CsGy5G019710 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G019710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription factor CYCLOIDEA
Location	Gy14Chr5: 26005297 .. 26006199 (+)
RNA-Seq Expression	CsGy5G019710
Synteny	CsGy5G019710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

mRNA sequence

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

Coding sequence (CDS)

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

Protein sequence

MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP*

Homology

[Close]

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 84  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSA 143
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 144 IKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKS 203
           +K+L Q+   K ++S       S  +D   V +V + N+      + +      K+ + S
Sbjct: 134 VKELVQSKSTKSNSS-------SPCDDCEEVVSVESENVTDHSKGKSLKANNKCKEAMDS 193

Query: 204 RTLRTVAREARDRARARARQRT 226
              +  A+E+R +ARARAR+RT
Sbjct: 194 H--QAAAKESRAKARARARERT 206

[Close]

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 84  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSA 143
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 144 IKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKS 203
           IK+L Q+   K ++S       S  +D   V +V + N+      + +      K+ + S
Sbjct: 134 IKELVQSKSTKSNSS-------SPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDS 193

Query: 204 RTLRTVAREARDRARARARQRT 226
              +  A+E+R +ARARAR+RT
Sbjct: 194 H--QAAAKESRAKARARARERT 206

[Close]

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 84  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSA 143
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +A
Sbjct: 82  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 141

Query: 144 IKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKS 203
           IK+L Q+   K ++S       S  +D   V +V + N+      + +      K+ + S
Sbjct: 142 IKELVQSKSTKSNSS-------SPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDS 201

Query: 204 RTLRTVAREARDRARARARQRT 226
              +  A+E+R +ARARAR+RT
Sbjct: 202 H--QAAAKESRAKARARARERT 214

[Close]

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-21
Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 17  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK--- 76
           NS+  +    FP    FL+  D+   ++ FL QQQ       +   +  KK++ KKK   
Sbjct: 35  NSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEK 94

Query: 77  -LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDK 136
            + GS+S       + K   K+DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDK
Sbjct: 95  CVDGSTSQEVQWRRTVK---KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDK 154

Query: 137 ASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQ 196
           ASKTIEWL   S ++IK LK+      S  G   E +                   E+++
Sbjct: 155 ASKTIEWLFSKSKTSIKQLKER--VAASEGGGKDEHLQ----------------VDEKEK 214

Query: 197 EDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLK 229
           ++       K + K+       +E+R+RAR RAR+RT+ K
Sbjct: 215 DETLKLRVSKRRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 85  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAI 144
           K   KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S  AI
Sbjct: 83  KHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAI 142

Query: 145 KDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIK-S 204
           K+L Q+   K + S   SE   E         V +++L      +  A  G   +K K  
Sbjct: 143 KELVQSKSSKSNISNSPSECDQE---------VLSADLPYIGSSKGKAAVGLNSNKCKGG 202

Query: 205 RTLRTVAREARDRARARARQRT 226
           R    +A+E+R +ARARAR+RT
Sbjct: 203 RDAVDLAKESRAKARARARERT 215

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: KGN51554.1 (hypothetical protein Csa_008919 [Cucumis sativus])

HSP 1 Score: 568 bits (1463), Expect = 1.44e-203
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60
           MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET
Sbjct: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60

Query: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180

Query: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 240
           NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS
Sbjct: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 240

Query: 241 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300
           ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Sbjct: 241 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_011656248.2 (transcription factor TCP12 [Cucumis sativus])

HSP 1 Score: 568 bits (1463), Expect = 4.86e-203
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60
           MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET
Sbjct: 34  MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 93

Query: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 94  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 153

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS
Sbjct: 154 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 213

Query: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 240
           NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS
Sbjct: 214 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 273

Query: 241 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300
           ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Sbjct: 274 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 333

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: TYK00281.1 (transcription factor CYCLOIDEA [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1355), Expect = 4.97e-187
Identity = 285/305 (93.44%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60
           MDDHQQQQH+E+QILINSYDDHD HYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET
Sbjct: 1   MDDHQQQQHRENQILINSYDDHDLHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60

Query: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           TKKMKKKKKLCGSSSSR NGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  TKKMKKKKKLCGSSSSRINGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVVNVAAS 180

Query: 181 N-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITS 240
           N L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDRARARARQRTLLKNTLLPNPPITS
Sbjct: 181 NHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDRARARARQRTLLKNTLLPNPPITS 240

Query: 241 SISQHFDHLSGNNNISSSS----NNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST 300
           SISQHFDHLSGNNNISS S    NNNNNTYLDYYPTFSCPS+S+FLPSPL LPYSF+DST
Sbjct: 241 SISQHFDHLSGNNNISSISSNNNNNNNNTYLDYYPTFSCPSSSVFLPSPLYLPYSFSDST 300

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_016903718.1 (PREDICTED: transcription factor CYCLOIDEA [Cucumis melo])

HSP 1 Score: 256 bits (655), Expect = 6.33e-83
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 107 MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 166
           MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS
Sbjct: 1   MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 60

Query: 167 EINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT 226
           EINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDRARARARQRT
Sbjct: 61  EINDNNGVVNVAASNHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDRARARARQRT 120

Query: 227 LLKNTLLPNPPITSSISQHFDHLS 249
           LLKNTLLPNPPITSSISQHFDHLS
Sbjct: 121 LLKNTLLPNPPITSSISQHFDHLS 144

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_022974210.1 (transcription factor CYCLOIDEA-like [Cucurbita maxima])

HSP 1 Score: 184 bits (468), Expect = 5.97e-53
Identity = 138/252 (54.76%), Postives = 159/252 (63.10%), Query Frame = 0


Query: 6   QQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDE 65
           Q+QH+E+  L          +FPHPFLD DDLFL+H LS QQ F       EQ  +   +
Sbjct: 23  QEQHEENLYL----------HFPHPFLDHDDLFLTHILSSQQFFIGADCWGEQEQEHEHD 82

Query: 66  TTKK---------MKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLS 125
            TK+         +KKKKK C  S +RKNGS S K+ GKKDRHSKIYTAQGPRDRR+RLS
Sbjct: 83  QTKQNSEKPRIEVVKKKKKKC--SGNRKNGS-SRKKTGKKDRHSKIYTAQGPRDRRIRLS 142

Query: 126 LQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SS 185
           LQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +     +NSG         S+
Sbjct: 143 LQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLA---NNSGHRYGSVCCGST 202

Query: 186 EVVSE-INDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARA 233
           E VSE I DNNG    A          ++ AF    K K +SR LR V RE+RDRARARA
Sbjct: 203 EAVSEMIRDNNGGGGAA----------KEAAFMATPKHK-QSRALRRVGRESRDRARARA 247

[Close]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL
Match: A0A0A0KRR2 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV=1)

HSP 1 Score: 568 bits (1463), Expect = 6.96e-204
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60
           MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET
Sbjct: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60

Query: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180

Query: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 240
           NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS
Sbjct: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSS 240

Query: 241 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300
           ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Sbjct: 241 ISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300

[Close]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL
Match: A0A5D3BKD8 (Transcription factor CYCLOIDEA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00230 PE=4 SV=1)

HSP 1 Score: 526 bits (1355), Expect = 2.40e-187
Identity = 285/305 (93.44%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60
           MDDHQQQQH+E+QILINSYDDHD HYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET
Sbjct: 1   MDDHQQQQHRENQILINSYDDHDLHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDET 60

Query: 61  TKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           TKKMKKKKKLCGSSSSR NGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  TKKMKKKKKLCGSSSSRINGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGV NVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVVNVAAS 180

Query: 181 N-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITS 240
           N L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDRARARARQRTLLKNTLLPNPPITS
Sbjct: 181 NHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDRARARARQRTLLKNTLLPNPPITS 240

Query: 241 SISQHFDHLSGNNNISSSS----NNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDST 300
           SISQHFDHLSGNNNISS S    NNNNNTYLDYYPTFSCPS+S+FLPSPL LPYSF+DST
Sbjct: 241 SISQHFDHLSGNNNISSISSNNNNNNNNTYLDYYPTFSCPSSSVFLPSPLYLPYSFSDST 300

[Close]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL
Match: A0A1S4E661 (transcription factor CYCLOIDEA OS=Cucumis melo OX=3656 GN=LOC103483044 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 3.07e-83
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 107 MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 166
           MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS
Sbjct: 1   MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 60

Query: 167 EINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRT 226
           EINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDRARARARQRT
Sbjct: 61  EINDNNGVVNVAASNHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDRARARARQRT 120

Query: 227 LLKNTLLPNPPITSSISQHFDHLS 249
           LLKNTLLPNPPITSSISQHFDHLS
Sbjct: 121 LLKNTLLPNPPITSSISQHFDHLS 144

[Close]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL
Match: A0A6J1IDD5 (transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111472832 PE=4 SV=1)

HSP 1 Score: 184 bits (468), Expect = 2.89e-53
Identity = 138/252 (54.76%), Postives = 159/252 (63.10%), Query Frame = 0


Query: 6   QQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDE 65
           Q+QH+E+  L          +FPHPFLD DDLFL+H LS QQ F       EQ  +   +
Sbjct: 23  QEQHEENLYL----------HFPHPFLDHDDLFLTHILSSQQFFIGADCWGEQEQEHEHD 82

Query: 66  TTKK---------MKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLS 125
            TK+         +KKKKK C  S +RKNGS S K+ GKKDRHSKIYTAQGPRDRR+RLS
Sbjct: 83  QTKQNSEKPRIEVVKKKKKKC--SGNRKNGS-SRKKTGKKDRHSKIYTAQGPRDRRIRLS 142

Query: 126 LQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SS 185
           LQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +     +NSG         S+
Sbjct: 143 LQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLA---NNSGHRYGSVCCGST 202

Query: 186 EVVSE-INDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARA 233
           E VSE I DNNG    A          ++ AF    K K +SR LR V RE+RDRARARA
Sbjct: 203 EAVSEMIRDNNGGGGAA----------KEAAFMATPKHK-QSRALRRVGRESRDRARARA 247

[Close]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL
Match: A0A6J1EPH0 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111436600 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 4.30e-52
Identity = 132/232 (56.90%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 26  YFPHPFLDDDDLFLSHFLSQQQQFF------EQRDQQLDETTKK---------MKKKKKL 85
           +FPHPFLD DDLFL+H LS Q  F       EQ  +Q  + TK+         +KKKKK 
Sbjct: 32  HFPHPFLDQDDLFLTHILSSQHFFIGADCWGEQEQEQHHDQTKQNSEKPRIEVVKKKKKC 91

Query: 86  CGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS 145
            G+   RKNGS S K+ GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS
Sbjct: 92  SGN---RKNGS-SRKKTGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS 151

Query: 146 KTIEWLLLNSNSAIKDLKQAYFFKYSNSGQ--------SSEVVSE-INDNNGVFNVAASN 205
            TIEWLL NS SAIKDL+ +     +NSG         S+E VSE I DNNG    A   
Sbjct: 152 NTIEWLLSNSTSAIKDLQHSLA---NNSGHRYGSVCCGSTEAVSEMIRDNNGGGGAA--- 211

Query: 206 LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLP 233
                  ++ AF    K K +SR LR V RE+RDRARARARQRT+LK    P
Sbjct: 212 -------KEAAFMATPKHK-QSRALRRVGRESRDRARARARQRTMLKKIKQP 245

[Close]

BLAST of CsGy5G019710 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-22
Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 17  NSYDDHDFHYFP--HPFLD--DDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKK--- 76
           NS+  +    FP    FL+  D+   ++ FL QQQ       +   +  KK++ KKK   
Sbjct: 35  NSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEK 94

Query: 77  -LCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDK 136
            + GS+S       + K   K+DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDK
Sbjct: 95  CVDGSTSQEVQWRRTVK---KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDK 154

Query: 137 ASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQ 196
           ASKTIEWL   S ++IK LK+      S  G   E +                   E+++
Sbjct: 155 ASKTIEWLFSKSKTSIKQLKER--VAASEGGGKDEHLQ----------------VDEKEK 214

Query: 197 EDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLK 229
           ++       K + K+       +E+R+RAR RAR+RT+ K
Sbjct: 215 DETLKLRVSKRRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]

BLAST of CsGy5G019710 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19
Identity = 75/171 (43.86%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 81  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNS 140
           S   K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S
Sbjct: 79  SKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKS 138

Query: 141 NSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG--VFNVAASNLYQEQDQEDVA 200
             AIK++ QA         + N G   E   E   D+NG   F    S  Y E++    A
Sbjct: 139 RKAIKEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEA 198

Query: 201 FTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ 244
              G + K KS      ++    +AR +A++RT  +     NP   S I+Q
Sbjct: 199 TKAGIRKK-KSELRNISSKGLGAKARGKAKERT-KEMMAYDNPETASDITQ 247

[Close]

BLAST of CsGy5G019710 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19
Identity = 75/171 (43.86%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 81  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNS 140
           S   K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S
Sbjct: 79  SKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKS 138

Query: 141 NSAIKDLKQAYFFK-----YSNSGQSSEVVSE-INDNNG--VFNVAASNLYQEQDQEDVA 200
             AIK++ QA         + N G   E   E   D+NG   F    S  Y E++    A
Sbjct: 139 RKAIKEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEA 198

Query: 201 FTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQ 244
              G + K KS      ++    +AR +A++RT  +     NP   S I+Q
Sbjct: 199 TKAGIRKK-KSELRNISSKGLGAKARGKAKERT-KEMMAYDNPETASDITQ 247

[Close]

BLAST of CsGy5G019710 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-15
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 80  GSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLN 139
           G +  +  G+KDRHSK+ TA+GPRDRR+RLS   A +F+D+QD LGFD+ SK ++WL+  
Sbjct: 40  GGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITK 99

Query: 140 SNSAIKDLKQ 150
           + SAI DL Q
Sbjct: 100 AKSAIDDLAQ 109

[Close]

BLAST of CsGy5G019710 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-14
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 74  SSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTI 133
           S+S+       K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKASKT+
Sbjct: 133 STSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTV 192

Query: 134 EWLLLNSNSAI 145
           EWLL  +   I
Sbjct: 193 EWLLTQAKPEI 203

The following BLAST results are available for this feature:

BLAST of CsGy5G019710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SBV9	2.5e-23	47.89	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G...	[more]
Q9SBV6	2.5e-23	48.59	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	2.5e-23	48.59	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
A0AQW4	2.3e-21	40.45	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
Q9SNW8	2.6e-20	48.59	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]

BLAST of CsGy5G019710 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51554.1	1.44e-203	100.00	hypothetical protein Csa_008919 [Cucumis sativus]	[more]
XP_011656248.2	4.86e-203	100.00	transcription factor TCP12 [Cucumis sativus]	[more]
TYK00281.1	4.97e-187	93.44	transcription factor CYCLOIDEA [Cucumis melo var. makuwa]	[more]
XP_016903718.1	6.33e-83	95.83	PREDICTED: transcription factor CYCLOIDEA [Cucumis melo]	[more]
XP_022974210.1	5.97e-53	54.76	transcription factor CYCLOIDEA-like [Cucurbita maxima]	[more]

BLAST of CsGy5G019710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRR2	6.96e-204	100.00	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV...	[more]
A0A5D3BKD8	2.40e-187	93.44	Transcription factor CYCLOIDEA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E661	3.07e-83	95.83	transcription factor CYCLOIDEA OS=Cucumis melo OX=3656 GN=LOC103483044 PE=4 SV=1	[more]
A0A6J1IDD5	2.89e-53	54.76	transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111472832 ...	[more]
A0A6J1EPH0	4.30e-52	56.90	transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111436600 PE...	[more]

BLAST of CsGy5G019710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68800.1	1.7e-22	40.45	TCP domain protein 12	[more]
AT1G67260.1	1.7e-19	43.86	TCP family transcription factor	[more]
AT1G67260.2	1.7e-19	43.86	TCP family transcription factor	[more]
AT1G53230.1	3.3e-15	54.29	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT3G18550.1	2.8e-14	57.75	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 88..229 e-value: 3.6E-40 score: 138.0
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 89..147 score: 35.487366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..101
None	No IPR available	PANTHER	PTHR31072:SF118	TRANSCRIPTION FACTOR TCP12	coord: 29..264
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 29..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G019710.1	CsGy5G019710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000032	regulation of secondary shoot formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding