CsGy5G020290 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription termination factor MTERF5
Location	Gy14Chr5: 26411459 .. 26413311 (+)
RNA-Seq Expression	CsGy5G020290
Synteny	CsGy5G020290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGCGGTGGGGATGTTCGCGGAGCTCAAAACCCTAACCAAAACCCTTCCTTCATTTTCTTCATTCTAACCCCCAATATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCACAAGCGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTTACGCTCTGTTTCTACCATCCAATTTCTCACTAATTCATGTGGCCTTTCTTCAGGATCTCCTTCTTCCAACGGTCGAATGCTCCAATTCGATGATAAAAGCATCCAGCAGTACGAATCCGTTATCGGTTTCTTGAAATCGCATGGATTCGATAATCTACAGATCGCCAATTTGGTCTCGAGGCGACCTAACATCCTTGGATCCAGAGTATCCACCAATCTCAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGATAATTTTAGCAAACCCACCGCTCCTTCTCAGGAGCTTACATTCTCATTTGAAACCATCACTTGTTTTCTTGAAGGAAATTCTTGAATCGGATGAACGAGTAATTGCTGCTATTTGTAGTTCTTCGTGGCTTCTGACTTATGATTTTGAGCGTGTTATAAAACCTAATGTTGATGTTTTGGCCAGTGAAGGAGTACCTTCAAGGAATATAGCAAAGTTGATTGCATTGGACCCTAGAACTATTATGCAAAAGGTTGATAGAATGATTCATGCAGTGAAAACGGCGAAAGAATTAGGCATCGAACCAAAGTCTGGCATGTTTATTTATGCAGTTGTTGTAAGGCTTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGGATGAGATTTTTACAGCATATAAGAAATATCCACCTTATTTAAATTGTTCAGAGGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCCAAGTTAGATCCAGGAACTCTAATTACTTACCCTAACTTCTTCACTTTTTCAGTCGAGAAGCGGCTCCAACCGAGGTACAGAGTTCTTGAGGTTTTGAAGTTGAAAAATCTTCTTAAAAACAAAAAGATTGCTCCGTTTTTTGTCGAAGGGGAGAGAAGATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGGAAAGTTGTAAGTTATCTATATATGTTCTTATAGTTTAAATTCTGCTGTATAATTCTTCATAGACATGTTAATCTTGAAATTGGTGGCCTTTTTGTTTCTCCCTTCCTAATCTTCTACTTGTGTAAGTTTGTAGAATAATTTTGAATCCCATGATGTTGAAATAAAGGTGGTTTTGTTCATTCATACTGTGAGATGAGAGAATACTCTTCAGAACTACTTAAAATATTTTGTTTTTTCAGATTGTTTATTAGTCCCTTTTCTAGTCACATCCTTGAAGCTCTGGGTGAATCACTACATCTTGCACTCAGCCATGATCTTCTTCTAAAAAAAATCCTTTCAATGCTTGTTTTCACTTGAAGATTGAAGATGGAACAGAAACAGGCAAACCCTAATGCGTAAAGACAAATGGAAAATGAGGAAGGAGGAAAGAAAATCACTTCAATGGTCTACAAAGGAGATGGAACCACTCCCACTTTGAAGGATAAGGGTGTAAGTATAATGATGTTTGAACATTTATGAAACTGATTTTGGGTTTTTGTAAATTCTTATTTTTCTTTCTTTTTGTAATTTTTTAAAAATAATTTTGCTATTTTTGCAACTTAAAAATTGTTATTCTAATTTTTAACTTCATCGTGCATTTACATTTG

mRNA sequence

GGGTGCGGTGGGGATGTTCGCGGAGCTCAAAACCCTAACCAAAACCCTTCCTTCATTTTCTTCATTCTAACCCCCAATATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCACAAGCGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTTACGCTCTGTTTCTACCATCCAATTTCTCACTAATTCATGTGGCCTTTCTTCAGGATCTCCTTCTTCCAACGGTCGAATGCTCCAATTCGATGATAAAAGCATCCAGCAGTACGAATCCGTTATCGGTTTCTTGAAATCGCATGGATTCGATAATCTACAGATCGCCAATTTGGTCTCGAGGCGACCTAACATCCTTGGATCCAGAGTATCCACCAATCTCAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGATAATTTTAGCAAACCCACCGCTCCTTCTCAGGAGCTTACATTCTCATTTGAAACCATCACTTGTTTTCTTGAAGGAAATTCTTGAATCGGATGAACGAGTAATTGCTGCTATTTGTAGTTCTTCGTGGCTTCTGACTTATGATTTTGAGCGTGTTATAAAACCTAATGTTGATGTTTTGGCCAGTGAAGGAGTACCTTCAAGGAATATAGCAAAGTTGATTGCATTGGACCCTAGAACTATTATGCAAAAGGTTGATAGAATGATTCATGCAGTGAAAACGGCGAAAGAATTAGGCATCGAACCAAAGTCTGGCATGTTTATTTATGCAGTTGTTGTAAGGCTTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGGATGAGATTTTTACAGCATATAAGAAATATCCACCTTATTTAAATTGTTCAGAGGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCCAAGTTAGATCCAGGAACTCTAATTACTTACCCTAACTTCTTCACTTTTTCAGTCGAGAAGCGGCTCCAACCGAGGTACAGAGTTCTTGAGGTTTTGAAGTTGAAAAATCTTCTTAAAAACAAAAAGATTGCTCCGTTTTTTGTCGAAGGGGAGAGAAGATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGGAAAGTTATTGAAGATGGAACAGAAACAGGCAAACCCTAATGCGTAAAGACAAATGGAAAATGAGGAAGGAGGAAAGAAAATCACTTCAATGGTCTACAAAGGAGATGGAACCACTCCCACTTTGAAGGATAAGGGTGTAAGTATAATGATGTTTGAACATTTATGAAACTGATTTTGGGTTTTTGTAAATTCTTATTTTTCTTTCTTTTTGTAATTTTTTAAAAATAATTTTGCTATTTTTGCAACTTAAAAATTGTTATTCTAATTTTTAACTTCATCGTGCATTTACATTTG

Coding sequence (CDS)

ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCACAAGCGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTTACGCTCTGTTTCTACCATCCAATTTCTCACTAATTCATGTGGCCTTTCTTCAGGATCTCCTTCTTCCAACGGTCGAATGCTCCAATTCGATGATAAAAGCATCCAGCAGTACGAATCCGTTATCGGTTTCTTGAAATCGCATGGATTCGATAATCTACAGATCGCCAATTTGGTCTCGAGGCGACCTAACATCCTTGGATCCAGAGTATCCACCAATCTCAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGATAATTTTAGCAAACCCACCGCTCCTTCTCAGGAGCTTACATTCTCATTTGAAACCATCACTTGTTTTCTTGAAGGAAATTCTTGAATCGGATGAACGAGTAATTGCTGCTATTTGTAGTTCTTCGTGGCTTCTGACTTATGATTTTGAGCGTGTTATAAAACCTAATGTTGATGTTTTGGCCAGTGAAGGAGTACCTTCAAGGAATATAGCAAAGTTGATTGCATTGGACCCTAGAACTATTATGCAAAAGGTTGATAGAATGATTCATGCAGTGAAAACGGCGAAAGAATTAGGCATCGAACCAAAGTCTGGCATGTTTATTTATGCAGTTGTTGTAAGGCTTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGGATGAGATTTTTACAGCATATAAGAAATATCCACCTTATTTAAATTGTTCAGAGGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCCAAGTTAGATCCAGGAACTCTAATTACTTACCCTAACTTCTTCACTTTTTCAGTCGAGAAGCGGCTCCAACCGAGGTACAGAGTTCTTGAGGTTTTGAAGTTGAAAAATCTTCTTAAAAACAAAAAGATTGCTCCGTTTTTTGTCGAAGGGGAGAGAAGATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAG

Protein sequence

MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDIYRGNVAAETKSVL*

Homology

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BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.5e-12
Identity = 58/258 (22.48%), Postives = 108/258 (41.86%), Query Frame = 0


Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           S Q  E  I +LK  G    ++  L++ +P+++G  +    KP  ++   +G     + +
Sbjct: 348 SFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKR 407

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNV-DV 180
           I++  P L    L   + P + FL+E+   +E +   +     LLT    + I+P V  +
Sbjct: 408 ILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFL 467

Query: 181 LASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSD 240
           L   GV  ++I K+IA+DP  +   +              +EP    +I           
Sbjct: 468 LTRAGVTQKDIGKVIAMDPALLGCSIGTK-----------LEPNMRYYI----------- 527

Query: 241 SNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYP 300
                      SLG    ++      +P  L  + + LR    +   T       LI +P
Sbjct: 528 -----------SLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFP 572

Query: 301 NFFTFSVEKRLQPRYRVL 318
            FF++S+E+R+ PR+ ++
Sbjct: 588 RFFSYSLERRIIPRHTIM 572

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BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-12
Identity = 61/295 (20.68%), Postives = 140/295 (47.46%), Query Frame = 0


Query: 65  YESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPKIILA 124
           Y S  G  +SH F  +   ++ S + N+  +      + + ++L  +G     + +++L 
Sbjct: 190 YLSTFGLKESH-FVQMYERHMPSLQINVFSA------QERLDYLLSVGVKHRDIKRMLLR 249

Query: 125 NPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVLASE- 184
            P +L  ++ ++LK  + FL  +   + ++   + ++  L +Y  E  ++P +  L  E 
Sbjct: 250 QPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEV 309

Query: 185 GVPSRNIAKLIALDPRTIMQKVDRMIHA--VKTAKELGIEPKSGMFI---YAVVVRLSMS 244
           G+   ++ K++ L P+ ++Q++D   +   +  +KELG    S + +   +  ++  S+ 
Sbjct: 310 GIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSI- 369

Query: 245 DSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCS-EEKLRDVADFCSNTAKLDPGTLIT 304
           D  +  +IN ++S+G    +I          L+ S E+ L+    +  N    +   L  
Sbjct: 370 DDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTK 429

Query: 305 YPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLD 353
           YP + + S+++R++PR+R L  ++LK + K        V  +  F +++    +D
Sbjct: 430 YPMYLSLSLDQRIRPRHRFL--VELKKVRKGPFPLSSLVPNDESFCQQWAGTSVD 474

[Close]

BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 70/274 (25.55%), Postives = 126/274 (45.99%), Query Frame = 0


Query: 101 LKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICS 160
           +KP  EFL ++G     +P I+   P +   SL  +LKP++ FL E L  D+   A I S
Sbjct: 232 IKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFL-ETLGIDKNQWAKIIS 291

Query: 161 S-SWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKV-DRMIHAVKTAKEL 220
               +LTY  ++ +   V+ L+  G+    I +++   P  +   V D++   ++  + L
Sbjct: 292 RFPAILTYSRQK-LTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSL 351

Query: 221 GIEPKSGMFIYAVVVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPP-YLNCSEEKL 280
            ++    +        LS+ +SN K         G+  DEI     +Y   Y    +E +
Sbjct: 352 NVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENV 411

Query: 281 RDVADFCSNTAKLDPGTLITYPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVE 340
               D+   T       L+ +P FF +S+++R++PRY +++   ++ LL N+ ++   +E
Sbjct: 412 MPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVR-LLLNQVLSLSGIE 471

Query: 341 GERRFVEKYVVKHLDEIPNLMDIYRGNVAAETKS 372
            E+      VVK       +M +   NV AE  S
Sbjct: 472 FEK------VVK-----KKMMKLVSNNVIAEQSS 489

[Close]

BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.7e-09
Identity = 50/253 (19.76%), Postives = 109/253 (43.08%), Query Frame = 0


Query: 68  VIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPP 127
           V+ +L+        +  ++ R P +LG ++   +     +L  IG     +  +I   P 
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 128 LLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPS 187
           +L   +   +KP +  L+ I      +   I    ++L +  E  +KPN++ L   GV  
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 188 RNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKS---GMFIYAVVVRLSMSDSNWKK 247
             +A ++A  P  +  ++   +   ++  E  I   S   G  I  +   +S+  +   K
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 248 KINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPNFFTF 307
            +N + S G+   ++       P  L  + + ++   ++  N  + D   L+ +P FFT+
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 308 SVEKRLQPRYRVL 318
            +E  ++PR+ ++
Sbjct: 423 GLESTVRPRHEMV 435

[Close]

BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.4e-09
Identity = 56/267 (20.97%), Postives = 114/267 (42.70%), Query Frame = 0


Query: 55  LQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFV 114
           L+ D++ I   E     L S G +  ++A+ +++ P IL   V   L P   F Q +G  
Sbjct: 72  LRLDERLIPMVEC----LSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVP 131

Query: 115 GPLLPKIILANPPLLLRSLHSHLKPSLVFLKEI-LESDERVIAAICSSSWLLTYDFERVI 174
              L K+IL NP L+  S+ + L   + FL  + L+ D  +   +  + +L+ Y  ++ +
Sbjct: 132 ETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRL 191

Query: 175 KPNVDVL-ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVV 234
           +P  + L +S G+    I  ++   P+ + + V++++                       
Sbjct: 192 RPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKIL----------------------- 251

Query: 235 VRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCS-EEKLRDVADFCSNTAKLD 294
                     K   + +K  G+ + +I T    YP  L  S +  L+    F        
Sbjct: 252 ----------KPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 301

Query: 295 PGTLITYPNFFTFSVEKRLQPRYRVLE 319
              + +YP FF   ++K+++ R+++++
Sbjct: 312 MDEVASYPEFFHHGLKKKVESRFKLVK 301

[Close]

BLAST of CsGy5G020290 vs. NCBI nr
Match: XP_004135534.3 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >XP_011655533.2 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >XP_031742293.1 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >KAE8648643.1 hypothetical protein Csa_007858 [Cucumis sativus])

HSP 1 Score: 726 bits (1873), Expect = 1.34e-263
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK
Sbjct: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL
Sbjct: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
           ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS
Sbjct: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
           NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN
Sbjct: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI
Sbjct: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRGNVAAETKSVL
Sbjct: 361 YRGNVAAETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. NCBI nr
Match: XP_031740903.1 (transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE8647997.1 hypothetical protein Csa_021392 [Cucumis sativus])

HSP 1 Score: 555 bits (1431), Expect = 2.84e-196
Identity = 288/373 (77.21%), Postives = 318/373 (85.25%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           M KISSTFLLHFI KR LNTISTSTLPL SVSTIQFLTNSC LSSGS +S GR LQFD+K
Sbjct: 1   MSKISSTFLLHFIFKRLLNTISTSTLPLPSVSTIQFLTNSCALSSGSTTSAGRKLQFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQQYE++IGFLKSHGF+N QIANLVSRRP+IL SRVSTNL PKF FLQEIGFVGPLLPK
Sbjct: 61  NIQQYEAIIGFLKSHGFENPQIANLVSRRPSILQSRVSTNLNPKFGFLQEIGFVGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL+NP LL RSL SHLKPS  FLKEILESDERV  A+C    LLTYDF+ VIK NVD L
Sbjct: 121 LILSNPTLLFRSLDSHLKPSFFFLKEILESDERVTTAVCRFPRLLTYDFKGVIKSNVDFL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEG+PSRNIA +IA+ P TI+QK DRMI  VKT KELGIEPK  MF+YAV+ R SMSDS
Sbjct: 181 VSEGMPSRNIANMIAMQPITILQKADRMIRVVKTVKELGIEPKGPMFVYAVLSRSSMSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
            WK K+NVMKSLGWSE+EI TA+K+YP YL CSEEK+R+VADFC NTAK DPGT+ITYP 
Sbjct: 241 TWKNKVNVMKSLGWSENEILTAFKRYPRYLTCSEEKMREVADFCFNTAKFDPGTVITYPM 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FF  SVEKRLQPRY+V+EVLK+KNLLKNKKIA   ++GER FVEK VVKHLDEIPNLMDI
Sbjct: 301 FFMCSVEKRLQPRYKVIEVLKVKNLLKNKKIAWLLLQGERNFVEKCVVKHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRG VAAETK V+
Sbjct: 361 YRGIVAAETKCVV 373

[Close]

BLAST of CsGy5G020290 vs. NCBI nr
Match: KAE8648655.1 (hypothetical protein Csa_008541 [Cucumis sativus])

HSP 1 Score: 551 bits (1420), Expect = 1.34e-194
Identity = 279/373 (74.80%), Postives = 322/373 (86.33%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFKISSTFLLHFIHKR LN+ISTSTLP  SVSTIQFLTNSCGLSSGSP+SNGR L+FD+K
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
            IQQYE++IGFLKSHGF+N QIA LVSR+P+IL S+VS NLKPKFEFLQE G VG LLPK
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL++P +LLRSL S LKPS   +KE+LE+DE V AAIC  +WLLTY  +  ++ N+D+L
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEGVPSRNIAK+I L+PRTI+Q VDR+I AVK  KELG+EPK   F++AV   LSMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKRVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
           NWKKKINVMKSLGWSE+EIFTA+KK+PPYL CSE+KLR+VADFC NTAKLDPGTLI+YP 
Sbjct: 241 NWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
            F +SVEKRL+PRY+VLEVLK+KNLLKN+K A  F  GER FVE Y+VKHLDEIPNLMDI
Sbjct: 301 LFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENYIVKHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRGNVA+ETKSVL
Sbjct: 361 YRGNVASETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. NCBI nr
Match: KAE8648666.1 (hypothetical protein Csa_008752 [Cucumis sativus])

HSP 1 Score: 550 bits (1416), Expect = 5.45e-194
Identity = 283/371 (76.28%), Postives = 320/371 (86.25%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFK SSTFLLHFIHKR LNT+STSTLPL SVSTIQFLTNSCGLSSGSP+S+GR LQFD+K
Sbjct: 1   MFKFSSTFLLHFIHKRSLNTLSTSTLPLPSVSTIQFLTNSCGLSSGSPTSHGRKLQFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQQYE++IGFLKSHGF+N QIA LVS++P+IL S+VSTNLKPKFEFLQE+GFVGPLLPK
Sbjct: 61  NIQQYEAIIGFLKSHGFENSQIAKLVSKQPSILQSKVSTNLKPKFEFLQEVGFVGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL +P +LLRSL S LKPS  F+KE+LE DE+V  AIC  S LLT + +   K  VDVL
Sbjct: 121 VILTSPAILLRSLDSQLKPSFRFMKEMLEPDEKVTTAICRYSRLLTCNIKGNFKSIVDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEGVPS+NIAK+IA  P TIM KVDR IHAVKT KELGIEP++ MF+YAV+VRLSMSDS
Sbjct: 181 VSEGVPSKNIAKMIAYKPTTIMHKVDRTIHAVKTVKELGIEPEARMFVYAVLVRLSMSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
            WKKKINVMKSLGWSE EIFTA+KKYP YL CSEEKLRDVADFC NTAKLDPG++I YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKKYPLYLTCSEEKLRDVADFCFNTAKLDPGSVIIYPK 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FF  SV +RLQPRY+VLE LK+KNLLK+KKIA   VEGER F+E YV+K+LDEIPNLMDI
Sbjct: 301 FFKCSVNERLQPRYKVLEALKVKNLLKSKKIAWLLVEGERIFLENYVLKYLDEIPNLMDI 360

Query: 361 YRGNVAAETKS 371
           YRGNV AETKS
Sbjct: 361 YRGNVVAETKS 371

[Close]

BLAST of CsGy5G020290 vs. NCBI nr
Match: XP_031741756.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE8648637.1 hypothetical protein Csa_008513 [Cucumis sativus])

HSP 1 Score: 549 bits (1414), Expect = 1.18e-193
Identity = 280/375 (74.67%), Postives = 323/375 (86.13%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           M KI STFLLHFIHKRFLN ISTSTLPL SVSTIQFLTNSC LSS SP+S GR LQFD+K
Sbjct: 1   MSKIPSTFLLHFIHKRFLNAISTSTLPLPSVSTIQFLTNSCALSSESPTSKGRKLQFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
            IQQYE+ IGFLKSHGF+N QIA LVSR+P IL  +V  NL+PKFEFLQEIGF+GPLLPK
Sbjct: 61  HIQQYEATIGFLKSHGFENSQIAKLVSRKPQILQCKVPNNLQPKFEFLQEIGFIGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +I +NP +LLRSL SHLKPS  FLKEIL SDE+V  AI  S+ LLT+DF+ ++KPNVD L
Sbjct: 121 LIASNPFILLRSLDSHLKPSFFFLKEILGSDEQVTVAISRSTRLLTFDFKGILKPNVDFL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEGVPSRNIAKL AL P  +M+KVDRMI+AVK  KE+G EPK+ MF+YAV+ RLS+SDS
Sbjct: 181 VSEGVPSRNIAKLFALQPLALMKKVDRMINAVKVVKEIGFEPKARMFVYAVLTRLSLSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
           NWKKKI+++KSLGWSE+EIFTA+KKYP ++ CSEEK+RDVADFC NT+KLDPGTLITYP 
Sbjct: 241 NWKKKIDILKSLGWSENEIFTAFKKYPLFIGCSEEKMRDVADFCLNTSKLDPGTLITYPV 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FF  SV+K+L+PRY+V+EVLK+KNLLKNKKIA  FV+GER FVEKYVVKHL+EIPNLMDI
Sbjct: 301 FFKSSVDKKLRPRYKVIEVLKVKNLLKNKKIASLFVKGEREFVEKYVVKHLNEIPNLMDI 360

Query: 361 YRGNVAAE--TKSVL 373
           YRGNV AE  TKSV+
Sbjct: 361 YRGNVEAEAETKSVV 375

[Close]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL
Match: A0A5A7SSP1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003130 PE=3 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 1.52e-193
Identity = 280/372 (75.27%), Postives = 321/372 (86.29%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           M ++SS+FLLHFI  RFLNTI TSTLP  SVSTIQFL NSCGLSS SP S  R LQFD++
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           SIQ+YE+ IGFLKSHGFDN QIA LVS+ P+IL S+VSTNLKPKFEFLQEIG VGPLLPK
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +I +NP +LLRSL SHLKPS  FLKEILESD +V AAIC S+ LLT+DF+ ++KPNVDVL
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEG+PSRNIAK+IAL P  IMQ+VDRMI AVKT KELG+EPK+ MF+YAV++RLS+SDS
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
           NW  KINV+KSLGWSE EIF A+KK P YL CSE+K+RDVADFC NTAKLDPGT+I+YP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FF  SV+KRL+PRY+VLEVLK+KNLLKNKKIA   ++GE+ FVEKYVVKHLDEIPNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSV 372
           YRGNV AETKSV
Sbjct: 361 YRGNVEAETKSV 372

[Close]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 1.25e-192
Identity = 281/373 (75.34%), Postives = 320/373 (85.79%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFK SSTFLLHFI KRFLNT+STSTLPL SVST++FLTNSCGLSSGSP+SNGR LQFD+K
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQQYE+VIGFLKSHG +N QIA LVSR+P IL S+VSTNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL+NP +  R+L S LKPS  FLKEILESDE+V AAI  S WLL  DF+ ++K N+DVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
           ASEGVPSRNIAKLI  + RTIM+KVDRMI  VKT KELGIEPK+GMF++A+ +R S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
            WKKKINVMKSLGWSE EIFTA+KK P +L CSEEK+RDVADFC NTAKLDPG++I  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
            F  SV+KRLQPRY+VLEVLK+KNLLKN  IA   V+ ER FV+K+VV+HLDEIPNLMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRGNV AETKSVL
Sbjct: 361 YRGNVTAETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL
Match: A0A1S3BEQ3 (uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 1.25e-192
Identity = 281/373 (75.34%), Postives = 320/373 (85.79%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFK SSTFLLHFI KRFLNT+STSTLPL SVST++FLTNSCGLSSGSP+SNGR LQFD+K
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQQYE+VIGFLKSHG +N QIA LVSR+P IL S+VSTNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL+NP +  R+L S LKPS  FLKEILESDE+V AAI  S WLL  DF+ ++K N+DVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
           ASEGVPSRNIAKLI  + RTIM+KVDRMI  VKT KELGIEPK+GMF++A+ +R S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
            WKKKINVMKSLGWSE EIFTA+KK P +L CSEEK+RDVADFC NTAKLDPG++I  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
            F  SV+KRLQPRY+VLEVLK+KNLLKN  IA   V+ ER FV+K+VV+HLDEIPNLMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRGNV AETKSVL
Sbjct: 361 YRGNVTAETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 1.25e-192
Identity = 274/373 (73.46%), Postives = 320/373 (85.79%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           MFK SSTFLLHFI KRFLNT+STSTLPL SVSTIQFLTNSCGLSSGSP S GR LQFD++
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           ++QQY +VIGF KSHGF++ QIA LVSR+P+IL S VSTNLKPKFEFLQEIG VGPLL K
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +IL+N  +L RSL S LKP+   +KE+L SD++V AAIC +SWLLT +    ++ N+DVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEGVPS NIA++IAL+PR++M+KVDRMI AVKT KELG+EPK GMF+YAV V +SMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
            WKKKINVMKSLGWSE+EIFTA+K++P +L CSEEK+RD+ADFC NTAKLDPGTLI+YP 
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
           FF +SV KRLQPRY+VLEVLK+KNLLK K I   FVEGERRFVEKY+VKH D+IPNL+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

Query: 361 YRGNVAAETKSVL 373
           Y GNV AETKSVL
Sbjct: 361 YLGNVKAETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL
Match: A0A5D3CX09 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002920 PE=3 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 2.05e-191
Identity = 277/373 (74.26%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60
           M KISS+FLLHF H RFLNTI TSTLPL SVSTIQFLTNSCGLSSGSP+S GR LQF +K
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120
           + QQY +VI FLKSHGF+N QIA LVSR+P+IL SRVS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180
           +I+++P +L +SL S LKPS   LKE+L SDERV AAIC +SWLLTYDF+ VIK N DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240
            SEGVPSRNIAK+IA +PRTIMQ+VD+MI  VK  KELGIEPK+GMF++A+ VR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300
           +WK+KINVMKSLGWSE+EI TA+K+YP YL CSEEK+RDVADFC NTAKLDPGTLI+YP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360
            F  S +KR+QPRY+VLEVLK+K+LL+N KIA    +GER FV+ YVVK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVAAETKSVL 373
           YRGN+AAETKSVL
Sbjct: 361 YRGNIAAETKSVL 373

[Close]

BLAST of CsGy5G020290 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.3e-52
Identity = 115/333 (34.53%), Postives = 184/333 (55.26%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPSSNGRMLQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNI 92
           T+ +L +SCGLS  S +   R L  D  S ++  +V+  L+ HGF   QI++LV +RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDE 152
           L +   + L PK  F   IG    LL + + ++P +L RSL + L PS  FLK +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 RVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAV 212
           +++AA+  ++W+   D  + + PN++ +A  GVP + I  L+   P  +MQK        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTAKELGIEPKSGMFIYAV-VVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLN 272
           K A+E+G  P+   F+ A+  +    + S W K   V +  GWSED+I  A+KK+P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKLRDVADFCSNTAKLDPGTLITYPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNK-K 332
            SE K+    ++  N   + P ++   P    FS+EKR+ PR  V +VL    L+K    
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAPFFVEGERRFVEKYVVKHLDEIPNLMDIYRG 364
           +    V  E+ F+EK V+K+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of CsGy5G020290 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 162.2 bits (409), Expect = 8.3e-40
Identity = 95/334 (28.44%), Postives = 163/334 (48.80%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPSSNGRMLQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNI 92
           T+ +L +SCGLS  S  SN R ++    S ++ +SV+   K HGF N QI +++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDE 152
           L       + PK  F   IGF      K+I ++P +L  SLH  L P    LK IL  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 RVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAV 212
            V+  +       +      +   V +    GVP ++I  L+   P T   +  R    +
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KTAKELGIEPKSGMFIYAVVVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNC 272
                 G +PK   F++A+V     S+S  ++K  + +  GWS+++   A  ++P  +  
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEEKLRDVADFCSNTAKLDPGTLITYPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIA 332
           S+EK+    ++  N   L    ++  P   + S+EKR++PR +V+ +L  K L+K + I 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 PFFV--EGERRFVEKYVVKHLDEIPNLMDIYRGN 365
            F +       F++K+V+K+ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of CsGy5G020290 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-34
Identity = 96/302 (31.79%), Postives = 153/302 (50.66%), Query Frame = 0


Query: 60  KSIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLP 119
           KS++Q  SVI  LKS+ F + QI   +   P ++   V   L+PK  F ++IGF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KIILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICS-SSW-LLTYDFERVIKPNV 179
           K +  N  ++  SL   L P++  LK I+      +  I S   W LL+ D    + PN+
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSM 239
             L + G+    +A L+   PR      +++   V  A +LG    S M ++AV+   S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 SDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLIT 299
           S+  + +K+ +  + G+SEDEI    ++ P  + CSE+KL    +F      L+   L  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPNFFTFSVEKRLQPRYRVLEVLKLKNLL-----KNKKIAPFFVEGERRFVEKYVVKHLD 355
            P   ++++EKR+ PR +VL++L+ K LL     K K +       E  F+EKYVV+  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]

BLAST of CsGy5G020290 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-30
Identity = 96/371 (25.88%), Postives = 178/371 (47.98%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPSSNGRMLQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNI 92
           T+ +L +S GL++    S  R + F+DK+    +SV+  L SHGF   QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDE 152
           L +    +L PK +FLQ  G     + +I+ + P +L +  H  +     F+K+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 RVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAV 212
                +C S  L   + E  I+ NV VL   G+P + +  L+  D + +  K ++    +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KTAKELGIEPKSGMFIYAVVVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNC 272
           K   E+G +P +  F+ A+ V   M++   ++K+++ KSLG+   ++++++KK+P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKLRDVA-----------DFCSNTAKLDP------------------------GTLIT 332
           SE+K+ D             +F        P                          +++
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNK--KIAPFFVEGERRFVEKYVVKHLDE-- 365
            P  F +S+EKR+ PR  V++ L  K L++N+   I+   +  ++ F+ +YV  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of CsGy5G020290 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-30
Identity = 96/371 (25.88%), Postives = 178/371 (47.98%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPSSNGRMLQFDDKSIQQYESVIGFLKSHGFDNLQIANLVSRRPNI 92
           T+ +L +S GL++    S  R + F+DK+    +SV+  L SHGF   QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LGSRVSTNLKPKFEFLQEIGFVGPLLPKIILANPPLLLRSLHSHLKPSLVFLKEILESDE 152
           L +    +L PK +FLQ  G     + +I+ + P +L +  H  +     F+K+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 RVIAAICSSSWLLTYDFERVIKPNVDVLASEGVPSRNIAKLIALDPRTIMQKVDRMIHAV 212
                +C S  L   + E  I+ NV VL   G+P + +  L+  D + +  K ++    +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KTAKELGIEPKSGMFIYAVVVRLSMSDSNWKKKINVMKSLGWSEDEIFTAYKKYPPYLNC 272
           K   E+G +P +  F+ A+ V   M++   ++K+++ KSLG+   ++++++KK+P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKLRDVA-----------DFCSNTAKLDP------------------------GTLIT 332
           SE+K+ D             +F        P                          +++
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPNFFTFSVEKRLQPRYRVLEVLKLKNLLKNK--KIAPFFVEGERRFVEKYVVKHLDE-- 365
            P  F +S+EKR+ PR  V++ L  K L++N+   I+   +  ++ F+ +YV  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

The following BLAST results are available for this feature:

BLAST of CsGy5G020290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IHL3	5.5e-12	22.48	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	9.3e-12	20.68	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	3.0e-10	25.55	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	5.7e-09	19.76	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
Q9SZL6	7.4e-09	20.97	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of CsGy5G020290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135534.3	1.34e-263	100.00	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >X...	[more]
XP_031740903.1	2.84e-196	77.21	transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE864...	[more]
KAE8648655.1	1.34e-194	74.80	hypothetical protein Csa_008541 [Cucumis sativus]	[more]
KAE8648666.1	5.45e-194	76.28	hypothetical protein Csa_008752 [Cucumis sativus]	[more]
XP_031741756.1	1.18e-193	74.67	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE864...	[more]

BLAST of CsGy5G020290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSP1	1.52e-193	75.27	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWA2	1.25e-192	75.34	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEQ3	1.25e-192	75.34	uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=...	[more]
A0A1S3BEV9	1.25e-192	73.46	transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi...	[more]
A0A5D3CX09	2.05e-191	74.26	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsGy5G020290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.3e-52	34.53	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	8.3e-40	28.44	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.1e-34	31.79	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	7.8e-30	25.88	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	7.8e-30	25.88	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 119..150 e-value: 3.3 score: 16.7 coord: 293..323 e-value: 0.062 score: 22.4 coord: 260..291 e-value: 160.0 score: 10.1 coord: 155..186 e-value: 11.0 score: 15.0 coord: 191..221 e-value: 180.0 score: 9.8 coord: 225..255 e-value: 54.0 score: 12.7 coord: 83..114 e-value: 1.5E-5 score: 34.5 coord: 45..78 e-value: 1600.0 score: 2.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 207..341 e-value: 5.4E-17 score: 61.7 coord: 70..221 e-value: 1.9E-20 score: 73.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 18..365
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 128..356 e-value: 5.8E-44 score: 152.2
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 18..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020290.1	CsGy5G020290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding