CsGy5G020100 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020100
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription termination factor MTERF5
Location	Gy14Chr5: 26272250 .. 26273497 (+)
RNA-Seq Expression	CsGy5G020100
Synteny	CsGy5G020100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCAAAAACGTTTTCTCAACACCATTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCCAAAATTCATGTGGCCTTTCTTCAGGATCTCCTACCTCTGGCGGTCGAAAGCTCCAATTCGATGAACAAAACATCCAGAAGTACGGAGCCGTTATCGGTTTCTTGAAATCACATGCATTCGAGAATCCACAGATCGCCAACTTGGTCTCGAGGCGACCTTCGCTCCTTCAATCCAAAGTATCCACCAATCTGAAGCCAAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTAGCAAACCCTTCAATTCTTCTCTGGAGCTTAGATTCTCATTTGAAACCATCATTTCGTCTCTTAAAGGAAATGGTTGAATCTGATGAACAAGTAACTGCTGCTATTTTTCGTTCTTCGTGGCTTCCAACTTTTAATTTCAAGAGTATTGTAAAACCTAATTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATTTAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCATTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATCTTCATCATCATCTTCTTCCAACTTGAGGCTCTTACATAAATATTTTGGTATATATTTGTTAGAGCTGTTAATGTTGAATTCTGAGTGAGGCCTTTTG

mRNA sequence

ATGTCCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCAAAAACGTTTTCTCAACACCATTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCCAAAATTCATGTGGCCTTTCTTCAGGATCTCCTACCTCTGGCGGTCGAAAGCTCCAATTCGATGAACAAAACATCCAGAAGTACGGAGCCGTTATCGGTTTCTTGAAATCACATGCATTCGAGAATCCACAGATCGCCAACTTGGTCTCGAGGCGACCTTCGCTCCTTCAATCCAAAGTATCCACCAATCTGAAGCCAAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTAGCAAACCCTTCAATTCTTCTCTGGAGCTTAGATTCTCATTTGAAACCATCATTTCGTCTCTTAAAGGAAATGGTTGAATCTGATGAACAAGTAACTGCTGCTATTTTTCGTTCTTCGTGGCTTCCAACTTTTAATTTCAAGAGTATTGTAAAACCTAATTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATTTAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCATTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATCTTCATCATCATCTTCTTCCAACTTGAGGCTCTTACATAAATATTTTGGTATATATTTGTTAGAGCTGTTAATGTTGAATTCTGAGTGAGGCCTTTTG

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCAAAAACGTTTTCTCAACACCATTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCCAAAATTCATGTGGCCTTTCTTCAGGATCTCCTACCTCTGGCGGTCGAAAGCTCCAATTCGATGAACAAAACATCCAGAAGTACGGAGCCGTTATCGGTTTCTTGAAATCACATGCATTCGAGAATCCACAGATCGCCAACTTGGTCTCGAGGCGACCTTCGCTCCTTCAATCCAAAGTATCCACCAATCTGAAGCCAAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTAGCAAACCCTTCAATTCTTCTCTGGAGCTTAGATTCTCATTTGAAACCATCATTTCGTCTCTTAAAGGAAATGGTTGAATCTGATGAACAAGTAACTGCTGCTATTTTTCGTTCTTCGTGGCTTCCAACTTTTAATTTCAAGAGTATTGTAAAACCTAATTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATTTAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCATTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATACATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAG

Protein sequence

MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYRGNVEAEAETKSVV*

Homology

[Close]

BLAST of CsGy5G020100 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-09
Identity = 55/261 (21.07%), Postives = 118/261 (45.21%), Query Frame = 0


Query: 69  IGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPKLILANPSI 128
           + +L S   ++  I  ++ R+P +LQ  V  NLK    FL  +G     + +++ A PS+
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 129 LLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSR 188
             +S+++ L+P+ R L E V                                   G+   
Sbjct: 283 FSYSVENSLRPTIRYLIEEV-----------------------------------GIKET 342

Query: 189 NLAKLIQVQPRVITQKVDRL--IQVVQTVKELGI--EPKARLFIRALRVMSSLSDSTWKK 248
           ++ K++Q+ P+++ Q++D     + +   KELG   +   ++  +  +++    D  +  
Sbjct: 343 DVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLP 402

Query: 249 KINVMKSLGWSEKEILTAFKKEPKYLGCS-EEKMRDVADFCLNTAKLDPETVLSYPALFM 308
           +IN ++S+G    +IL       + L  S E+ ++    + +N    +   +  YP    
Sbjct: 403 RINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLS 448

Query: 309 SALD-KLRPRYK-VIEVLKVK 323
            +LD ++RPR++ ++E+ KV+
Sbjct: 463 LSLDQRIRPRHRFLVELKKVR 448

[Close]

BLAST of CsGy5G020100 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 59/261 (22.61%), Postives = 112/261 (42.91%), Query Frame = 0


Query: 67  AVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEI-GFVGPLLPKLILAN 126
           +++ F +   F++P I  ++ R+   L+   S      +++L  I G     LP ++   
Sbjct: 8   SIMWFFRDKGFDDPSIDKML-RKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 67

Query: 127 PSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGV 186
           P IL   LD  L P    L  +  +  +V +AI +   + + + +  + P      + GV
Sbjct: 68  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 127

Query: 187 PSRNLAKLIQVQPRVITQKVD-RLIQVVQTVKELGIEPK---ARLFIRALRVMSSLSDST 246
           P   L K+I   PR+I+  +D +L  +V  +  LG++      ++ ++   +M    D  
Sbjct: 128 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 187

Query: 247 WKKKINVMK-SLGWSEKEILTAFKKEPKYLGCSEEK-MRDVADFCLNTAKLDPE---TVL 306
            +     +K S+G SE  I +     P+ L     K ++   D+       D +    V 
Sbjct: 188 LRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVT 247

Query: 307 SYP-ALFMSALDKLRPRYKVI 317
            YP  L  S  + L+PR + +
Sbjct: 248 GYPQILIKSVKNSLQPRIRFL 267

[Close]

BLAST of CsGy5G020100 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 43/156 (27.56%), Postives = 73/156 (46.79%), Query Frame = 0


Query: 34  IQFLQNSCGLSSGS-PTSGGR--KLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRP 93
           ++FL N   +S    P S  R  +L     + Q   A + FLK+  F       + SR  
Sbjct: 105 LRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPA-LTFLKTLGFVGRD--TITSRNT 164

Query: 94  SLLQSKVSTNLKPKFEFLQE-IGFVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVE 153
            LL S V   L PK E+L+E +GF    + K+++ +P++L +S+D++L P      E + 
Sbjct: 165 VLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMR 224

Query: 154 SDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGV 186
            D      + R     +F+ +  +KP   +L   G+
Sbjct: 225 GD---VKELKRFPQYFSFSLERKIKPRHRLLKEHGI 254

[Close]

BLAST of CsGy5G020100 vs. NCBI nr
Match: XP_031741173.1 (uncharacterized protein LOC101219984 [Cucumis sativus] >KAE8648634.1 hypothetical protein Csa_007862 [Cucumis sativus])

HSP 1 Score: 716 bits (1848), Expect = 9.39e-260
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ
Sbjct: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL
Sbjct: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS
Sbjct: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
           TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300

Query: 301 LFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIY 360
           LFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIY
Sbjct: 301 LFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIY 360

Query: 361 RGNVEAEAETKSVV 374
           RGNVEAEAETKSVV
Sbjct: 361 RGNVEAEAETKSVV 374

[Close]

BLAST of CsGy5G020100 vs. NCBI nr
Match: XP_011655506.2 (transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus] >KAE8648626.1 hypothetical protein Csa_008456 [Cucumis sativus])

HSP 1 Score: 567 bits (1461), Expect = 8.03e-201
Identity = 301/375 (80.27%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISS+F LHFI KRFLNTISTSTLP PSVSTIQFLQNSC LSSGSPTS GRKLQFDE+
Sbjct: 1   MSKISSSFFLHFIHKRFLNTISTSTLPSPSVSTIQFLQNSCALSSGSPTSTGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           ++Q+Y A+IGF KSH FEN QIA LVSR+P +L  KV  NLKPK EFLQEIGF+GPLLPK
Sbjct: 61  HLQQYEAIIGFFKSHGFENSQIAKLVSRKPQILHCKVPNNLKPKVEFLQEIGFIGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LI+ NPSILL SLDSHLKPSF L+KEM+ESDEQVTAAI RSSWL TF+ K I+KPN DVL
Sbjct: 121 LIITNPSILLCSLDSHLKPSFCLIKEMLESDEQVTAAICRSSWLLTFDSKGIIKPNCDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEGVPSRN+AKLIQVQPR + QKVDR IQVVQTVKELGIEPKARLFI ALRV SSLSDS
Sbjct: 181 VSEGVPSRNIAKLIQVQPRAVMQKVDRFIQVVQTVKELGIEPKARLFIHALRVRSSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
            WKKKINV+KSLG SEKEILTAFKKEPKYL CSEEK+RDVADFC NTAKLDPETV+SYP 
Sbjct: 241 NWKKKINVLKSLGLSEKEILTAFKKEPKYLACSEEKIRDVADFCFNTAKLDPETVISYPT 300

Query: 301 LFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLER-EREFVEKYIVKHLDEIPNLMDI 360
           +FMSALDKLR RYKV+E LKVK+LLKN KI    L R ER+F+E Y+VKHLD+IPNLMDI
Sbjct: 301 IFMSALDKLRQRYKVLEALKVKSLLKNVKILPRALVRAERDFMEMYVVKHLDKIPNLMDI 360

Query: 361 YRGNVEAEAETKSVV 374
           YRGNV AE  TKSV+
Sbjct: 361 YRGNVAAE--TKSVL 373

[Close]

BLAST of CsGy5G020100 vs. NCBI nr
Match: XP_031741758.1 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >KAE8648638.1 hypothetical protein Csa_008093 [Cucumis sativus])

HSP 1 Score: 541 bits (1395), Expect = 9.55e-191
Identity = 285/375 (76.00%), Postives = 322/375 (85.87%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISSTFLLHFI KRFLNTISTS LP PSVSTIQFL NSC LSS SPTS GRKLQFDE+
Sbjct: 1   MSKISSTFLLHFIHKRFLNTISTSALPSPSVSTIQFLTNSCSLSSESPTSKGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQ+Y A+IGF KS+ FENPQIANLVSRRPS+LQS+VSTNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYEAIIGFFKSYGFENPQIANLVSRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LIL +P+IL+ SL+  LKPSF  +KEM+E DE+VTAAI RS  L T N+K  ++   DVL
Sbjct: 121 LILKSPTILVTSLEFQLKPSFFFIKEMLEPDEKVTAAICRSPKLITSNYKGELESIVDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEGVPS+N+A++I  +P  I  KVDR+I VV+ VKELG EPKAR+F+ A+    S+SDS
Sbjct: 181 VSEGVPSKNIARMIAYKPATIMHKVDRMIDVVKRVKELGFEPKARMFVYAVLARISMSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
           TWK+KINV+KSLGWSEKEILTAFKK+P YL CSE+KMRDVADFC NTAKLDP TV+ YP 
Sbjct: 241 TWKRKINVLKSLGWSEKEILTAFKKDPNYLSCSEDKMRDVADFCFNTAKLDPGTVICYPK 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            F  ++DK L+PRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI
Sbjct: 301 FFKFSVDKRLQPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360

Query: 361 YRGNVEAEAETKSVV 374
           Y+GNVE EAETKSVV
Sbjct: 361 YKGNVETEAETKSVV 375

[Close]

BLAST of CsGy5G020100 vs. NCBI nr
Match: KAA0034112.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15809.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 540 bits (1390), Expect = 5.12e-190
Identity = 284/374 (75.94%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MS++SS+FLLHFIQ RFLNTI TSTLP  SVSTIQFL+NSCGLSS SP S  RKLQFDE+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQKY A IGFLKSH F+N QIA LVS+ PS+LQSKVSTNLKPKFEFLQEIG VGPLLPK
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LI +NP ILL SLDSHLKPSF  LKE++ESD QVTAAI RS+ L TF+FK I+KPN DVL
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEG+PSRN+AK+I +QP  I Q+VDR+IQ V+TVKELG+EPKAR+F+ A+ +  SLSDS
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
            W  KINV+KSLGWSEKEI  AFKK+P YLGCSE+KMRDVADFC NTAKLDP TV+SYP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            F S++DK LRPRYKV+EVLKVKNLLKNKKIA +LL+ E+ FVEKY+VKHLDEIPNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNVEAEAETKSV 373
           YRGNVEAE  TKSV
Sbjct: 361 YRGNVEAE--TKSV 372

[Close]

BLAST of CsGy5G020100 vs. NCBI nr
Match: XP_031741756.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE8648637.1 hypothetical protein Csa_008513 [Cucumis sativus])

HSP 1 Score: 538 bits (1385), Expect = 3.17e-189
Identity = 281/375 (74.93%), Postives = 319/375 (85.07%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKI STFLLHFI KRFLN ISTSTLPLPSVSTIQFL NSC LSS SPTS GRKLQFDE+
Sbjct: 1   MSKIPSTFLLHFIHKRFLNAISTSTLPLPSVSTIQFLTNSCALSSESPTSKGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQ+Y A IGFLKSH FEN QIA LVSR+P +LQ KV  NL+PKFEFLQEIGF+GPLLPK
Sbjct: 61  HIQQYEATIGFLKSHGFENSQIAKLVSRKPQILQCKVPNNLQPKFEFLQEIGFIGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LI +NP ILL SLDSHLKPSF  LKE++ SDEQVT AI RS+ L TF+FK I+KPN D L
Sbjct: 121 LIASNPFILLRSLDSHLKPSFFFLKEILGSDEQVTVAISRSTRLLTFDFKGILKPNVDFL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEGVPSRN+AKL  +QP  + +KVDR+I  V+ VKE+G EPKAR+F+ A+    SLSDS
Sbjct: 181 VSEGVPSRNIAKLFALQPLALMKKVDRMINAVKVVKEIGFEPKARMFVYAVLTRLSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
            WKKKI+++KSLGWSE EI TAFKK P ++GCSEEKMRDVADFCLNT+KLDP T+++YP 
Sbjct: 241 NWKKKIDILKSLGWSENEIFTAFKKYPLFIGCSEEKMRDVADFCLNTSKLDPGTLITYPV 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            F S++DK LRPRYKVIEVLKVKNLLKNKKIA L ++ EREFVEKY+VKHL+EIPNLMDI
Sbjct: 301 FFKSSVDKKLRPRYKVIEVLKVKNLLKNKKIASLFVKGEREFVEKYVVKHLNEIPNLMDI 360

Query: 361 YRGNVEAEAETKSVV 374
           YRGNVEAEAETKSVV
Sbjct: 361 YRGNVEAEAETKSVV 375

[Close]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL
Match: A0A5A7SSP1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003130 PE=3 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 2.48e-190
Identity = 284/374 (75.94%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MS++SS+FLLHFIQ RFLNTI TSTLP  SVSTIQFL+NSCGLSS SP S  RKLQFDE+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQKY A IGFLKSH F+N QIA LVS+ PS+LQSKVSTNLKPKFEFLQEIG VGPLLPK
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LI +NP ILL SLDSHLKPSF  LKE++ESD QVTAAI RS+ L TF+FK I+KPN DVL
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEG+PSRN+AK+I +QP  I Q+VDR+IQ V+TVKELG+EPKAR+F+ A+ +  SLSDS
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
            W  KINV+KSLGWSEKEI  AFKK+P YLGCSE+KMRDVADFC NTAKLDP TV+SYP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
            F S++DK LRPRYKV+EVLKVKNLLKNKKIA +LL+ E+ FVEKY+VKHLDEIPNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNVEAEAETKSV 373
           YRGNVEAE  TKSV
Sbjct: 361 YRGNVEAE--TKSV 372

[Close]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL
Match: A0A5A7SXE1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001220 PE=3 SV=1)

HSP 1 Score: 535 bits (1378), Expect = 1.66e-188
Identity = 280/375 (74.67%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISS+FLLHF   RFLNTI TSTLPL SVSTIQFL NSCGLSSGSPTS GRKLQF E+
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           N Q+YGAVI FLKSH FENPQIA LVSR+PS+LQS+VS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LI+++PSIL  SLDS LKPSFRLLKEM+ SDE+VTAAI R+SWL T++FK ++K NFDVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
           VSEGVPSRN+AK+I   PR I Q+VD++IQVV+ VKELGIEPKA +F+ ALRV  S+S+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
            WK+KINVMKSLGWSE+EILTAFK+ P YL CSEEKMRDVADFC NTAKLDP T++SYP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           LF  + DK ++PRYKV+EVLKVK+LL+N KIA +L + EREFV+ Y+VK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVEAEAETKSVV 374
           YRGN+ AE  TKSV+
Sbjct: 361 YRGNIAAE--TKSVL 373

[Close]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 535 bits (1378), Expect = 1.72e-188
Identity = 282/376 (75.00%), Postives = 320/376 (85.11%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISS+FLLHF   RFLNT+STSTLPLPSVSTIQFL NSCGLSSGSPTS GRKLQFDE+
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQ+YGAVI FLKSH FEN QIANLVS+RPS+LQSKVSTNLKP+FEF QEIGF+GPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LIL+ P +L  SLDS LKPSF  LK+++ESDEQVTAAI R   L   + K  +K N DVL
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
            SEGVPSRN+AK+I++ PR + QKVDR+IQVV+ VKELGIEPK R F+ A+R+  SLSDS
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
           TWKKKINVMKSLGWSE EILTAFKK+P YL CSEEK+RDV DFCLNTAKLDPETV+SYP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNK-KIAWLLLEREREFVEKYIVKHLDEIPNLMD 360
           LFMSALDK LRPR+K++E LKVK+LLKN  KI   L+  EREFVE+Y+VKHLD+IPNLMD
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNVEAEAETKSVV 374
           IYRGNV  E  TKSV+
Sbjct: 361 IYRGNVATE--TKSVL 374

[Close]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 535 bits (1378), Expect = 1.72e-188
Identity = 282/376 (75.00%), Postives = 320/376 (85.11%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           MSKISS+FLLHF   RFLNT+STSTLPLPSVSTIQFL NSCGLSSGSPTS GRKLQFDE+
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           +IQ+YGAVI FLKSH FEN QIANLVS+RPS+LQSKVSTNLKP+FEF QEIGF+GPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LIL+ P +L  SLDS LKPSF  LK+++ESDEQVTAAI R   L   + K  +K N DVL
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
            SEGVPSRN+AK+I++ PR + QKVDR+IQVV+ VKELGIEPK R F+ A+R+  SLSDS
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
           TWKKKINVMKSLGWSE EILTAFKK+P YL CSEEK+RDV DFCLNTAKLDPETV+SYP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNK-KIAWLLLEREREFVEKYIVKHLDEIPNLMD 360
           LFMSALDK LRPR+K++E LKVK+LLKN  KI   L+  EREFVE+Y+VKHLD+IPNLMD
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNVEAEAETKSVV 374
           IYRGNV  E  TKSV+
Sbjct: 361 IYRGNVATE--TKSVL 374

[Close]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 533 bits (1374), Expect = 6.74e-188
Identity = 280/375 (74.67%), Postives = 319/375 (85.07%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60
           M K SSTFLLHFIQKRFLNT+STSTLPL SVST++FL NSCGLSSGSPTS GRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120
           NIQ+Y AVIGFLKSH  ENPQIA LVSR+P +LQSKVSTNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180
           LIL+NP I   +LDS LKPSF  LKE++ESDEQVTAAI  S WL   +FK I+K N DVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240
            SEGVPSRN+AKLI    R I +KVDR+I+VV+TVKELGIEPKA +F+ ALR+  S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPA 300
           TWKKKINVMKSLGWSE EI TAFKK+P +LGCSEEKMRDVADFC NTAKLDP +V+  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 LFMSALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDI 360
           +F  ++DK L+PRYKV+EVLKVKNLLKN  IAW+L++ ER FV+K++V+HLDEIPNLMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVEAEAETKSVV 374
           YRGNV AE  TKSV+
Sbjct: 361 YRGNVTAE--TKSVL 373

[Close]

BLAST of CsGy5G020100 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-46
Identity = 113/361 (31.30%), Postives = 189/361 (52.35%), Query Frame = 0


Query: 13  IQKRFLNTISTSTLPLPSVS--------TIQFLQNSCGLSSGSPTSGGRKLQFDEQNIQK 72
           +Q +F + ++T T   P           T+ +L +SCGLS  S T   RKL  D    ++
Sbjct: 43  LQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSP--ER 102

Query: 73  YGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPKLILA 132
              V+  L+ H F   QI++LV +RP LL +   + L PK  F   IG    LL + + +
Sbjct: 103 PNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLAS 162

Query: 133 NPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEG 192
           +P+IL  SL + L PS+  LK +++SDE++ AA+ R++W+   +    + PN + +   G
Sbjct: 163 DPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETG 222

Query: 193 VPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSD-STWK 252
           VP + +  L+   P  + QK      + +  +E+G  P+   F+ A+  +S   + S W 
Sbjct: 223 VPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWD 282

Query: 253 KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYP-ALF 312
           K   V +  GWSE +I+ AFKK P  +  SE K+    ++ +N   + P ++   P  LF
Sbjct: 283 KCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLF 342

Query: 313 MSALDKLRPRYKVIEVLKVKNLLKNK-KIAWLLLEREREFVEKYIVKHLDEIPNLMDIYR 363
            S   ++ PR  V +VL    L+K    +  LL+  E+ F+EK ++K+ +E+P LM++Y 
Sbjct: 343 FSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYL 401

[Close]

BLAST of CsGy5G020100 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.4e-32
Identity = 91/302 (30.13%), Postives = 158/302 (52.32%), Query Frame = 0


Query: 60  QNIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLP 119
           +++++  +VI  LKS++F + QI   +   P ++   V   L+PK  F ++IGF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KLILANPSILLWSLDSHLKPSFRLLKEMV-ESDEQVTAAIFRSSWLPTFNFKSI-VKPNF 179
           K +  N S++  SL   L P+  +LK +V    E +   + R  WL      ++ + PN 
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSL 239
             L + G+    LA L++ QPR+     ++L   V    +LG    +R+ + A+  +SSL
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 SDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLS 299
           S+ T+ +K+ +  + G+SE EI    ++ P  + CSE+K+    +F L    L+ E +  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPALFMSALDK-LRPRYKVIEVLKVKNLL-----KNKKIAWLLLEREREFVEKYIVKHLD 354
            P +    L+K + PR KV+++L+ K LL     K K +  ++   E  F+EKY+V+  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]

BLAST of CsGy5G020100 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-25
Identity = 94/371 (25.34%), Postives = 179/371 (48.25%), Query Frame = 0


Query: 33  TIQFLQNSCGLSSGSPTSGGRKLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRPSL 92
           T+ +L +S GL++    S  RK+ F+++N     +V+  L SH F   QI+ ++   P L
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSTNLKPKFEFLQEIGFVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVESDE 152
           L +    +L PK +FLQ  G     + +++ + P IL       +   +  +K+ +    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVV 212
                +  S  LP  N ++ ++ N  VL   G+P + L  L+    + +  K ++  + +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 QTVKELGIEPKARLFIRALRVMSSLSDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGC 272
           + V E+G +P    F+ AL+V+  +++ T ++K+++ KSLG+   ++ ++FKK P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCLNTAKLDPETVLS 332
           SE+KM D                                     +F +       + V+S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPALFMSALDK-LRPRYKVIEVLKVKNLLKNK--KIAWLLLEREREFVEKYIVKHLDE-- 364
            PA+F  +L+K + PR  VI+ L  K L++N+   I+ +L+  ++ F+ +Y+  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of CsGy5G020100 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-25
Identity = 94/371 (25.34%), Postives = 179/371 (48.25%), Query Frame = 0


Query: 33  TIQFLQNSCGLSSGSPTSGGRKLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRPSL 92
           T+ +L +S GL++    S  RK+ F+++N     +V+  L SH F   QI+ ++   P L
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSTNLKPKFEFLQEIGFVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVESDE 152
           L +    +L PK +FLQ  G     + +++ + P IL       +   +  +K+ +    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVV 212
                +  S  LP  N ++ ++ N  VL   G+P + L  L+    + +  K ++  + +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 QTVKELGIEPKARLFIRALRVMSSLSDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGC 272
           + V E+G +P    F+ AL+V+  +++ T ++K+++ KSLG+   ++ ++FKK P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCLNTAKLDPETVLS 332
           SE+KM D                                     +F +       + V+S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPALFMSALDK-LRPRYKVIEVLKVKNLLKNK--KIAWLLLEREREFVEKYIVKHLDE-- 364
            PA+F  +L+K + PR  VI+ L  K L++N+   I+ +L+  ++ F+ +Y+  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of CsGy5G020100 vs. TAIR 10
Match: AT1G62085.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-20
Identity = 72/245 (29.39%), Postives = 124/245 (50.61%), Query Frame = 0


Query: 33  TIQFLQNSCGLSSGSPTSGGRKLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRPSL 92
           ++ +L +S GL      S  +K+ F+++      +V+  L+SH F + QI+++++  P L
Sbjct: 57  SVSYLVDSLGLPKKVAESISKKVSFEDKG--NPDSVLSLLRSHGFTDSQISSIITDYPQL 116

Query: 93  LQSKVSTNLKPKFEFLQEIGFVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVESDE 152
           L +    ++ PK +FLQ  G     L  ++   P IL    D  +   +  +KE++E+D+
Sbjct: 117 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 176

Query: 153 QVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVV 212
                    S LP  + +     N  VL   GVP R L  L+    + +  K +   + +
Sbjct: 177 SSKFEKLCHS-LPEGSKQENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGK-ENFEESL 236

Query: 213 QTVKELGIEPKARLFIRALRVMSSLSDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGC 272
           + V E+G +P    F++ALRV+    D T + K+NV KSLG+S  ++   FKK P +L  
Sbjct: 237 KKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNF 296

Query: 273 SEEKM 278
           SE K+
Sbjct: 297 SENKI 297

The following BLAST results are available for this feature:

BLAST of CsGy5G020100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	3.3e-09	21.07	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.7e-05	22.61	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q84X53	1.1e-04	27.56	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy5G020100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741173.1	9.39e-260	100.00	uncharacterized protein LOC101219984 [Cucumis sativus] >KAE8648634.1 hypothetica...	[more]
XP_011655506.2	8.03e-201	80.27	transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus] >K...	[more]
XP_031741758.1	9.55e-191	76.00	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >K...	[more]
KAA0034112.1	5.12e-190	75.94	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15809.1 t...	[more]
XP_031741756.1	3.17e-189	74.93	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE864...	[more]

BLAST of CsGy5G020100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSP1	2.48e-190	75.94	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SXE1	1.66e-188	74.67	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWR8	1.72e-188	75.00	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEP9	1.72e-188	75.00	uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=...	[more]
A0A5D3CWA2	6.74e-188	74.67	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsGy5G020100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.6e-46	31.30	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	6.4e-32	30.13	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	3.4e-25	25.34	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	3.4e-25	25.34	Mitochondrial transcription termination factor family protein	[more]
AT1G62085.1	1.1e-20	29.39	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 155..186 e-value: 600.0 score: 5.6 coord: 292..322 e-value: 100.0 score: 11.5 coord: 191..221 e-value: 0.62 score: 19.1 coord: 83..114 e-value: 2.0E-4 score: 30.7 coord: 225..255 e-value: 130.0 score: 10.8 coord: 119..150 e-value: 20.0 score: 14.1 coord: 260..291 e-value: 30.0 score: 13.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 70..221 e-value: 5.1E-18 score: 65.1 coord: 236..341 e-value: 8.7E-14 score: 51.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..364
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 131..353 e-value: 1.0E-41 score: 144.8
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 11..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020100.1	CsGy5G020100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding