CsGy5G020000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G020000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ferredoxin-thioredoxin reductase, variable chain
Location	Gy14Chr5: 26205318 .. 26206406 (-)
RNA-Seq Expression	CsGy5G020000
Synteny	CsGy5G020000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAAACAATTTTAAAAACTCTCAAACTAATATTCATTTCCTTCTTCGGCGAAACACTCCTTCCGCGGCACAGAAATGATTAGTATTGCGAACAGTATCGGCGTGATACCATCACCGGCTCCGTCGTCGGCGTCGATGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTGCTGATGTTAAATCTTCCTTTTCCTCATCCGTTTGTTCTCTATCGTCACTTGTTGTTAATCCTTTCAACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCTGGAACTTCGTCTTCAGCTACTGCTGTTTCTGCGGCGACTACGTCATTGTCGGAGGAAGAGACTGATGAAGCGGCTGCCGCTAGGATTGGAGCTAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCAAATCTTGAGGGAATGGAAGGAGTGGTGAAGGATTATGTACGTGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCTGTCAAATTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAATCAGGCTTGTTATTCATCATCCTCTTCATTCTAATGAATCATCAAGCCAAGACAATTGTTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTGTCAACCTTTTAAGGTTTGATCTTCTTCTATATTTCTATCTACACCATTTACTCTTTGCCTTTGTAATGTAGAAAAATTGCTCGAGTGTTTTTCTCCTGAGCTAGTTAACTTTCTCGATTCTCGATGTGGCTTTGTAAAATAATTGCGCCAAGACAAGAGGAAATTTAGTCATCTAATACATGTCTGATCCAAATGGTTTCAAAATCGGTTACTCTTGTATGGATGTTGTTTCAACAACTTATTGTGCTTCATCTTTTACTTGGAGGGAGGATGGGGATTTGAAGTGGTTGGGCTTTCCTTCCATTGTCAAGATGAATGCTTACTTGTTTCTTGTTAATCCCTCCAGTTTATATTGAG

mRNA sequence

GAGGAAACAATTTTAAAAACTCTCAAACTAATATTCATTTCCTTCTTCGGCGAAACACTCCTTCCGCGGCACAGAAATGATTAGTATTGCGAACAGTATCGGCGTGATACCATCACCGGCTCCGTCGTCGGCGTCGATGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTGCTGATGTTAAATCTTCCTTTTCCTCATCCGTTTGTTCTCTATCGTCACTTGTTGTTAATCCTTTCAACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCTGGAACTTCGTCTTCAGCTACTGCTGTTTCTGCGGCGACTACGTCATTGTCGGAGGAAGAGACTGATGAAGCGGCTGCCGCTAGGATTGGAGCTAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCAAATCTTGAGGGAATGGAAGGAGTGGTGAAGGATTATGTACGTGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCTGTCAAATTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAATCAGGCTTGTTATTCATCATCCTCTTCATTCTAATGAATCATCAAGCCAAGACAATTGTTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTGTCAACCTTTTAAGGTTTGATCTTCTTCTATATTTCTATCTACACCATTTACTCTTTGCCTTTGTAATGTAGAAAAATTGCTCGAGTGTTTTTCTCCTGAGCTAGTTAACTTTCTCGATTCTCGATGTGGCTTTGTAAAATAATTGCGCCAAGACAAGAGGAAATTTAGTCATCTAATACATGTCTGATCCAAATGGTTTCAAAATCGGTTACTCTTGTATGGATGTTGTTTCAACAACTTATTGTGCTTCATCTTTTACTTGGAGGGAGGATGGGGATTTGAAGTGGTTGGGCTTTCCTTCCATTGTCAAGATGAATGCTTACTTGTTTCTTGTTAATCCCTCCAGTTTATATTGAG

Coding sequence (CDS)

ATGATTAGTATTGCGAACAGTATCGGCGTGATACCATCACCGGCTCCGTCGTCGGCGTCGATGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTGCTGATGTTAAATCTTCCTTTTCCTCATCCGTTTGTTCTCTATCGTCACTTGTTGTTAATCCTTTCAACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCTGGAACTTCGTCTTCAGCTACTGCTGTTTCTGCGGCGACTACGTCATTGTCGGAGGAAGAGACTGATGAAGCGGCTGCCGCTAGGATTGGAGCTAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCAAATCTTGAGGGAATGGAAGGAGTGGTGAAGGATTATGTACGTGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCTGTCAAATTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAA

Protein sequence

MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV*

Homology

[Close]

BLAST of CsGy5G020000 vs. ExPASy Swiss-Prot
Match: P80680 (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.1e-25
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 88  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRV 147
           A+  ++ EE   AAA +IG RVRV  PL+VYHV K PD +++GMEGVVK YV VWKGKRV
Sbjct: 3   ASDDVAAEEA--AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRV 62

Query: 148 SANLPYKVEFVVPVEGRP-PVKFVAHLKEEEFEYV 182
           +AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Sbjct: 63  TANFPFKVEFELAVEGQPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of CsGy5G020000 vs. ExPASy Swiss-Prot
Match: P38365 (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-17
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 9   GVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGR-RLF 68
           GV    + ++AS A   A +         +++ S++VC  S+L       +  R R  + 
Sbjct: 4   GVAVMSSATAASTATATAAATARIPLFLSRNNSSATVC--STLRCRTITRTRTRARLAIC 63

Query: 69  SEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDAN 128
            EV ++SDS T       S++++   E+E  +    ++G +V+VK PLKVYHV KLP+  
Sbjct: 64  CEVALKSDSSTGFD----SSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVE 123

Query: 129 L-EGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 182
           L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK V HLKEEEFE +
Sbjct: 124 LTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 172

[Close]

BLAST of CsGy5G020000 vs. NCBI nr
Match: XP_004147092.1 (ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 hypothetical protein Csa_008440 [Cucumis sativus])

HSP 1 Score: 333 bits (854), Expect = 1.08e-114
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of CsGy5G020000 vs. NCBI nr
Match: XP_038893043.1 (ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida])

HSP 1 Score: 316 bits (810), Expect = 5.48e-108
Identity = 171/181 (94.48%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MISIANSIGVIP+PAPSSAS AAR ACSMTVFS ADVKSS+SSSVCSLSS+VVNPFNCSI
Sbjct: 1   MISIANSIGVIPTPAPSSASAAARSACSMTVFSCADVKSSYSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTS SATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSPSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of CsGy5G020000 vs. NCBI nr
Match: XP_008445916.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo])

HSP 1 Score: 315 bits (806), Expect = 2.23e-107
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

[Close]

BLAST of CsGy5G020000 vs. NCBI nr
Match: KAA0034101.1 (sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 2.85e-98
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

[Close]

BLAST of CsGy5G020000 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285 bits (728), Expect = 1.50e-95
Identity = 156/181 (86.19%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

[Close]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL
Match: A0A0A0KV36 (FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 5.21e-115
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL
Match: A0A1S3BEI2 (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.08e-107
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

[Close]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL
Match: A0A5D3D039 (Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003240 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.38e-98
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

[Close]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL
Match: A0A6J1H0Z6 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458936 PE=4 SV=1)

HSP 1 Score: 282 bits (722), Expect = 5.94e-95
Identity = 155/181 (85.64%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEAAAARIGARVRVKVPLKVYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

[Close]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL
Match: A0A6J1KDF2 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493885 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 4.87e-94
Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+SSSV SLSS+VVNPFNCSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT SSA AVSAA TSLSE+ETDEAAAARIGARVRVKVPL VYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHV 120

Query: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

[Close]

BLAST of CsGy5G020000 vs. TAIR 10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 )

HSP 1 Score: 128.3 bits (321), Expect = 6.5e-30
Identity = 76/154 (49.35%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 28  SMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSA 87
           S ++F    + +S+  S C+ S    NP   +IR    + S   V +D+  SSS      
Sbjct: 39  SSSIFVPISLSTSYGRSKCAFSISRKNP-KSTIRCDIAVKSAASVDADADLSSS------ 98

Query: 88  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRV 147
             TSL  EE DE A  +IGARVRV VPLKVYHV ++P+  L GMEG +KDYV +WKGK++
Sbjct: 99  --TSLETEE-DEKAKEKIGARVRVTVPLKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKI 158

Query: 148 SANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 182
           SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Sbjct: 159 SANLPFKVQFVKEIEGRGPVKFFTHLKEDEFELI 182

[Close]

BLAST of CsGy5G020000 vs. TAIR 10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 )

HSP 1 Score: 124.4 bits (311), Expect = 9.4e-29
Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 59  SIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVY 118
           S R+  R      V   S  S +A A  +++ S SEEE +  A A+IG+RVRV  PLKVY
Sbjct: 59  SSRKTSRTTIRCDVAIKSADSINADANPSSSPS-SEEEIEAEAKAKIGSRVRVTAPLKVY 118

Query: 119 HVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEF 178
           HV ++P+ +LEGMEG +KDYV VWKGKR+SANLPYK+EF   +EGR  VKFV+HLKE+EF
Sbjct: 119 HVNRVPEVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVKFVSHLKEDEF 178

Query: 179 EYV 182
           E++
Sbjct: 179 EFI 180

The following BLAST results are available for this feature:

BLAST of CsGy5G020000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80680	6.1e-25	62.11	Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1	[more]
P38365	4.7e-17	37.71	Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler...	[more]

BLAST of CsGy5G020000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147092.1	1.08e-114	100.00	ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 h...	[more]
XP_038893043.1	5.48e-108	94.48	ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]	[more]
XP_008445916.1	2.23e-107	92.82	PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]	[more]
KAA0034101.1	2.85e-98	92.82	sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphin...	[more]
XP_023549490.1	1.50e-95	86.19	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]

BLAST of CsGy5G020000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV36	5.21e-115	100.00	FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 P...	[more]
A0A1S3BEI2	1.08e-107	92.82	ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3D039	1.38e-98	92.82	Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1H0Z6	5.94e-95	85.64	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1KDF2	4.87e-94	85.08	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]

BLAST of CsGy5G020000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08410.1	6.5e-30	49.35	ferredoxin/thioredoxin reductase subunit A (variable subunit) 2	[more]
AT5G23440.1	9.4e-29	55.28	ferredoxin/thioredoxin reductase subunit A (variable subunit) 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 105..177 e-value: 3.7E-26 score: 91.1
None	No IPR available	GENE3D	2.30.30.50		coord: 103..181 e-value: 1.1E-29 score: 104.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..91
None	No IPR available	PANTHER	PTHR46937:SF4	FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAIN	coord: 27..181
IPR044166	Ferredoxin-thioredoxin reductase, variable chain	PANTHER	PTHR46937	FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAIN	coord: 27..181
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 104..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G020000.1	CsGy5G020000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0030148	sphingolipid biosynthetic process
molecular_function	GO:0017050	D-erythro-sphingosine kinase activity
molecular_function	GO:0003951	NAD+ kinase activity