAGTGTAATTATTCCTTATAGTTTACACAGCGTAACGAGAGACTGTTTAGAGGTTCTAAAGCCAAGTTCTCATGTTGCATACTATAGTCGATAAAAGTCTCATTGGTAATCCTAAAATGGCTCAAGAAAGTTATCAAGGGAAGAGAATACAATTTCTTTTTCACACTTTAGATAAAAGTTTAATTTATTATTAAGGATAGTTGCAAATTTAGCAATTAGATTCAAAACAATTAACATTATAGCAACATTTTAAAAATTTTGCAAATATAGCAAAATTTGTCAAATTCTACTCATGATAAACTATGTTGCATTATTATTCCGGGTCAATTTCAATTTTGGTTATTATTAATAGATTTTTTTTTTTTTTTTTTTGTTTGGGTGTGGTTTAGGTGAAGGCTAGGTGACTAAGTGTGACGACGAGAAATGTGAAAGAATTGAGAGAACAACAGAATACACAAAAGGAAGAGTCGGGCGATGGGCCAAACAGACCCAGTGGCTTTTCTGCTCTCTGTGGGGATCTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCACCCTTCATTTTCTTCATTTTCTTCATTTTCTTCGTTCCAAATCACAATATGTCCAAATTTTCCTCCACATCTCTTCTACATTTCATCCATAAACGTTTTCTTAATACCATTTCTACTTCTACGTTGCCTTCACCCTCTTTTTCTACCATCCAGTTCCTCACTAATTCATGCGGCCTTTCTTCAGGATCTCCTACCTCCGGCGGTCGAAAGCTCCAATTCGATGAAAAACACATCCACCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCCAGTATCCACAGATCGCCAAATTGATCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTACTTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCTTTTTTTGTCATAAAGGAAATGCTTGAATCGGATGAACAAGTAATTGCTGCTATTTCTCGTTTTCCAAGCCTACTAATTTATAATTTGAAGGGTAATTTTAAATCTATCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGCATTGAACCCTAGAACTTCTATGCAAAAGGCTGATAGAATGATTCTTGCAGTGAAAACGGTTAAAGAATCAGGCATTGAACCAAAGGCTCCCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAACGAATCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTTCAGCATTTAAGAAATATCCATATTATTTAACTTGTTCAGAGGAGAAATTGAGGAATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATAGAGAAACTCTAATTACTTACCCTATGTTCTTCAACACTTCACTCGACAAGCGGCTCTATCCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGCAAAGATGTAAGTTAACAATGTTCTTATATTTTTGAATTTGAGCATCATGATCTTCAAAAGGGAGAGCACTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAATAACACTGCTTCTTGAGCTTTTCAAGATCTCTCTCTGTGTTTTCAGGTGGGAGAGCTGTGTTGTTTTTGCATCCAAATTAAGGCTGTTAGTCAGGTAAATCTATTTGGTGTATATTTCTTTCTTTGGACATGTTAATCTTGAAATAGGAGGCCTTTTTGTTTTCCCCTTTTCTAATCTTTTACTCTTTCCTTGAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATTGCGTTGAAATAGGGGTGGCTTTTTTTCATTCCTATTGTGGGATGACAAACATTAGACTTATAGATAAACTTCACACACTTCAAAAATTCAAGTCCTTCATCTTTCAACACAAATATACACCTTTTTGAGCCAATAGTTTTAAATAAGTCAATCCAGGCTTCTCCACATTGAGGGAAACATTCCAACATTTCTTTTCAATATAAACTCAAGATTTGGGGCTATTGTTCCCCAGAAGATTACCGAAGTTTTCGAGTGAACGTTTCAAAATATGTATCGGCAAATGTTTGGTAGCTAATTTGGCTTTCAACTTTGGGAAGAACTTCGGTTAATAAATCAATCATTTGGTATATGAAGAAAAAGGGGTTGCATATCTTTTTTGTTTCTCTTTATATAAATAAATTAAGAATTTTGGAATGAATTAACTAAACAGATATATATTGAAACCTTTTGGATTTATTTCAAATAATTTTTCACATCAACAACGATTTTAAAAACACCTCATTAATTTACTTCCTTAAC

mRNA sequence

ATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGCAAAGATGTGGGAGAGCTGTGTTGTTTTTGCATCCAAATTAAGGCTGTTAGTCAGGTAAATCTATTTGGTGTATATTTCTTTCTTTGGACATGTTAATCTTGAAATAGGAGGCCTTTTTGTTTTCCCCTTTTCTAATCTTTTACTCTTTCCTTGAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATTGCGTTGAAATAGGGGTGGCTTTTTTTCATTCCTATTGTGGGATGACAAACATTAGACTTATAGATAAACTTCACACACTTCAAAAATTCAAGTCCTTCATCTTTCAACACAAATATACACCTTTTTGAGCCAATAGTTTTAAATAAGTCAATCCAGGCTTCTCCACATTGAGGGAAACATTCCAACATTTCTTTTCAATATAAACTCAAGATTTGGGGCTATTGTTCCCCAGAAGATTACCGAAGTTTTCGAGTGAACGTTTCAAAATATGTATCGGCAAATGTTTGGTAGCTAATTTGGCTTTCAACTTTGGGAAGAACTTCGGTTAATAAATCAATCATTTGGTATATGAAGAAAAAGGGGTTGCATATCTTTTTTGTTTCTCTTTATATAAATAAATTAAGAATTTTGGAATGAATTAACTAAACAGATATATATTGAAACCTTTTGGATTTATTTCAAATAATTTTTCACATCAACAACGATTTTAAAAACACCTCATTAATTTACTTCCTTAAC

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAG

Protein sequence

MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMDIYRGNVAAETKSVL*

Homology

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BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 71/300 (23.67%), Postives = 127/300 (42.33%), Query Frame = 0


Query: 76  GFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDS 135
           G    QI  +  +  +     +   +KP  EFL ++G     +  ++   P +   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 136 QLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMI 195
            LKP+  F+ E L  D+   A +I RFP++L    R    S+ + L+  G+    I +++
Sbjct: 267 NLKPTMAFL-ETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRIL 326

Query: 196 ALNPRTFMQKA-DRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLG 255
              P        D++   ++  + L ++    +        LS+ +S  K         G
Sbjct: 327 TRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKG 386

Query: 256 WSEKEIFSAFKRYPFYLTCS-EEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQP 315
           +   EI     RY    T S +E +    D+           L+ +P+FF  S+++R++P
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKP 446

Query: 316 RYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMDIYRGNVAAETKS 374
           RY++++   V+ LL      +V+ L G +   EK V K       +M +   NV AE  S
Sbjct: 447 RYELVQRSGVRLLLN-----QVLSLSGIE--FEKVVKK------KMMKLVSNNVIAEQSS 489

[Close]

BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.3e-08
Identity = 51/252 (20.24%), Postives = 107/252 (42.46%), Query Frame = 0


Query: 69  IGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWV 128
           I +    G    Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+V
Sbjct: 220 IAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 279

Query: 129 LSKSLDSQLKPSFFFIKEILESD--EQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 188
           L   L+ ++KP+   I+ +LE    ++  A ++ ++P +L  + R    +   +  S   
Sbjct: 280 LGFGLEDKVKPN---IEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESS-- 339

Query: 189 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKK 248
                   I ++   F +  +RM  A+                       S+  +   K 
Sbjct: 340 --------ILVSSEDFGRVIERMPQAI-----------------------SLGRTAVLKH 399

Query: 249 INVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSS 308
           +N + S G+   ++       P  L  + + ++   ++  N  + D   L+ +P FF   
Sbjct: 400 VNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYG 435

Query: 309 IEKRLQPRYKVL 319
           +E  ++PR++++
Sbjct: 460 LESTVRPRHEMV 435

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BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 50/238 (21.01%), Postives = 102/238 (42.86%), Query Frame = 0


Query: 81  QISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPS 140
           Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+VL   L  ++KP+
Sbjct: 223 QVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPN 282

Query: 141 FFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPR 200
              + +I    E + A+++ ++P +L  + R    +   +  S  + SR           
Sbjct: 283 IEALVDIGVRKEAL-ASIVMQYPDVLGLELRDKLVAQQSLFESSILVSR----------E 342

Query: 201 TFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEI 260
            F +  +RM  A+                       S+  +   K +N + + G+   ++
Sbjct: 343 DFGRVLERMPQAI-----------------------SLGRAAVLKHVNFLTACGFMLSQV 402

Query: 261 FSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVL 319
                  P  L  + + +R   ++  N  + D   L+ +P FF   IE  ++PR++++
Sbjct: 403 SKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMV 426

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BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 38/166 (22.89%), Postives = 74/166 (44.58%), Query Frame = 0


Query: 68  IIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGF-VGPLLHKLILSTP 127
           ++ FF++ G    Q+  +I   P ++   + T L     FL  +G     ++ K+++  P
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 WVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 187
           +++  S+D +L+P+  F+K  +   E    +V+  FP LL  D     K + D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYAL 233
               I  M+   P+            +K+VK   ++P+ R  +  +
Sbjct: 237 GDSQIATMVTGYPQIL----------IKSVKN-SLQPRIRFLVQVM 271

[Close]

BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-07
Identity = 50/289 (17.30%), Postives = 125/289 (43.25%), Query Frame = 0


Query: 59  EKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIG-----F 118
           +K +     +I F +  G        +I+RRP IL S + + L P+ +F++ +       
Sbjct: 213 QKSVEDIERLISFLEPFGG-----IGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFA 272

Query: 119 VGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGN 178
            G +L +L    P +LS S++  +     F+K       +    +++ FP+++ +     
Sbjct: 273 TGTVLRRL----PAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERK 332

Query: 179 FKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALF 238
            +   + L   G  S  + K ++  P       + +   +  + ++G + + +   +A+ 
Sbjct: 333 LRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMG 392

Query: 239 VRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDP 298
                +    ++ I +  S G S ++I +   ++P  L  +   L +  ++ +     + 
Sbjct: 393 AVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREV 452

Query: 299 VTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEK 343
             L+ +P F    ++ R++ RY+     K+K+  +N  + +++ +  E+
Sbjct: 453 EELLAFPAFLGYKLDSRIKHRYEE----KLKSRGENMSLNKLLTVSAER 487

[Close]

BLAST of CsGy5G020310 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus])

HSP 1 Score: 709 bits (1830), Expect = 5.41e-257
Identity = 367/375 (97.87%), Postives = 370/375 (98.67%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK
Sbjct: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI
Sbjct: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND
Sbjct: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           EFFKSSIEKRLQPRYKVLEVLKVKNLLK  KI  V LLRGE+EF+EKYVVKHLDEIPNLM
Sbjct: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPV-LLRGEREFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIYRGNVAAETKSV+
Sbjct: 361 DIYRGNVAAETKSVV 374

[Close]

BLAST of CsGy5G020310 vs. NCBI nr
Match: XP_031741662.1 (transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE8648646.1 hypothetical protein Csa_008275 [Cucumis sativus])

HSP 1 Score: 631 bits (1627), Expect = 4.60e-226
Identity = 329/375 (87.73%), Postives = 344/375 (91.73%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK SST LLHFIHKRFLNTISTSTLPSPS STIQFLTNSCGLSSGSPTS GRKL FDEK
Sbjct: 1   MSKFSSTSLLHFIHKRFLNTISTSTLPSPSFSTIQFLTNSCGLSSGSPTSGGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQY AIIGF KSHGF+YPQI+ LISRRPSILQS+VS NLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           L+LSTPWVL  SLDSQLKPSFF IKE+LESDEQV AA I RFPSLLI + +GNFKS SDI
Sbjct: 121 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAA-ISRFPSLLIYNLKGNFKSISDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMIALNPRT MQKADRMI AVKTVKE GIEPKA MFIYALFVRLSMN+
Sbjct: 181 LASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNE 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINV+KSLGWSE EIFSAFK+YP+YLTCSEEKLR+VADFC N AKLD  TLITYP
Sbjct: 241 STWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
            FF +S++KRL PRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM
Sbjct: 301 MFFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIYRGNVAAETKSVL
Sbjct: 361 DIYRGNVAAETKSVL 374

[Close]

BLAST of CsGy5G020310 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1451), Expect = 2.88e-199
Identity = 287/376 (76.33%), Postives = 329/376 (87.50%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+ LLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNL 360
             F S+++KRL+PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNL
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNL 360

Query: 361 MDIYRGNVAAETKSVL 375
           MDIYRGNVA ETKSVL
Sbjct: 361 MDIYRGNVATETKSVL 374

[Close]

BLAST of CsGy5G020310 vs. NCBI nr
Match: KAA0034116.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 561 bits (1446), Expect = 1.60e-198
Identity = 292/375 (77.87%), Postives = 326/375 (86.93%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+ LLHFI  RFLNT+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           + FK S +KRL+PRYKVLEVLKVKNLLKN KIA V L+ GE+ F+EKYVVKHLDEIPNLM
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASV-LVEGERRFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIY GNV AETKSVL
Sbjct: 361 DIYVGNVEAETKSVL 373

[Close]

BLAST of CsGy5G020310 vs. NCBI nr
Match: XP_008445929.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0034114.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15807.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 560 bits (1444), Expect = 3.23e-198
Identity = 292/375 (77.87%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MS++SS+ LLHFI  RFLNTISTSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           +  QYGA+I F KSHGFE  QI+NL+SRRPSILQS+VSTNLKP+FEFLQEIG VG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
            ILSTPWVL  SLDSQLKPSF F+KEILESDEQVTAA+  R+PSLLI D + N K   D+
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAIC-RYPSLLICDLKVNLKPQLDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI +NPR+ MQK DRM  AVKTVKELGIEPKARMF+YA+ +RLSM+D
Sbjct: 181 LASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSEKEIF AFKR+P YL CSE+K+RDVADFC N AKLDP TL++YP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           + F+ S+EKRL  RYKVLEVLKVKNLLKN KIA + L +GEK F+EKYVVKHLDEIPNLM
Sbjct: 301 KLFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFL-QGEKTFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIYRGNV A+TKSVL
Sbjct: 361 DIYRGNVEAKTKSVL 373

[Close]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.40e-199
Identity = 287/376 (76.33%), Postives = 329/376 (87.50%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+ LLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNL 360
             F S+++KRL+PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNL
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNL 360

Query: 361 MDIYRGNVAAETKSVL 375
           MDIYRGNVA ETKSVL
Sbjct: 361 MDIYRGNVATETKSVL 374

[Close]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.40e-199
Identity = 287/376 (76.33%), Postives = 329/376 (87.50%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+ LLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNL 360
             F S+++KRL+PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNL
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNL 360

Query: 361 MDIYRGNVAAETKSVL 375
           MDIYRGNVA ETKSVL
Sbjct: 361 MDIYRGNVATETKSVL 374

[Close]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL
Match: A0A5A7SW09 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001070 PE=3 SV=1)

HSP 1 Score: 561 bits (1446), Expect = 7.76e-199
Identity = 292/375 (77.87%), Postives = 326/375 (86.93%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+ LLHFI  RFLNT+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           + FK S +KRL+PRYKVLEVLKVKNLLKN KIA V L+ GE+ F+EKYVVKHLDEIPNLM
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASV-LVEGERRFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIY GNV AETKSVL
Sbjct: 361 DIYVGNVEAETKSVL 373

[Close]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL
Match: A0A5D3CV65 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003110 PE=3 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 1.56e-198
Identity = 292/375 (77.87%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MS++SS+ LLHFI  RFLNTISTSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           +  QYGA+I F KSHGFE  QI+NL+SRRPSILQS+VSTNLKP+FEFLQEIG VG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
            ILSTPWVL  SLDSQLKPSF F+KEILESDEQVTAA+  R+PSLLI D + N K   D+
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAIC-RYPSLLICDLKVNLKPQLDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI +NPR+ MQK DRM  AVKTVKELGIEPKARMF+YA+ +RLSM+D
Sbjct: 181 LASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSEKEIF AFKR+P YL CSE+K+RDVADFC N AKLDP TL++YP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           + F+ S+EKRL  RYKVLEVLKVKNLLKN KIA + L +GEK F+EKYVVKHLDEIPNLM
Sbjct: 301 KLFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFL-QGEKTFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIYRGNV A+TKSVL
Sbjct: 361 DIYRGNVEAKTKSVL 373

[Close]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 1.56e-198
Identity = 291/375 (77.60%), Postives = 326/375 (86.93%), Query Frame = 0


Query: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+ LLHFI  RFLNT+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360
           + FK S +KRL+PRYKVLEVLKVKNLLKN KIA V L+ GE+ F+EKYVVKHLDEIPNLM
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASV-LVEGERRFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVL 375
           DIY GNV AETKSVL
Sbjct: 361 DIYVGNVEAETKSVL 373

[Close]

BLAST of CsGy5G020310 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-48
Identity = 119/362 (32.87%), Postives = 189/362 (52.21%), Query Frame = 0


Query: 13  IHKRFLNTISTSTLPSP-------SLS-TIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQ 72
           +  +F + ++T T  +P        LS T+ +L +SCGLS  S T A RKL  D     +
Sbjct: 43  LQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSP--ER 102

Query: 73  YGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILS 132
              ++   + HGF   QIS+L+ +RP +L +   + L PK  F   IG    LL + + S
Sbjct: 103 PNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLAS 162

Query: 133 TPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASE 192
            P +L++SL +QL PS+ F+K +L+SDE++ AA + R   + + D   N   + + +A  
Sbjct: 163 DPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAA-LRRTTWVFLEDHTKNLVPNINYMAET 222

Query: 193 GVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSM-NDSTW 252
           GVP + IK ++   P   MQK        K  +E+G  P+   F+ A+       N S W
Sbjct: 223 GVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIW 282

Query: 253 KKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFF 312
            K   V +  GWSE +I  AFK++P  +  SE K+    ++ +N   + P ++   P   
Sbjct: 283 DKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVL 342

Query: 313 KSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMDIY 366
             S+EKR+ PR  V +VL    L+K       +L+  EK F+EK V+K+ +E+P LM++Y
Sbjct: 343 FFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 401

[Close]

BLAST of CsGy5G020310 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-36
Identity = 111/379 (29.29%), Postives = 184/379 (48.55%), Query Frame = 0


Query: 2   SKISSTLLLHFIHKRFLNTISTSTLPSPSLS---------TIQFLTNSCGLSSGSPTSAG 61
           S +   + L F+  R     S S + S +L          T+ +L +SCGLS  S  S  
Sbjct: 18  STVRRIVNLGFLVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNS 77

Query: 62  R--KLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQE 121
           R  KL   +K      +++  FK HGF   QI+++I   P +L       + PK  F   
Sbjct: 78  RFVKLVSSKKP----DSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSS 137

Query: 122 IGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVI--YRFPSLLIS 181
           IGF      K+I S+P +LS SL  +L P +  +K IL  +E V   +    R  SL I+
Sbjct: 138 IGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKIT 197

Query: 182 DWRGNFKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMF 241
                      I    GVP ++IK ++  +P TF  +  R  + +  V   G +PK   F
Sbjct: 198 HC---VSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGF 257

Query: 242 IYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNA 301
           ++A+      ++S  ++K  + +  GWS+++  +A  R+P  +T S+EK+    ++ +N 
Sbjct: 258 VHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNN 317

Query: 302 AKLDPVTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKNTKIARVILLR-GEKEFMEK 361
             L    ++  P     S+EKR++PR +V+ +L  K L+K   I    +L+    EFM+K
Sbjct: 318 IGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDK 377

Query: 362 YVVKHLDEIPNLMDIYRGN 367
           +V+K+ DE+P L+  +  N
Sbjct: 378 FVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of CsGy5G020310 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-29
Identity = 93/375 (24.80%), Postives = 175/375 (46.67%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSI 92
           T+ +L +S GL++    S  RK+ F++K  +   +++    SHGF   QIS +I   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDK--NNPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDE 152
           L +    +L PK +FLQ  G     + +++ S P +L K     +   + FIK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAVIYRFPSLLISDWRGNFKS---SSDILASEGVPSRNIKKMIALNPRTFMQKADRM 212
                + +  P       +GN ++   +  +L   G+P + +  ++  + +    K ++ 
Sbjct: 174 SKNEKLCHSLP-------QGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EKF 233

Query: 213 IDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPF 272
            + +K V E+G +P    F+ AL V   MN+ T ++K+++ KSLG+   +++S+FK++P 
Sbjct: 234 EETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPI 293

Query: 273 YLTCSEEKLRD-----------------------------------VADFCLNAAKLDPV 332
            L  SE+K+ D                                     +F +        
Sbjct: 294 SLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLK 353

Query: 333 TLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKN-TKIARVILLRGEKEFMEKYVVKHL 367
            +++ P  F  S+EKR+ PR  V++ L  K L++N       +L+  ++ F+ +YV  H+
Sbjct: 354 AVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHV 413

[Close]

BLAST of CsGy5G020310 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-29
Identity = 93/375 (24.80%), Postives = 175/375 (46.67%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSI 92
           T+ +L +S GL++    S  RK+ F++K  +   +++    SHGF   QIS +I   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDK--NNPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDE 152
           L +    +L PK +FLQ  G     + +++ S P +L K     +   + FIK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAVIYRFPSLLISDWRGNFKS---SSDILASEGVPSRNIKKMIALNPRTFMQKADRM 212
                + +  P       +GN ++   +  +L   G+P + +  ++  + +    K ++ 
Sbjct: 174 SKNEKLCHSLP-------QGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EKF 233

Query: 213 IDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPF 272
            + +K V E+G +P    F+ AL V   MN+ T ++K+++ KSLG+   +++S+FK++P 
Sbjct: 234 EETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPI 293

Query: 273 YLTCSEEKLRD-----------------------------------VADFCLNAAKLDPV 332
            L  SE+K+ D                                     +F +        
Sbjct: 294 SLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLK 353

Query: 333 TLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKN-TKIARVILLRGEKEFMEKYVVKHL 367
            +++ P  F  S+EKR+ PR  V++ L  K L++N       +L+  ++ F+ +YV  H+
Sbjct: 354 AVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHV 413

[Close]

BLAST of CsGy5G020310 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 89/302 (29.47%), Postives = 146/302 (48.34%), Query Frame = 0


Query: 60  KHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLH 119
           K + Q  ++I   KS+ F   QI   I   P ++   V   L+PK  F ++IGF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLIS-DWRGNFKSSS 179
           K +     V+  SL  +L P+   +K I+    +    ++ R   LL+S D       + 
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSM 239
             L + G+    +  ++   PR F    +++   V    +LG    +RM ++A+    S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 NDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLIT 299
           ++ T+ +K+ +  + G+SE EI    +R P  + CSE+KL    +F L    L+   L  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPEFFKSSIEKRLQPRYKVLEVLKVKNLL----KNTKIARVILLRGEKEFMEKYVVKHLD 357
            P     ++EKR+ PR KVL++L+ K LL    K  K    I+   E+ F+EKYVV+  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

The following BLAST results are available for this feature:

BLAST of CsGy5G020310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.1e-09	23.67	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	6.3e-08	20.24	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.4e-07	21.01	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9SZL6	3.1e-07	22.89	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q9FK23	4.1e-07	17.30	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy5G020310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655534.2	5.41e-257	97.87	transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KA...	[more]
XP_031741662.1	4.60e-226	87.73	transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE864...	[more]
XP_008445932.1	2.88e-199	76.33	PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra...	[more]
KAA0034116.1	1.60e-198	77.87	transcription termination factor MTERF2 [Cucumis melo var. makuwa]	[more]
XP_008445929.1	3.23e-198	77.87	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]

BLAST of CsGy5G020310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWR8	1.40e-199	76.33	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEP9	1.40e-199	76.33	uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=...	[more]
A0A5A7SW09	7.76e-199	77.87	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CV65	1.56e-198	77.87	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CXX8	1.56e-198	77.60	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsGy5G020310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	3.7e-48	32.87	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.9e-36	29.29	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	3.9e-29	24.80	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	3.9e-29	24.80	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	3.3e-28	29.47	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 294..324 e-value: 1.6 score: 17.8 coord: 83..114 e-value: 7.1E-5 score: 32.2 coord: 261..292 e-value: 4.3 score: 16.3 coord: 119..150 e-value: 2.2 score: 17.3 coord: 226..256 e-value: 370.0 score: 7.2 coord: 192..222 e-value: 32.0 score: 13.4 coord: 156..187 e-value: 1800.0 score: 1.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 70..222 e-value: 6.9E-19 score: 67.9 coord: 179..335 e-value: 8.9E-20 score: 70.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 19..367
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 132..358 e-value: 8.6E-38 score: 132.0
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 19..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020310.2	CsGy5G020310.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding