CsGy5G019523 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G019523
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Location	Gy14Chr5: 25857836 .. 25862419 (+)
RNA-Seq Expression	CsGy5G019523
Synteny	CsGy5G019523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTAAATGACTTTTGTAGGGGTAAAGAGGTAATTTAAAGCTCTAGTCAAAGAATATGAACAAAAAAATGGTATTAATATTAAATACTATTTATTAATTAATAGTAGAATTTTACTGGGAAAATGAACCAACTTTTTTTCCTCTCTTCTCTTTCTTCAACATTCAATAAATTTCTCTTTTCAATTCAAAGTTTTAGACTAAAAAAATATAATGAAACCCCAAAAAGAAGAAAATAAGAAAAATAAAACCCCCAATTCCCAACGCTCTCAAAAATCCTCTCCGAATTCCCTTCTTCAATCATTACAAGATTTTCAAATTCCATTCCAAAACTCCATCCATCGATTCAATAATTCTTCTTCCTCTGACCTTTCTCCATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCTACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGTCGGAAAACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGTCGCCGCTCCTTACCGGAGAATAAGAACAGAGACGACCGTAAGGGTTTGTCGCGGAGTAACACGTTGAAGGATTTGTTCGTTTCCTCGCCACCGTATCTTGGAACTGACTGTGATGTTCACCAGACGGCGGTCACGGCTCCAACCCGGAACGTGACTCCAGTTTGTGAGAAGGAGAAGGAGGAGGGTCACGTTGGATCACCCGGTTGGAATCCCGGTTCCCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGTGCTCGTCGGAATCCCCGAGTAATGGATTCTCTTTTTTTTTTTTTTTTTTTTTTTAGTTTTAAAAGAAAACATCTTTTAATTAATTTAAAAATATATCTAATCTAATATTTCTATGTTTTTTTAGTATAGATTTCAATCTTTACTTAAAATAGGGATGGGGGAAAGGATTAAGATCTTAATCAAGTGGGTTTGGGGAAATAATAATTTGTTGCTATGGAAAATTATGAATAGATTTCCCATGAGTGGGAATTTGCTTATTTTTCTGTTCAATTTTACGCTTGTTTAGTTTTTCTAATCATATGTTAATTAGTCAAATTAACTCTATACAATTCGTAGTACCAAATTTAAGGCTTAAACCTTGATTGATTTTCTTGATTGTTTTATTATATAGTTTATGAAGTTGTATTTAAAATCTTGTTCTTAACTTTGTATGGTTTAGTTGGAGTGAGCAAATCCTAAACCAAATCTTTGATTGACCCCACTTTGACCATAGTCAAGAATAGTTAGTGAAATTTGAGTTAACAAATCTACTAGTGGCTTAACTCGATTTTAAAAAAAAAAAATTGATGAAGATTGTCATCCATCGGTTCTTTTTATATCCTAAGTATCGTTCTTCCACAAATTTGTGGACTTCCAAATCTAGAAATTTTAACACCTTCCATCCCATAGTTGGGGGAACACGTCGTCCTCTTGTATATACTATCATGCGAGTGTTTTCAGTGCACATGCTCAACCCACCTAATGCCTTCATTTTATGTGTGTACATCCGTTGAACATTCATGTGCACACGTACAATGGGTTGTTGGTTGAACATGCATGGAGCATCGGGTGGACATCATGTGGACTATTTGGATTTTGTACTAGGTGGTAGGTTACTCAAAAGTTGAAGTTCTTATCAAATAACAAATCGTTCGTATAAATATGGAAGTGTAATCATGTTTGGCATAAATTCTATTTAGAAACTATTAACTTTTGAACTCATTATTATTATTATTATCATCATCATCATCATCAATGATATGTGTTCTAAGGCCACACTTTAACGAGTTTGACCGTTAAGTTTCCAAAAGAATATTCAAATTTCTATTAAAGTGACCCATTAAAGAATTTAATCAAATAAAGGTTAAAATAGTACTGAGAGGAAGTTTAAGATTCAAAATATGAGATCTAAAACTAAAAAAGCCAAGGATCTAAACAAAAAATTAGTACAAAAGCTATTGTGTAATAATCAAAATATATTATTTCCTTTTAGTTTATTTATTTGGGACTTATTTTTTGAGGGATGTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAGAATTGGGACCAAGAATTTGAATCAGATATAGAAAAGGCATATGAAATGTTTCTGTCACAAAGAAAAAGCAAAATAAATTCCACTCCTAAAAAGCAACGCATCTCAACTTTAGATAAATATAACTCTGATTTCATTTGTAAAGACATAAAAATTGACGTGCCCTTTTGGTGGGATAAGTTCCTATTGCTGCCTTCAAGGATCTTCTCCATTTCTTTCTTATCGACCCCTTTACACAAATTTTCAACTTCATCCTTATGATCTTATTAGTTTATAGACTTAATTCATATTAAGCCGATGTGACTTCAAAAGTTTCAATTTAGTCTTATTTGACCAATTTGGTCCCTAAACATTTTATTTGTATGTTACAAATTTTCATTTGAGTTATTATGCTCGTGGACTATTTTTGGATTTAATACCGAAAAACTATTGTTCTCTCAAACTTCTACCAAACTAGTAAGAAAAAGAGGGAGAGAATAAATACTTAATCTCCAAAATTTAAGTTTGATACCATCTTAGTCCTTGTATTTTTAAGTTTAATATTGTAACTCTCTGGGTACCGTCAAATAATACATTTTTTTCCATATCTCAAAAACTTGAAAATCAAATTTGAAAACTCGAGTATCTAAATGCATGCTAGGGAGATCAAAAGTGTTCTTTTCATTATTATGCAACTCTTCCAAAATAAGAAAAAAACAGAGAAAAGAAGACACTAGATCTTAGTGAAAACCTAAGTACTTACAATTATTAGTTCAAAGTTAGTGCTAGATTTGATGTTTTCCCCCATAATTTATAAGCTTAGTTGTTTATACTTTTTCCCATATATCATGTACTCAAATTCATCTTCTGTTCTCACCAGGGCCCCACAATTTCACATTACCCATGTAATCTTGAGCACATCCATCTTCTTCTCAAGCATACACAAGTAATATATATCAATGACTAACCTCCACTGAGTATGATATGATATGGTATGAAAAACAGAATGAACAGTACGTACACGAAATGTGTATCAGGACAAAACAATTCAAATTTCAAGCTATAAATAAAATATAACCTTCATATAAAATGTATTGAAACAATCTATTATCCAATCAATGAATATATTAATGTAACTTGCTCAGCATTTCATTACCAAAATTCCTTGACTCGATAAGATACAAGTTTTAATATAGCTTTCATTCACTCACAAACACATGTGGATGCTACAGGTTTTGTTCTCTTTTTCCCACCTATAGCATCTCTTAACAAGAAACATGTTACAAAATTCACAGCACATGGCGAGCATGCGCTTATTCACCGCCAGAAAATTTTTATTGTTCGTTTATAAGATTTAGAAAAAAGTAAAAAATTAAAAAGCAACCAGATTTAATCAATGTCTAGATGTTAAGCGTTCTTTATTCCCCAGAGGAAAACTAGTTTGCTTACTTGGTTGGGATTGTGATTGTTGTATGTCGGAATCTCTAACTTCGTTTGCATCGTCTATGTTCGCCTTTTGGGCCTTCACATGACTATTGCTATTGGAGTTCGGATGGGTTTCTGAATATTTATCCTCACCAGAAGGTATAACTCGCAGTAGGAACCTATGTATCATTTCATAGCTGGTGAAAGTTATTACAGCAGATGGAGTTGTTCGCAACAGATTCGTCGCACAACCTCTATAAAAACCTGGGACACCTTCCTTTCGAAAAACCTTTTTGATACAGTCCATTACTCCTGAGTATTGAGGAGCAATGTTTCTGGCTTGGCCTTGCTCTTGTAGCCGGGAACGAACTACCTGGAGATGAAGTTTAAACAGGATAAAGAATTATTAAAGACACACATCACAAACACTTGCAGAGAGAGGGTTTAAAAACCTACCTCATGTGGGTAAGTCATTACCGAGGCCGTAACTTTCGACAATGAGGAGGCAATAGCTAAATGTCCTGGACTTAGTTTGTCAACGGTTGTGTTTTCTGGAAAGAAAACAAAACCAAAACCAGTTTAAAAAAGCAATCACATTTGAATGAGTACATACACGCTTACTGATATTCTATATTATAACCAAAAGATTATCATAGTTACGTACCTCTTTTTGCAATATACGATTTGAGCCTTTCGTATGCAGGAAATTGAATTGCAACATGACTTATCCCAACCAATGAAGGGATGATACCACTGTTCAAAGAACAAATCAAAGACATGTTCTCATAATTATTTTAAAATATGAGAATAGTACAACTTATGAGTCATTATTTGTCAGAACAAAAGTTTATCACAACAACCATTATCTCACTCATTACAGTCAAGCCACAAATTTGGGAAAACATATATCCATTAAGAACTTCAATTTTCACAAATATGGTGAGAACAAACCTGTAAAGCCCACGAATTCCTTCTTCACGTACAATCCTGGTAAATGCTGAAACCATGCCTGTGTAAGGAACCACACCAGGCCTCATTCCCTGTGT

mRNA sequence

TTAGTAAATGACTTTTGTAGGGGTAAAGAGGTAATTTAAAGCTCTAGTCAAAGAATATGAACAAAAAAATGGTATTAATATTAAATACTATTTATTAATTAATAGTAGAATTTTACTGGGAAAATGAACCAACTTTTTTTCCTCTCTTCTCTTTCTTCAACATTCAATAAATTTCTCTTTTCAATTCAAAGTTTTAGACTAAAAAAATATAATGAAACCCCAAAAAGAAGAAAATAAGAAAAATAAAACCCCCAATTCCCAACGCTCTCAAAAATCCTCTCCGAATTCCCTTCTTCAATCATTACAAGATTTTCAAATTCCATTCCAAAACTCCATCCATCGATTCAATAATTCTTCTTCCTCTGACCTTTCTCCATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCTACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGTCGGAAAACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGTCGCCGCTCCTTACCGGAGAATAAGAACAGAGACGACCGTAAGGGTTTGTCGCGGAGTAACACGTTGAAGGATTTGTTCGTTTCCTCGCCACCGTATCTTGGAACTGACTGTGATGTTCACCAGACGGCGGTCACGGCTCCAACCCGGAACGTGACTCCAGTTTGTGAGAAGGAGAAGGAGGAGGGTCACGTTGGATCACCCGGTTGGAATCCCGGTTCCCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGTGCTCGTCGGAATCCCCGAGTAATGGATTCTCTTTTTTTTTTTTTTTTTTTTTTTAGTTTTAAAAGAAAACATCTTTTAATTAATTTAAAAATATATCTAATCTAATATTTCTATGTTTTTTTAGTATAGATTTCAATCTTTACTTAAAATAGGGATGGGGGAAAGGATTAAGATCTTAATCAAGTGGGTTTGGGGAAATAATAATTTGTTGCTATGGAAAATTATGAATAGATTTCCCATGAGTGGGAATTTGCTTATTTTTCTGTTCAATTTTACGCTTGTTTAGTTTTTCTAATCATATGTTAATTAGTCAAATTAACTCTATACAATTCGTAGTACCAAATTTAAGGCTTAAACCTTGATTGATTTTCTTGATTGTTTTATTATATAGTTTATGAAGTTGTATTTAAAATCTTGTTCTTAACTTTGTATGGTTTAGTTGGAGTGAGCAAATCCTAAACCAAATCTTTGATTGACCCCACTTTGACCATAGTCAAGAATAGTTAGTGAAATTTGAGTTAACAAATCTACTAGTGGCTTAACTCGATTTTAAAAAAAAAAAATTGATGAAGATTGTCATCCATCGGTTCTTTTTATATCCTAAGTATCGTTCTTCCACAAATTTGTGGACTTCCAAATCTAGAAATTTTAACACCTTCCATCCCATAGTTGGGGGAACACGTCGTCCTCTTGTATATACTATCATGCGAGTGTTTTCAGTGCACATGCTCAACCCACCTAATGCCTTCATTTTATGTGTGTACATCCGTTGAACATTCATGTGCACACGTACAATGGGTTGTTGGTTGAACATGCATGGAGCATCGGGTGGACATCATGTGGACTATTTGGATTTTGTACTAGGTGGTAGGTTACTCAAAAGTTGAAGTTCTTATCAAATAACAAATCGTTCGTATAAATATGGAAGTGTAATCATGTTTGGCATAAATTCTATTTAGAAACTATTAACTTTTGAACTCATTATTATTATTATTATCATCATCATCATCATCAATGATATGTGTTCTAAGGCCACACTTTAACGAGTTTGACCGTTAAGTTTCCAAAAGAATATTCAAATTTCTATTAAAGTGACCCATTAAAGAATTTAATCAAATAAAGGTTAAAATAGTACTGAGAGGAAGTTTAAGATTCAAAATATGAGATCTAAAACTAAAAAAGCCAAGGATCTAAACAAAAAATTAGTACAAAAGCTATTGTGTAATAATCAAAATATATTATTTCCTTTTAGTTTATTTATTTGGGACTTATTTTTTGAGGGATGTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAGAATTGGGACCAAGAATTTGAATCAGATATAGAAAAGGCATATGAAATGTTTCTGTCACAAAGAAAAAGCAAAATAAATTCCACTCCTAAAAAGCAACGCATCTCAACTTTAGATAAATATAACTCTGATTTCATTTGTAAAGACATAAAAATTGACGTGCCCTTTTGGTGGGATAAGTTCCTATTGCTGCCTTCAAGGATCTTCTCCATTTCTTTCTTATCGACCCCTTTACACAAATTTTCAACTTCATCCTTATGATCTTATTAGTTTATAGACTTAATTCATATTAAGCCGATGTGACTTCAAAAGTTTCAATTTAGTCTTATTTGACCAATTTGGTCCCTAAACATTTTATTTGTATGTTACAAATTTTCATTTGAGTTATTATGCTCGTGGACTATTTTTGGATTTAATACCGAAAAACTATTGTTCTCTCAAACTTCTACCAAACTAGTAAGAAAAAGAGGGAGAGAATAAATACTTAATCTCCAAAATTTAAGTTTGATACCATCTTAGTCCTTGTATTTTTAAGTTTAATATTGTAACTCTCTGGGTACCGTCAAATAATACATTTTTTTCCATATCTCAAAAACTTGAAAATCAAATTTGAAAACTCGAGTATCTAAATGCATGCTAGGGAGATCAAAAGTGTTCTTTTCATTATTATGCAACTCTTCCAAAATAAGAAAAAAACAGAGAAAAGAAGACACTAGATCTTAGTGAAAACCTAAGTACTTACAATTATTAGTTCAAAGTTAGTGCTAGATTTGATGTTTTCCCCCATAATTTATAAGCTTAGTTGTTTATACTTTTTCCCATATATCATGTACTCAAATTCATCTTCTGTTCTCACCAGGGCCCCACAATTTCACATTACCCATGTAATCTTGAGCACATCCATCTTCTTCTCAAGCATACACAAGTAATATATATCAATGACTAACCTCCACTGAGTATGATATGATATGGTATGAAAAACAGAATGAACAGTACGTACACGAAATGTGTATCAGGACAAAACAATTCAAATTTCAAGCTATAAATAAAATATAACCTTCATATAAAATGTATTGAAACAATCTATTATCCAATCAATGAATATATTAATGTAACTTGCTCAGCATTTCATTACCAAAATTCCTTGACTCGATAAGATACAAGTTTTAATATAGCTTTCATTCACTCACAAACACATGTGGATGCTACAGGTTTTGTTCTCTTTTTCCCACCTATAGCATCTCTTAACAAGAAACATGTTACAAAATTCACAGCACATGGCGAGCATGCGCTTATTCACCGCCAGAAAATTTTTATTGTTCGTTTATAAGATTTAGAAAAAAGTAAAAAATTAAAAAGCAACCAGATTTAATCAATGTCTAGATGTTAAGCGTTCTTTATTCCCCAGAGGAAAACTAGTTTGCTTACTTGGTTGGGATTGTGATTGTTGTATGTCGGAATCTCTAACTTCGTTTGCATCGTCTATGTTCGCCTTTTGGGCCTTCACATGACTATTGCTATTGGAGTTCGGATGGGTTTCTGAATATTTATCCTCACCAGAAGGTATAACTCGCAGTAGGAACCTATGTATCATTTCATAGCTGGTGAAAGTTATTACAGCAGATGGAGTTGTTCGCAACAGATTCGTCGCACAACCTCTATAAAAACCTGGGACACCTTCCTTTCGAAAAACCTTTTTGATACAGTCCATTACTCCTGAGTATTGAGGAGCAATGTTTCTGGCTTGGCCTTGCTCTTGTAGCCGGGAACGAACTACCTGGAGATGAAGTTTAAACAGGATAAAGAATTATTAAAGACACACATCACAAACACTTGCAGAGAGAGGGTTTAAAAACCTACCTCATGTGGGTAAGTCATTACCGAGGCCGTAACTTTCGACAATGAGGAGGCAATAGCTAAATGTCCTGGACTTAGTTTGTCAACGGTTGTGTTTTCTGGAAAGAAAACAAAACCAAAACCAGTTTAAAAAAGCAATCACATTTGAATGAGTACATACACGCTTACTGATATTCTATATTATAACCAAAAGATTATCATAGTTACGTACCTCTTTTTGCAATATACGATTTGAGCCTTTCGTATGCAGGAAATTGAATTGCAACATGACTTATCCCAACCAATGAAGGGATGATACCACTGTTCAAAGAACAAATCAAAGACATGTTCTCATAATTATTTTAAAATATGAGAATAGTACAACTTATGAGTCATTATTTGTCAGAACAAAAGTTTATCACAACAACCATTATCTCACTCATTACAGTCAAGCCACAAATTTGGGAAAACATATATCCATTAAGAACTTCAATTTTCACAAATATGGTGAGAACAAACCTGTAAAGCCCACGAATTCCTTCTTCACGTACAATCCTGGTAAATGCTGAAACCATGCCTGTGTAAGGAACCACACCAGGCCTCATTCCCTGTGT

Coding sequence (CDS)

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCTACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGTCGGAAAACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGTCGCCGCTCCTTACCGGAGAATAAGAACAGAGACGACCGTAAGGGTTTGTCGCGGAGTAACACGTTGAAGGATTTGTTCGTTTCCTCGCCACCGTATCTTGGAACTGACTGTGATGTTCACCAGACGGCGGTCACGGCTCCAACCCGGAACGTGACTCCAGTTTGTGAGAAGGAGAAGGAGGAGGGTCACGTTGGATCACCCGGTTGGAATCCCGGTTCCCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGTGCTCGTCGGAATCCCCGAGTAA

Protein sequence

MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE*

Homology

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BLAST of CsGy5G019523 vs. NCBI nr
Match: XP_011655483.1 (uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical protein Csa_008562 [Cucumis sativus])

HSP 1 Score: 313 bits (803), Expect = 7.74e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153

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BLAST of CsGy5G019523 vs. NCBI nr
Match: XP_008467191.1 (PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncharacterized protein E5676_scaffold1728G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (743), Expect = 1.17e-98
Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  ENKNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVG 120
           ENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVTAPT+N TPVCEKEKEEG VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 155

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BLAST of CsGy5G019523 vs. NCBI nr
Match: XP_038875200.1 (uncharacterized protein LOC120067717 [Benincasa hispida])

HSP 1 Score: 263 bits (672), Expect = 6.84e-88
Identity = 133/153 (86.93%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP RR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPHRRALPEK 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           K RDD K LSRSNTLKDLFVSSPPY+ TD D+H+TAV APTR+ T VC KEKE+G VGS 
Sbjct: 61  K-RDDHKELSRSNTLKDLFVSSPPYVATDGDIHETAVAAPTRDATTVC-KEKEDGEVGSA 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 151

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BLAST of CsGy5G019523 vs. NCBI nr
Match: XP_023513243.1 (uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246 bits (629), Expect = 2.37e-81
Identity = 122/153 (79.74%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           K RDD K LSRSNTLKDLFVSSPPY  ++C++++T   AP RNVTPVC +E  +G +G  
Sbjct: 61  K-RDDHKDLSRSNTLKDLFVSSPPYDESECEINETVAAAPIRNVTPVCREE--DGEIGPT 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Sbjct: 121 GWHPGSPRPGWTGFRYKYLLRKTWRPLLAGIPE 150

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BLAST of CsGy5G019523 vs. NCBI nr
Match: KAG7032525.1 (hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (621), Expect = 3.93e-80
Identity = 122/153 (79.74%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           K RDD K LSRSNTLKDLFVSSPPY  +D ++++T   AP RNVTPVC +E  +G +G  
Sbjct: 61  K-RDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREE--DGEIGPT 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Sbjct: 121 GWHPGSPRPGWTGFRYKYLLRKTWRPLLAGIPE 150

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BLAST of CsGy5G019523 vs. ExPASy TrEMBL
Match: A0A0A0KPK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1)

HSP 1 Score: 313 bits (803), Expect = 3.75e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153

[Close]

BLAST of CsGy5G019523 vs. ExPASy TrEMBL
Match: A0A5D3BMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00090 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 5.68e-99
Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  ENKNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVG 120
           ENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVTAPT+N TPVCEKEKEEG VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 155

[Close]

BLAST of CsGy5G019523 vs. ExPASy TrEMBL
Match: A0A1S3CSY3 (uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 5.68e-99
Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  ENKNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVG 120
           ENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVTAPT+N TPVCEKEKEEG VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 155

[Close]

BLAST of CsGy5G019523 vs. ExPASy TrEMBL
Match: A0A6J1HGM7 (uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC111463373 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 7.40e-78
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           K RDD K LSRSNTLKDLFVSSPPY  +D ++++T   AP RNVTPVC +E  +G +G  
Sbjct: 61  K-RDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREE--DGEIGPT 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
            W+PGSPRPGWTGFR+KYLLRKTWRP+L  IPE
Sbjct: 121 SWHPGSPRPGWTGFRHKYLLRKTWRPLLASIPE 150

[Close]

BLAST of CsGy5G019523 vs. ExPASy TrEMBL
Match: A0A6J1FLF8 (uncharacterized protein LOC111445302 OS=Cucurbita moschata OX=3662 GN=LOC111445302 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 1.09e-77
Identity = 120/153 (78.43%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60
           MASLLKFKLL THCGVAQSPTLSPRTSPL+HLRRRKTTLRMLLTRN  RRSPRR +LPE 
Sbjct: 1   MASLLKFKLLSTHCGVAQSPTLSPRTSPLLHLRRRKTTLRMLLTRNFSRRSPRRCALPE- 60

Query: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120
           KN DDRK L+R N LKDLFVSSPPY GTD  +++TA+ AP RNVTPVC+K+ ++ H+GS 
Sbjct: 61  KNIDDRKDLTRGNKLKDLFVSSPPYDGTDARINETAIAAPIRNVTPVCKKKADD-HIGSA 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153
           G  PGSPRPGWTGFRYKYLL+KTWRPVL GIPE
Sbjct: 121 GCKPGSPRPGWTGFRYKYLLQKTWRPVLAGIPE 151

[Close]

BLAST of CsGy5G019523 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 73/164 (44.51%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 3   SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRSLPE 62
           SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLTR+S R R P  + ++ E
Sbjct: 2   SLQKFKLLATHCSTVAESPT----RSPVIHLRRRK-TLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  NKNRDDRKGLSRSNTLKDLFVSSPPY----------LGTDCDVHQTAVTAPTRNVTPVCE 122
           +K  D R  +  S  L DLFVSSPP+           GT  +V       P   V+    
Sbjct: 62  SKKTDKRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMER-DVPVNGVSNNA- 121

Query: 123 KEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 154
              EE      G+N GS RP  +      LLR++WRPVLV IPE
Sbjct: 122 GFGEEITARRVGFN-GSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of CsGy5G019523 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 63/164 (38.41%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSL 60
           MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+  S  R   ++ L
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQLRRKKTTLKMLLSLASPSRR-EQQPL 60

Query: 61  PENKNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHV 120
             + ++D          LKDLFVSS            +A      +  P  + ++E    
Sbjct: 61  IHHHHKD-----VAGRKLKDLFVSS-----------SSAEEEQEEDERPKGKTKEEVLAA 120

Query: 121 GSPGWNPGS--------PRPGWTGFRYKYLLRKTWRPVLVGIPE 154
            +   N  S          P W GF  K LL++ WRP L  I E
Sbjct: 121 MAAKLNAASRLQCESADAAPVWFGFS-KRLLQRAWRPKLGTIHE 146

[Close]

BLAST of CsGy5G019523 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 60/171 (35.09%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 1   MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRR 60
           ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  RR   R+
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRRK-TLRMLFDKSSDSRRRNLRQ 62

Query: 61  SLPENKNRDDRKGLSRSNT-------LKDLFVS--SPPYLGTDCDV----HQTAVTAPTR 120
            L E+   D   G  +          L++L V+  SPPY G + D+     + +  +P  
Sbjct: 63  ILEESPESDGNSGNKKRGNHRATRRKLRELLVTSPSPPYKGRE-DIDGIGEERSEISPLN 122

Query: 121 NVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 154
             +    +E      GS G            FR + +LRK WRPVLV IPE
Sbjct: 123 VTSNGDGRELTARRFGSSG--------SVQSFRLR-ILRKPWRPVLVSIPE 162

The following BLAST results are available for this feature:

BLAST of CsGy5G019523 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G019523 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655483.1	7.74e-108	100.00	uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical ...	[more]
XP_008467191.1	1.17e-98	93.55	PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncha...	[more]
XP_038875200.1	6.84e-88	86.93	uncharacterized protein LOC120067717 [Benincasa hispida]	[more]
XP_023513243.1	2.37e-81	79.74	uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]	[more]
KAG7032525.1	3.93e-80	79.74	hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsGy5G019523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPK6	3.75e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1	[more]
A0A5D3BMD8	5.68e-99	93.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSY3	5.68e-99	93.55	uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=...	[more]
A0A6J1HGM7	7.40e-78	77.78	uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1FLF8	1.09e-77	78.43	uncharacterized protein LOC111445302 OS=Cucurbita moschata OX=3662 GN=LOC1114453...	[more]

BLAST of CsGy5G019523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66890.1	1.7e-15	44.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G68430.1	3.7e-10	38.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16200.1	1.8e-09	35.09	50S ribosomal protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..72
None	No IPR available	PANTHER	PTHR34542:SF1	OS08G0359900 PROTEIN	coord: 1..153
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G019523.1	CsGy5G019523.1	mRNA