CsGy5G020070 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	GDSL esterase/lipase
Location	Gy14Chr5: 26250510 .. 26251973 (-)
RNA-Seq Expression	CsGy5G020070
Synteny	CsGy5G020070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAAACATTCTTAAGGTTTTATGTTTTATATGGTTGAATGTGTCATACTGACGATTTCATGTCATTCGCATGGAAATTTTAAAATTGTTGTATTTTAAAAATTCGGAGACAAAATGAGTTAATTTTTATATAATCGTAGGGTCCAAAAACATAAGTTTTTAAAAGTCTGATAGCTAACAGACATATTTTATAAAACTTGAGGGAGTAAAGATGGGTAATTTTGCACCTTCTTTTTGGCTAACAATTTGTGTGTATAAATTACAATGTTTTATAGGGACATTTAAACATTTAACATTAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGGTATTCTTTCTTTCTTGATTCTTTCCGTTCTTCTTTCTGGATATCTTATGATTTCTTTAAACTTCCTTTACGTTTGATTCCTTGTTTTTGTTTCTGGGTGTTCTTCTCAGCCCTACGTCTTGGACTTCCGTTTGTTCTGAGTTATCTTGGGCACGTTGGAGCAGTGGAAGATATGATTCAAGGAGTGAATTACGCATCGGCTAGTGCTGGAATTATCCAATTCAGTCCTTTACATATCAATTGGAATTAACGATTACATTCATTACTATCTTTTTAATATATCCAATGTTCAAAATCTTTACCCTCCATGGAATTTTAACCAATTTCTTGCAGCCACAATCAGACAGGAAATCAAGGTGATTTTATTGTTTATAGTTTTTGCTATGCTACATAATGGAAAAAAGTATATGCATACATTACCCATTATGCAATCTCTTTGCCTTCGGGATATTGTTGTTTTGCACATATTTTCATTTTCCAAAGTTTGAGCTTTTGGATTATTTTAGATATTGGAAACTAACCATGCATTATATTGTAAGCCCTGCATAGAAGTTTCGTTTATTTCCACTGTACTAATTTACCAATTGTTCAAGTACTTCCTAAAAGGCTTTGTGTTGATGGTCCAGAATTTGTATTACATGAATGCTAGGAGAACCGTTGTAATGGGATTGGCACCTATTGGTTGTGCTCCTTTCTACCTATGACAGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG

mRNA sequence

ATGAGGCAAACATTCTTAAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG

Coding sequence (CDS)

ATGAGGCAAACATTCTTAAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG

Protein sequence

MRQTFLRLEIRRKKFEEGVEAVIDFPAFFNHNHFLRFSSINSTSSQSFASNSLVPALFVIHDSGPIIFPTVEISTPVLPLEGSVMEEFPSIFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHICVLQGSMD*

Homology

[Close]

BLAST of CsGy5G020070 vs. NCBI nr
Match: KAE8648631.1 (hypothetical protein Csa_009148 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 8.61e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MRQTFLRLEIRRKKFEEGVEAVIDFPAFFNHNHFLRFSSINSTSSQSFASNSLVPALFVI 60
           MRQTFLRLEIRRKKFEEGVEAVIDFPAFFNHNHFLRFSSINSTSSQSFASNSLVPALFVI
Sbjct: 1   MRQTFLRLEIRRKKFEEGVEAVIDFPAFFNHNHFLRFSSINSTSSQSFASNSLVPALFVI 60

Query: 61  HDSGPIIFPTVEISTPVLPLEGSVMEEFPSIFLYRDENAACTEDINDMVIEFNFSMRYTV 120
           HDSGPIIFPTVEISTPVLPLEGSVMEEFPSIFLYRDENAACTEDINDMVIEFNFSMRYTV
Sbjct: 61  HDSGPIIFPTVEISTPVLPLEGSVMEEFPSIFLYRDENAACTEDINDMVIEFNFSMRYTV 120

Query: 121 KELGTELHHSSIILCDLLRVSMDILKDHICVLQGSMD 157
           KELGTELHHSSIILCDLLRVSMDILKDHICVLQGSMD
Sbjct: 121 KELGTELHHSSIILCDLLRVSMDILKDHICVLQGSMD 157

[Close]

BLAST of CsGy5G020070 vs. NCBI nr
Match: KGN53427.2 (hypothetical protein Csa_014736 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 7.12e-20
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHIC 150
           ++ Y  ENAACTE+INDMVI+FNF MRY V+EL  EL  S+II  DLLR  MDILK+HIC
Sbjct: 112 LWQYLGENAACTEEINDMVIKFNFFMRYMVEELSMELPDSNIIFSDLLRGLMDILKNHIC 171

Query: 151 VLQGSMD 157
            LQGSMD
Sbjct: 172 ALQGSMD 178

[Close]

BLAST of CsGy5G020070 vs. NCBI nr
Match: XP_008452220.1 (PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK00787.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 2.00e-15
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ YR EN AC E+INDMV+EFNF+MRY V+ELG EL  SSII CDLL  SMDILK+H
Sbjct: 269 LWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNH 326

[Close]

BLAST of CsGy5G020070 vs. NCBI nr
Match: XP_004145656.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protein Csa_010616 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 2.72e-15
Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ YR EN AC E+INDMV+EFNF+MRY V+ELG EL  S+II CDLL+ SMDILK+H
Sbjct: 267 LWQYRSENGACIEEINDMVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNH 324

[Close]

BLAST of CsGy5G020070 vs. NCBI nr
Match: KAA0044894.1 (GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 4.64e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ Y  EN  C E+INDMV+EFNF+MRY V+EL TEL  SSIILCDLL+ SM+ILK++
Sbjct: 13  LWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQYSMNILKNN 70

[Close]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL
Match: A0A0A0KPS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582210 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 2.69e-37
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 93  LYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHICVL 152
           +YRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHICVL
Sbjct: 55  VYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHICVL 114

Query: 153 QGSMD 157
           QGSMD
Sbjct: 115 QGSMD 119

[Close]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL
Match: A0A0A0KZW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052660 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.89e-20
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHIC 150
           ++ Y  ENAACTE+INDMVI+FNF MRY V+EL  EL  S+II  DLLR  MDILK+HIC
Sbjct: 87  LWQYLGENAACTEEINDMVIKFNFFMRYMVEELSMELPDSNIIFSDLLRGLMDILKNHIC 146

Query: 151 VLQGSMD 157
            LQGSMD
Sbjct: 147 ALQGSMD 153

[Close]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.68e-16
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ YR EN AC E+INDMV+EFNF+MRY V+ELG EL  SSII CDLL  SMDILK+H
Sbjct: 269 LWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNH 326

[Close]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL
Match: A0A1S3BSQ9 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.68e-16
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ YR EN AC E+INDMV+EFNF+MRY V+ELG EL  SSII CDLL  SMDILK+H
Sbjct: 269 LWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNH 326

[Close]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.32e-15
Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 91  IFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 148
           ++ YR EN AC E+INDMV+EFNF+MRY V+ELG EL  S+II CDLL+ SMDILK+H
Sbjct: 267 LWQYRSENGACIEEINDMVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNH 324

[Close]

BLAST of CsGy5G020070 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 94  YRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDH 149
           YR +N  C E++N M++E NF MRYTV +L  EL  +SII CD+ + +MDIL++H
Sbjct: 269 YRSQNGECAEEVNSMIMESNFVMRYTVDKLNRELPGASIIYCDVFQSAMDILRNH 323

The following BLAST results are available for this feature:

BLAST of CsGy5G020070 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G020070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648631.1	8.61e-107	100.00	hypothetical protein Csa_009148 [Cucumis sativus]	[more]
KGN53427.2	7.12e-20	68.66	hypothetical protein Csa_014736 [Cucumis sativus]	[more]
XP_008452220.1	2.00e-15	68.97	PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL...	[more]
XP_004145656.2	2.72e-15	67.24	GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protei...	[more]
KAA0044894.1	4.64e-15	63.79	GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase...	[more]

BLAST of CsGy5G020070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPS9	2.69e-37	98.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582210 PE=4 SV=1	[more]
A0A0A0KZW0	1.89e-20	68.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052660 PE=3 SV=1	[more]
A0A5A7UZU1	9.68e-16	68.97	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]
A0A1S3BSQ9	9.68e-16	68.97	GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3...	[more]
A0A0A0L7F0	1.32e-15	67.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1	[more]

BLAST of CsGy5G020070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10950.1	3.4e-11	50.91	SGNH hydrolase-type esterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45648:SF13	OS02G0290900 PROTEIN	coord: 92..148
None	No IPR available	PANTHER	PTHR45648	GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)	coord: 92..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020070.2	CsGy5G020070.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0097502	mannosylation
biological_process	GO:0009833	plant-type primary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0051753	mannan synthase activity