CsGy5G020170 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020170
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription termination factor MTERF5
Location	Gy14Chr5: 26318968 .. 26320468 (+)
RNA-Seq Expression	CsGy5G020170
Synteny	CsGy5G020170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAAATCAGACGTTAATGGGTTTTACGGTTCCCACTTCCCACAGTACCGTTGATGTTCGTGGAGCTCAAAGAACCCTAACCACAACCCTTTCTTCATTTTCTTCATTCCAAATCCCAATATGTCCAAAATCTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTGCACTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTTCCCTTTCTTCAGAATCTCCTACTTCCAAAGGTCGAAAGCTCCAATTCGATGAAAAACACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAAATCATATGGGTTCGAGAATCCACAGATCGCCAATTTGGTTTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGCTAATTCTTAAAAGCCCTACGATTCTTGTAACGAGCTTGGAATTTCAGTTGAAACCGTCATTTTTTTTCATAAAGGAAATGCTTGAACCAGATGAAAAGGTAACTGCTGCTATTTGTCGTTCTCCAAAGCTTATAACTTCTAATTATAAGGGTGAATTGGAATCCATCGTTGACGTTTTGGTCAGTGAAGGAGTACCTTCTAAGAATATAGCCAGAATGATTGCATATAAGCCTGCAACTATTATGCATAAGGTTGATAGAATGATTGATGTAGTGAAAAGGGTTAAAGAATTAGGCTTTGAACCAAAGGCTCGCATGTTTGTTTATGCAGTTTTAGCAAGGATTTCAATGAGTGATTCAACGTGGAAGAGGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGATCCAAACTATTTAAGTTGTTCGGAGGATAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTGTAATTTGTTACCCGAAGTTCTTCAAATTTTCAGTCGACAAGCGACTCCAACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATTCCAAATCTGATGGACATATACAAGGGCAATGTGGAAACAGAAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATCTTCATCATGATCTTCTTCCAACTTGAGGCTCTTACATAATTCTTTCAACTTTTCTAAGTTTGTGTGTACTAATTTTGTATCTAATGATCTTGAAATGGACGTGATTTTTTTCATTCATATTGTGAGATGAGAGACATGGGACTTCTATCTCATTTTTATGCTTAGCTTTGAATATTAAACTTCTACACCATTTTTATGCTTAGATTGTATATTCAATAATTCTACC

mRNA sequence

TTCAAAATCAGACGTTAATGGGTTTTACGGTTCCCACTTCCCACAGTACCGTTGATGTTCGTGGAGCTCAAAGAACCCTAACCACAACCCTTTCTTCATTTTCTTCATTCCAAATCCCAATATGTCCAAAATCTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTGCACTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTTCCCTTTCTTCAGAATCTCCTACTTCCAAAGGTCGAAAGCTCCAATTCGATGAAAAACACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAAATCATATGGGTTCGAGAATCCACAGATCGCCAATTTGGTTTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGCTAATTCTTAAAAGCCCTACGATTCTTGTAACGAGCTTGGAATTTCAGTTGAAACCGTCATTTTTTTTCATAAAGGAAATGCTTGAACCAGATGAAAAGGTAACTGCTGCTATTTGTCGTTCTCCAAAGCTTATAACTTCTAATTATAAGGGTGAATTGGAATCCATCGTTGACGTTTTGGTCAGTGAAGGAGTACCTTCTAAGAATATAGCCAGAATGATTGCATATAAGCCTGCAACTATTATGCATAAGGTTGATAGAATGATTGATGTAGTGAAAAGGGTTAAAGAATTAGGCTTTGAACCAAAGGCTCGCATGTTTGTTTATGCAGTTTTAGCAAGGATTTCAATGAGTGATTCAACGTGGAAGAGGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGATCCAAACTATTTAAGTTGTTCGGAGGATAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTGTAATTTGTTACCCGAAGTTCTTCAAATTTTCAGTCGACAAGCGACTCCAACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATTCCAAATCTGATGGACATATACAAGGGCAATGTGGAAACAGAAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATCTTCATCATGATCTTCTTCCAACTTGAGGCTCTTACATAATTCTTTCAACTTTTCTAAGTTTGTGTGTACTAATTTTGTATCTAATGATCTTGAAATGGACGTGATTTTTTTCATTCATATTGTGAGATGAGAGACATGGGACTTCTATCTCATTTTTATGCTTAGCTTTGAATATTAAACTTCTACACCATTTTTATGCTTAGATTGTATATTCAATAATTCTACC

Coding sequence (CDS)

ATGTCCAAAATCTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTGCACTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTTCCCTTTCTTCAGAATCTCCTACTTCCAAAGGTCGAAAGCTCCAATTCGATGAAAAACACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAAATCATATGGGTTCGAGAATCCACAGATCGCCAATTTGGTTTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGCTAATTCTTAAAAGCCCTACGATTCTTGTAACGAGCTTGGAATTTCAGTTGAAACCGTCATTTTTTTTCATAAAGGAAATGCTTGAACCAGATGAAAAGGTAACTGCTGCTATTTGTCGTTCTCCAAAGCTTATAACTTCTAATTATAAGGGTGAATTGGAATCCATCGTTGACGTTTTGGTCAGTGAAGGAGTACCTTCTAAGAATATAGCCAGAATGATTGCATATAAGCCTGCAACTATTATGCATAAGGTTGATAGAATGATTGATGTAGTGAAAAGGGTTAAAGAATTAGGCTTTGAACCAAAGGCTCGCATGTTTGTTTATGCAGTTTTAGCAAGGATTTCAATGAGTGATTCAACGTGGAAGAGGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGATCCAAACTATTTAAGTTGTTCGGAGGATAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTGTAATTTGTTACCCGAAGTTCTTCAAATTTTCAGTCGACAAGCGACTCCAACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATTCCAAATCTGATGGACATATACAAGGGCAATGTGGAAACAGAAGCCGAAACCAAAAGTGTTGTATAG

Protein sequence

MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEKHIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKGNVETEAETKSVV*

Homology

[Close]

BLAST of CsGy5G020170 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-11
Identity = 59/281 (21.00%), Postives = 121/281 (43.06%), Query Frame = 0


Query: 63  QQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLI 122
           Q  E  I + K +G    ++  L++ +P ++   +    KP  ++   +G     + +++
Sbjct: 350 QVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRIL 409

Query: 123 LKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSN-YKGELESIVDVLV 182
           +  P +    LE  + P   F++EM  P+E +   + + P L+T++ YK     ++ +L 
Sbjct: 410 VVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLT 469

Query: 183 SEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDST 242
             GV  K+I ++IA  PA +   +   +           EP  R ++             
Sbjct: 470 RAGVTQKDIGKVIAMDPALLGCSIGTKL-----------EPNMRYYI------------- 529

Query: 243 WKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPKF 302
                    SLG    ++       P  L  + D +R    +   T       +I +P+F
Sbjct: 530 ---------SLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRF 589

Query: 303 FKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREF 343
           F +S+++R+ PR+ ++    V+N + N K+ ++L   + EF
Sbjct: 590 FSYSLERRIIPRHTIM----VENRV-NFKLRYMLACTDEEF 592

[Close]

BLAST of CsGy5G020170 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.2e-10
Identity = 54/273 (19.78%), Postives = 123/273 (45.05%), Query Frame = 0


Query: 59  EKHIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLL 118
           +K ++  E +I F + +G        +++RRP IL S + + L P+ +F++ +       
Sbjct: 213 QKSVEDIERLISFLEPFGG-----IGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFA 272

Query: 119 HKLILKS-PTILVTSLEFQLKPSFFFIKEMLE-PDEKVTAAICRSPKLITSNYKGELESI 178
              +L+  P IL  S+E  +     F+K       E+V   +   P +I+++ + +L   
Sbjct: 273 TGTVLRRLPAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPR 332

Query: 179 VDVLVSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARIS 238
           ++ L   G  S  + + ++  P  +    + +   +  + ++G++ + +   +A+ A   
Sbjct: 333 IEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTR 392

Query: 239 MSDSTWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVI 298
            S    +R I +  S G S ++IL    K P  L  +   + +  ++       +   ++
Sbjct: 393 TSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELL 452

Query: 299 CYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNK 330
            +P F  + +D R++ RY+     + +N+  NK
Sbjct: 453 AFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNK 479

[Close]

BLAST of CsGy5G020170 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 60/276 (21.74%), Postives = 126/276 (45.65%), Query Frame = 0


Query: 76  GFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILVTSLEF 135
           G    QI  +  +  +     +   +KP  EFL ++G     +  ++ K P I   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 136 QLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNIARMIA 195
            LKP+  F++ +     +    I R P ++T + + +L S V+ L   G+  + I R++ 
Sbjct: 267 NLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILT 326

Query: 196 YKPATIMHKV-DRMIDVVKRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLKSLGW 255
             P  + + V D++   ++  + L  +    +        +S+ +S  K         G+
Sbjct: 327 RCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKGF 386

Query: 256 SEKEI-LTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPR 315
              EI +   +    Y    ++ +    D+ F T       ++ +P+FF +S+ +R++PR
Sbjct: 387 GLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKPR 446

Query: 316 YKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVK 350
           Y++++   V+ LL N+ ++   +E E+  V+K ++K
Sbjct: 447 YELVQRSGVR-LLLNQVLSLSGIEFEK-VVKKKMMK 477

[Close]

BLAST of CsGy5G020170 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-04
Identity = 41/129 (31.78%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 23  TSALPSPSVSTIQFLTNSCSLSSES-PTSKGRKLQFDEKHIQ-QYEAIIGFFKSYGFENP 82
           TS   S  +  ++FL+N  S+S +  P S  R  +     +  Q    + F K+ GF   
Sbjct: 94  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 153

Query: 83  QIANLVSRRPSILQSRVSTNLKPKFEFLQE-IGFVGPLLHKLILKSPTILVTSLEFQLKP 142
               + SR   +L S V   L PK E+L+E +GF    + K++++SP +L  S++  L P
Sbjct: 154 D--TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVP 213

Query: 143 SF-FFIKEM 148
              FFI+EM
Sbjct: 214 KVEFFIEEM 220

[Close]

BLAST of CsGy5G020170 vs. NCBI nr
Match: XP_031741758.1 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >KAE8648638.1 hypothetical protein Csa_008093 [Cucumis sativus])

HSP 1 Score: 730 bits (1884), Expect = 3.31e-265
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK
Sbjct: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL
Sbjct: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS
Sbjct: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK
Sbjct: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI
Sbjct: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           YKGNVETEAETKSVV
Sbjct: 361 YKGNVETEAETKSVV 375

[Close]

BLAST of CsGy5G020170 vs. NCBI nr
Match: KAE8648666.1 (hypothetical protein Csa_008752 [Cucumis sativus])

HSP 1 Score: 577 bits (1487), Expect = 9.21e-205
Identity = 297/373 (79.62%), Postives = 330/373 (88.47%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           M K SSTFLLHFIHKR LNT+STS LP PSVSTIQFLTNSC LSS SPTS GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIHKRSLNTLSTSTLPLPSVSTIQFLTNSCGLSSGSPTSHGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           +IQQYEAIIGF KS+GFEN QIA LVS++PSILQS+VSTNLKPKFEFLQE+GFVGPLL K
Sbjct: 61  NIQQYEAIIGFLKSHGFENSQIAKLVSKQPSILQSKVSTNLKPKFEFLQEVGFVGPLLPK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           +IL SP IL+ SL+ QLKPSF F+KEMLEPDEKVT AICR  +L+T N KG  +SIVDVL
Sbjct: 121 VILTSPAILLRSLDSQLKPSFRFMKEMLEPDEKVTTAICRYSRLLTCNIKGNFKSIVDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPSKNIA+MIAYKP TIMHKVDR I  VK VKELG EP+ARMFVYAVL R+SMSDS
Sbjct: 181 VSEGVPSKNIAKMIAYKPTTIMHKVDRTIHAVKTVKELGIEPEARMFVYAVLVRLSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK+KINV+KSLGWSEKEI TAFKK P YL+CSE+K+RDVADFCFNTAKLDPG+VI YPK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKKYPLYLTCSEEKLRDVADFCFNTAKLDPGSVIIYPK 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           FFK SV++RLQPRYKV+E LKVKNLLK+KKIAWLL+E ER F+E Y++K+LDEIPNLMDI
Sbjct: 301 FFKCSVNERLQPRYKVLEALKVKNLLKSKKIAWLLVEGERIFLENYVLKYLDEIPNLMDI 360

Query: 361 YKGNVETEAETKS 373
           Y+GNV   AETKS
Sbjct: 361 YRGNVV--AETKS 371

[Close]

BLAST of CsGy5G020170 vs. NCBI nr
Match: XP_031740903.1 (transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE8647997.1 hypothetical protein Csa_021392 [Cucumis sativus])

HSP 1 Score: 563 bits (1451), Expect = 2.78e-199
Identity = 293/375 (78.13%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKISSTFLLHFI KR LNTISTS LP PSVSTIQFLTNSC+LSS S TS GRKLQFDEK
Sbjct: 1   MSKISSTFLLHFIFKRLLNTISTSTLPLPSVSTIQFLTNSCALSSGSTTSAGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           +IQQYEAIIGF KS+GFENPQIANLVSRRPSILQSRVSTNL PKF FLQEIGFVGPLL K
Sbjct: 61  NIQQYEAIIGFLKSHGFENPQIANLVSRRPSILQSRVSTNLNPKFGFLQEIGFVGPLLPK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LIL +PT+L  SL+  LKPSFFF+KE+LE DE+VT A+CR P+L+T ++KG ++S VD L
Sbjct: 121 LILSNPTLLFRSLDSHLKPSFFFLKEILESDERVTTAVCRFPRLLTYDFKGVIKSNVDFL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEG+PS+NIA MIA +P TI+ K DRMI VVK VKELG EPK  MFVYAVL+R SMSDS
Sbjct: 181 VSEGMPSRNIANMIAMQPITILQKADRMIRVVKTVKELGIEPKGPMFVYAVLSRSSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK K+NV+KSLGWSE EILTAFK+ P YL+CSE+KMR+VADFCFNTAK DPGTVI YP 
Sbjct: 241 TWKNKVNVMKSLGWSENEILTAFKRYPRYLTCSEEKMREVADFCFNTAKFDPGTVITYPM 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           FF  SV+KRLQPRYKVIEVLKVKNLLKNKKIAWLLL+ ER FVEK +VKHLDEIPNLMDI
Sbjct: 301 FFMCSVEKRLQPRYKVIEVLKVKNLLKNKKIAWLLLQGERNFVEKCVVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           Y+G V   AETK VV
Sbjct: 361 YRGIVA--AETKCVV 373

[Close]

BLAST of CsGy5G020170 vs. NCBI nr
Match: XP_031741756.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE8648637.1 hypothetical protein Csa_008513 [Cucumis sativus])

HSP 1 Score: 555 bits (1431), Expect = 3.30e-196
Identity = 283/375 (75.47%), Postives = 324/375 (86.40%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKI STFLLHFIHKRFLN ISTS LP PSVSTIQFLTNSC+LSSESPTSKGRKLQFDEK
Sbjct: 1   MSKIPSTFLLHFIHKRFLNAISTSTLPLPSVSTIQFLTNSCALSSESPTSKGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIQQYEA IGF KS+GFEN QIA LVSR+P ILQ +V  NL+PKFEFLQEIGF+GPLL K
Sbjct: 61  HIQQYEATIGFLKSHGFENSQIAKLVSRKPQILQCKVPNNLQPKFEFLQEIGFIGPLLPK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LI  +P IL+ SL+  LKPSFFF+KE+L  DE+VT AI RS +L+T ++KG L+  VD L
Sbjct: 121 LIASNPFILLRSLDSHLKPSFFFLKEILGSDEQVTVAISRSTRLLTFDFKGILKPNVDFL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPS+NIA++ A +P  +M KVDRMI+ VK VKE+GFEPKARMFVYAVL R+S+SDS
Sbjct: 181 VSEGVPSRNIAKLFALQPLALMKKVDRMINAVKVVKEIGFEPKARMFVYAVLTRLSLSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
            WK+KI++LKSLGWSE EI TAFKK P ++ CSE+KMRDVADFC NT+KLDPGT+I YP 
Sbjct: 241 NWKKKIDILKSLGWSENEIFTAFKKYPLFIGCSEEKMRDVADFCLNTSKLDPGTLITYPV 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           FFK SVDK+L+PRYKVIEVLKVKNLLKNKKIA L ++ EREFVEKY+VKHL+EIPNLMDI
Sbjct: 301 FFKSSVDKKLRPRYKVIEVLKVKNLLKNKKIASLFVKGEREFVEKYVVKHLNEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           Y+GNVE EAETKSVV
Sbjct: 361 YRGNVEAEAETKSVV 375

[Close]

BLAST of CsGy5G020170 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus])

HSP 1 Score: 555 bits (1430), Expect = 4.52e-196
Identity = 286/376 (76.06%), Postives = 323/376 (85.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKISST LLHFIHKRFLNTISTS LPSPS+STIQFLTNSC LSS SPTS GRKL FDEK
Sbjct: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QY AIIGFFKS+GFE PQI+NL+SRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAIC-RSPKLITSNYKGELESIVDV 180
           LIL +P +L  SL+ QLKPSFFFIKE+LE DE+VTAA+  R P L+ S+++G  +S  D+
Sbjct: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180

Query: 181 LVSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSD 240
           L SEGVPS+NI +MIA  P T M K DRMID VK VKELG EPKARMF+YA+  R+SM+D
Sbjct: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240

Query: 241 STWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYP 300
           STWK+KINV+KSLGWSEKEI +AFK+ P YL+CSE+K+RDVADFC N AKLDP T+I YP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300

Query: 301 KFFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMD 360
           +FFK S++KRLQPRYKV+EVLKVKNLLK KKI  +LL  EREFVEKY+VKHLDEIPNLMD
Sbjct: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360

Query: 361 IYKGNVETEAETKSVV 375
           IY+GNV   AETKSVV
Sbjct: 361 IYRGNVA--AETKSVV 374

[Close]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL
Match: A0A5A7SW09 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001070 PE=3 SV=1)

HSP 1 Score: 551 bits (1419), Expect = 9.97e-195
Identity = 286/375 (76.27%), Postives = 320/375 (85.33%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKISS+FLLHFI  RFLNT+ST+ LP PSVSTIQFLTNSC LSS SPTS GRKLQFDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIQQY AII F KS GFEN QIA LVSR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LI+  P IL  SL+ QLKPSFFF+KE+LE DE+VT AI R P L+  + KG+L+  +DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPS+NI+RMI+ +P  IM KVDR+I  VK VKELG EPKAR FVYAV+ R+SMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK+KINV+KSLGWS+KEI TAFK+ PNYL CSE+K+RDVADFCFNTAKLDPGT+I YPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            FK S DKRL+PRYKV+EVLKVKNLLKNKKIA +L+E ER FVEKY+VKHLDEIPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           Y GNVE  AETKSV+
Sbjct: 361 YVGNVE--AETKSVL 373

[Close]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 2.01e-194
Identity = 285/375 (76.00%), Postives = 320/375 (85.33%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSK+SS+FLLHFI  RFLNT+ST+ LP PSVSTIQFLTNSC LSS SPTS GRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIQQY AII F KS GFEN QIA LVSR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LI+  P IL  SL+ QLKPSFFF+KE+LE DE+VT AI R P L+  + KG+L+  +DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPS+NI+RMI+ +P  IM KVDR+I  VK VKELG EPKAR FVYAV+ R+SMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK+KINV+KSLGWS+KEI TAFK+ PNYL CSE+K+RDVADFCFNTAKLDPGT+I YPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            FK S DKRL+PRYKV+EVLKVKNLLKNKKIA +L+E ER FVEKY+VKHLDEIPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           Y GNVE  AETKSV+
Sbjct: 361 YVGNVE--AETKSVL 373

[Close]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL
Match: A0A1S3BDE1 (transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488812 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 2.01e-194
Identity = 285/375 (76.00%), Postives = 320/375 (85.33%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSK+SS+FLLHFI  RFLNT+ST+ LP PSVSTIQFLTNSC LSS SPTS GRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIQQY AII F KS GFEN QIA LVSR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LI+  P IL  SL+ QLKPSFFF+KE+LE DE+VT AI R P L+  + KG+L+  +DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEGVPS+NI+RMI+ +P  IM KVDR+I  VK VKELG EPKAR FVYAV+ R+SMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK+KINV+KSLGWS+KEI TAFK+ PNYL CSE+K+RDVADFCFNTAKLDPGT+I YPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            FK S DKRL+PRYKV+EVLKVKNLLKNKKIA +L+E ER FVEKY+VKHLDEIPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSVV 375
           Y GNVE  AETKSV+
Sbjct: 361 YVGNVE--AETKSVL 373

[Close]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL
Match: A0A5A7SYC3 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003050 PE=3 SV=1)

HSP 1 Score: 549 bits (1414), Expect = 6.18e-194
Identity = 284/376 (75.53%), Postives = 317/376 (84.31%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MSKISS+FLLHF   R LNT+STS LP PSVSTIQFLTNSC LSS SPTS GRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           + QQY A+I F KS+GFEN QIANLVSRRPSILQS+VS NLKP+FEFLQEIG VGPLL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
            IL +P +L +SL+ QLKPSFFFIKE+LE DE+VTAAICR P L+  + KG L+S +D+L
Sbjct: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
            SEGVPS+NIARMIA+KP TI  KVD MI+ VK VKELG EPKARMF YAV  R+SMSDS
Sbjct: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
           TWK+K+ V+KSLGWSEKEI TAFKKDPNYL CSE KMRDVADFCFNTAKLDPGTVI YP 
Sbjct: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIA--WLLLEREREFVEKYIVKHLDEIPNLM 360
           FFK+SVDKRL+PRYKV+EVLKVKNLLKNKKIA  W   + EREFV+  +VKHLDEIPNLM
Sbjct: 301 FFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFVQNNVVKHLDEIPNLM 360

Query: 361 DIYKGNVETEAETKSV 374
           DIY+GN    +ETKSV
Sbjct: 361 DIYRGN--DASETKSV 374

[Close]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL
Match: A0A5A7SSP1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003130 PE=3 SV=1)

HSP 1 Score: 544 bits (1402), Expect = 3.85e-192
Identity = 284/374 (75.94%), Postives = 318/374 (85.03%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60
           MS++SS+FLLHFI  RFLNTI TS LP  SVSTIQFL NSC LSSESP S  RKLQFDE+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
            IQ+YEA IGF KS+GF+N QIA LVS+ PSILQS+VSTNLKPKFEFLQEIG VGPLL K
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180
           LI  +P IL+ SL+  LKPSFFF+KE+LE D +VTAAICRS +L+T ++KG L+  VDVL
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240
           VSEG+PS+NIA+MIA +P  IM +VDRMI  VK VKELG EPKARMFVYAVL R+S+SDS
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300
            W  KINVLKSLGWSEKEI  AFKKDPNYL CSE KMRDVADFCFNTAKLDPGTVI YP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           FFK SVDKRL+PRYKV+EVLKVKNLLKNKKIA +LL+ E+ FVEKY+VKHLDEIPNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YKGNVETEAETKSV 374
           Y+GNVE  AETKSV
Sbjct: 361 YRGNVE--AETKSV 372

[Close]

BLAST of CsGy5G020170 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-47
Identity = 109/333 (32.73%), Postives = 179/333 (53.75%), Query Frame = 0


Query: 33  TIQFLTNSCSLSSESPTSKGRKLQFDEKHIQQYEAIIGFFKSYGFENPQIANLVSRRPSI 92
           T+ +L +SC LS +S T   RKL  D    ++   ++   + +GF   QI++LV +RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILVTSLEFQLKPSFFFIKEMLEPDE 152
           L +   + L PK  F   IG    LL + +   PTIL  SL  QL PS+ F+K +L+ DE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 KVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNIARMIAYKPATIMHKVDRMIDVV 212
           K+ AA+ R+  +   ++   L   ++ +   GVP K I  ++ + P  +M K      + 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KRVKELGFEPKARMFVYAVLARISMSD-STWKRKINVLKSLGWSEKEILTAFKKDPNYLS 272
           K+ +E+GF P+   FV A+ A     + S W +   V +  GWSE +I+ AFKK P+ + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEDKMRDVADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNK-K 332
            SE K+    ++  N   + P ++   P    FS++KR+ PR  V +VL    L+K    
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 364
           +  LL+  E+ F+EK ++K+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of CsGy5G020170 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 96/334 (28.74%), Postives = 173/334 (51.80%), Query Frame = 0


Query: 33  TIQFLTNSCSLSSESPTSKGRKLQFDEKHIQQYEAIIGFFKSYGFENPQIANLVSRRPSI 92
           T+ +L +SC LS ES  S  R ++      ++ ++++  FK +GF N QI +++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSS--KKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILVTSLEFQLKPSFFFIKEMLEPDE 152
           L       + PK  F   IGF      K+I  SP +L  SL  +L P +  +K +L  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 KVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNIARMIAYKPATIMHKVDRMIDVV 212
            V   + R  +  +      +   V +    GVP K+I  ++   P T   +  R  +V+
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLKSLGWSEKEILTAFKKDPNYLSC 272
            RV   GF+PK   FV+A++A    S+S  +RK  + +  GWS+++ + A  + PN ++ 
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEDKMRDVADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIA 332
           S++K+    ++  N   L    ++  P     S++KR++PR +VI +L  K L+K + I 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 W--LLLEREREFVEKYIVKHLDEIPNLMDIYKGN 365
           +  +L  +  EF++K+++K+ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of CsGy5G020170 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-30
Identity = 97/354 (27.40%), Postives = 178/354 (50.28%), Query Frame = 0


Query: 18  LNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDE-KHIQQYEAIIGFFKSYG 77
           L+  S++A P+ S+S   F+        + P +    +++   K ++Q  ++I   KSY 
Sbjct: 24  LHHFSSNATPA-SISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYS 83

Query: 78  FENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILVTSLEFQ 137
           F + QI   +   P ++   V   L+PK  F ++IGF G  L K + ++ +++  SL  +
Sbjct: 84  FSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKK 143

Query: 138 LKPSFFFIKEMLEP-DEKVTAAICRSPKLITSNYKG-ELESIVDVLVSEGVPSKNIARMI 197
           L P+   +K ++ P  E +   + R   L+ S      L   +  L + G+    +A ++
Sbjct: 144 LIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLL 203

Query: 198 AYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLKSLGW 257
             +P       +++   V R  +LGF   +RM V+AV++  S+S+ T+ RK+ +  + G+
Sbjct: 204 RRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGF 263

Query: 258 SEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRY 317
           SE EI    ++ P  + CSEDK+    +F      L+   +   P    ++++KR+ PR 
Sbjct: 264 SEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRL 323

Query: 318 KVIEVLKVKNLL-----KNKKIAWLLLEREREFVEKYIVKHLDEI-PNLMDIYK 363
           KV+++L+ K LL     K K +  ++   E  F+EKY+V+  DEI   L+  YK
Sbjct: 324 KVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of CsGy5G020170 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-26
Identity = 98/393 (24.94%), Postives = 182/393 (46.31%), Query Frame = 0


Query: 17  FLNTISTSALPSPSVS------TIQFLTNSCSLSSESPTSKGRKLQFDEKHIQQYEAIIG 76
           F ++ S + L SP V       T+ +L +S  L+++   S  RK+ F++K+    ++++ 
Sbjct: 33  FFSSASAACL-SPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLN 92

Query: 77  FFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILV 136
              S+GF   QI+ ++   P +L +    +L PK +FLQ  G     + +++   P IL 
Sbjct: 93  LLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILG 152

Query: 137 TSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNI 196
                 +   + FIK+ L         +C S  L   N + ++ + V VL   G+P K +
Sbjct: 153 KKGHKTISVYYDFIKDTLLEKSSKNEKLCHS--LPQGNLENKIRN-VSVLRELGMPHKLL 212

Query: 197 ARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLK 256
             ++      +  K ++  + +K+V E+GF+P    FV A+     M++ T + K+++ K
Sbjct: 213 FSLLISDSQPVCGK-EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYK 272

Query: 257 SLGWSEKEILTAFKKDPNYLSCSEDKMRD------------------------------- 316
           SLG+   ++ ++FKK P  L  SE KM D                               
Sbjct: 273 SLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTE 332

Query: 317 ----VADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNK--KIAW 365
                 +F           V+  P  F +S++KR+ PR  VI+ L  K L++N+   I+ 
Sbjct: 333 TVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISC 392

[Close]

BLAST of CsGy5G020170 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-26
Identity = 98/393 (24.94%), Postives = 182/393 (46.31%), Query Frame = 0


Query: 17  FLNTISTSALPSPSVS------TIQFLTNSCSLSSESPTSKGRKLQFDEKHIQQYEAIIG 76
           F ++ S + L SP V       T+ +L +S  L+++   S  RK+ F++K+    ++++ 
Sbjct: 33  FFSSASAACL-SPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLN 92

Query: 77  FFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILKSPTILV 136
              S+GF   QI+ ++   P +L +    +L PK +FLQ  G     + +++   P IL 
Sbjct: 93  LLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILG 152

Query: 137 TSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVLVSEGVPSKNI 196
                 +   + FIK+ L         +C S  L   N + ++ + V VL   G+P K +
Sbjct: 153 KKGHKTISVYYDFIKDTLLEKSSKNEKLCHS--LPQGNLENKIRN-VSVLRELGMPHKLL 212

Query: 197 ARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDSTWKRKINVLK 256
             ++      +  K ++  + +K+V E+GF+P    FV A+     M++ T + K+++ K
Sbjct: 213 FSLLISDSQPVCGK-EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYK 272

Query: 257 SLGWSEKEILTAFKKDPNYLSCSEDKMRD------------------------------- 316
           SLG+   ++ ++FKK P  L  SE KM D                               
Sbjct: 273 SLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTE 332

Query: 317 ----VADFCFNTAKLDPGTVICYPKFFKFSVDKRLQPRYKVIEVLKVKNLLKNK--KIAW 365
                 +F           V+  P  F +S++KR+ PR  VI+ L  K L++N+   I+ 
Sbjct: 333 TVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISC 392

The following BLAST results are available for this feature:

BLAST of CsGy5G020170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IHL3	3.6e-11	21.00	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FK23	5.2e-10	19.78	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	1.2e-06	21.74	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	1.5e-04	31.78	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy5G020170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741758.1	3.31e-265	100.00	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >K...	[more]
KAE8648666.1	9.21e-205	79.62	hypothetical protein Csa_008752 [Cucumis sativus]	[more]
XP_031740903.1	2.78e-199	78.13	transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE864...	[more]
XP_031741756.1	3.30e-196	75.47	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE864...	[more]
XP_011655534.2	4.52e-196	76.06	transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KA...	[more]

BLAST of CsGy5G020170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SW09	9.97e-195	76.27	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CXX8	2.01e-194	76.00	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDE1	2.01e-194	76.00	transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5A7SYC3	6.18e-194	75.53	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SSP1	3.85e-192	75.94	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsGy5G020170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	2.4e-47	32.73	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.4e-39	28.74	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.1e-30	27.40	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	4.0e-26	24.94	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	4.0e-26	24.94	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 155..186 e-value: 380.0 score: 7.2 coord: 191..221 e-value: 56.0 score: 12.6 coord: 292..323 e-value: 7.8 score: 15.5 coord: 119..150 e-value: 7.4 score: 15.5 coord: 225..255 e-value: 170.0 score: 9.9 coord: 260..291 e-value: 460.0 score: 6.5 coord: 83..114 e-value: 7.3E-5 score: 32.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 235..342 e-value: 2.7E-15 score: 56.1 coord: 70..233 e-value: 6.1E-21 score: 74.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 21..365
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 142..354 e-value: 3.6E-39 score: 136.5
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 21..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020170.2	CsGy5G020170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding