CsGy5G018890 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G018890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	mediator of RNA polymerase II transcription subunit 23
Location	Gy14Chr5: 25294644 .. 25299373 (-)
RNA-Seq Expression	CsGy5G018890
Synteny	CsGy5G018890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGACGAACACTGCCAAATTCCGAGTTCTTCAGTTCGTTGATTCCGGTTTCAAGTCCTGTGATTCTTCCTGAAATTCCAAGAGCTCGAGCTGTTGGAACTGGGAATGAGAAGATGGATCAATCACAACGATCCTCATCACTAACGACAGTCTCCACTTCCCGTGCTTACCAGTTCCACCCAGCTCGAGCTGCCATTGTCAATCTCTTCGACCTCTACTTAGGAGTAATAACTTAATTTCCCTTGTCCTCACCTTTTTTCTCTCTCATTTTAAGTTTCCATCTTTATTTTACAAACAGCATCTTCTGTGCTTATTTTTTTTTTTTTTTTTTTTGGGCAGAGGAGTAATCGTCTAAAGCATGAAGATTCAGCTAGAGAACCTCCGTGAGTGTTTTTCTCTATTATATTGTTTATGTCTTTGTTGCTTTATTGGTTTATGTTTTTTCAAAAAACGTGTTTGTGTTTTTGCTGGTTTTATTTTGCAATCTTTCTTATTATATGATTCTGACATTAGTTCCTTTAAACTGAATCTGGATAGTTTAAAAACTAGGTGAATCACATTGTTCTGTTTGAGCGGCTAAACATTTGTCTCACTAAATTCCAATTGATGCCATATTCCTCTTTTGACATGGTCCATGATCCAATTCTCTCTGGAAATATTTTTAGTGTATTTTTTGGTGTTTCTGCAATTATGAACCAGAATTTATGCCATAACATATCTCAGTGGTCATCTACTTAGGTTTTAATATCATATTAGATTTCTTGAAAATTAAATATAGAGTGAGATGGTTGTCCCCTGAGAATAGTCAGGAGCATGCAATGGGCCTCGCACGAATATCCATTTTTTTTCTTTTTATCATAACATAGCCCGCCCTTTTTAAGAGATTAGAAGCAGATACACTATATAGCCTGTTTTTAAGACTAACCAGCCTAAACAGGAACTATGAAATGAGCTACCTACATCTAGTTGTTACATGAACAACCAATTTCTGTTTTTTTTTTTCCCTCTTTTTTGTGTCAATTTCATTCCATAAGACTTGGAGATTCTTTTACAACATTACTTGAACCGGATTTGTGCTGTAGGTTGCACAACCATGACATTTTTTTGAGCCAACGAACAAGTGTGTACTTGAGTTCTAAGATTATTTGGAGATTATTTTTTTAATTATTCTTTTACGTATGTCTTTTAAAGTAAATTGAGGTACAAAGCCTGAAAGCAACAATGTCTGTTGCTGTTCTTCTGTGGGTAAACCTGTGCAAAAACATATGGTTCAGTGTGTTATTTGATAATGGAAAATGATTTGCATGCTCTAATCCCCAATCCATCGACTGAAAACTCAACGATGGCTATACTTTTGGTTGTCATTGCTCTTTTATTTTCTTGGAATATATTTTTCTTGTTAAAAAAGGCTTTACCTTTCTGTTTTTTTGTGCAATAGAAAATATTCTTCGCTTTTTACAAGAAAAACACATGTGTTATTGGTATTTAAGTGATCTGATGTGCACGCTGAGTTGCACGTTTCTCATTTTCGATTTATTTTATTTTATCCTTAATTGATATTGTGCTTCCCTGTAGCGAGTTTGCTGAATTGAGTTGTGATAGGTGATTTTGTTTTCATTTTATCAATTGGTGGCGTGAAAGTTAATTTCTCAATATTTTTCTTTCCATTATTGTTCTATTAAATTTTCTATTGACAATGAGAGCCATATGCTTTTATGAGAGGATCATTAAATTGGCACAAAGTGTTCCAGTTTGTTGCGTGATTGCTCAAATTGAAAATTTGAGGGTATGATGGTAACAACTGTTATGCTTCATGGGTTTTTAAAATTTCCTAAAGTGAACAACTGAATGAAGATACAATACTGGGTGCTGCTGAGTTGGAAATTAGGTTTAAAGTACGAAGTTATTGCTTGGCTCTGGACATTTGGCTGTTGCATTCATAAGTTCTGTAATTTTTCTGATGATGAAATATCGTTTTCGTGCCCTGGTAAACAATAATTGAAGTAAATACATAAAAATAAAAGGGGCAGTTTCAAATATAGCAAAATGAACCAAAATATTTACCAAATATAGCAAGATTTTAGATTCTATCAATGATAGATACCTATAGAATCTTAAAATTTTGCTATATTTTATAAATATTTTCACAAATTTTACCATTTACAATAATTTTCCAAAATTTTTATTTGAAAAGGAAACAAATCTCTATTATTAATAATTAAATATAGAGACAAAAGCTCATTGTACAAGAGGGTTATACAATGAGCAAAAGAAAGAGAGAAAAAAAATCAAATATTACAATAATTTCTCAAAATAGAATGCTAAATCAACTAGAAGAAAAAAAATTCAAATATTGCATGGATAAATTCTTTATGTGGAACTTCTCTAATCTTAATTTTTGTTACACTTCTTCAGGAACAAGGCTCAAAAGCGTGTACTAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAATTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTTCAGTGAGTTACAGAACTTAATTCAAAATTTCATATCATGAAGCATTTGAACATTTTCATTTTCTTCCATTTCACCAAACAATATTGAACACTGTGTCTAACAAACGGGGCAACCTATCGGCTTTCAGGACCATGATCAGTTGCGTGCTGTGACTGAGTCTGTTCTCATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATCAATTGGGACACTTTTCTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCATGGGTCAGGGAAGTCAAGCTGCGCCTACTGTCTCAACAACAAATTTATCACAGTCTGGGGTGCTTCCATCCTCAAATCCAGTGCCTAATAGTTCTACCTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATTGGTTCATGGAATCAGTTCACCCGCTCAGTCTAGTATTGATCCATCTTCTTGCACAGCATTGTCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTGCCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTTCGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTAAAACCAGTGACTCATGCTGATATCTTTTCCCACATGCTCAATTGGATGGTTAATTGGGACCAACGGCAACAGGGGATGGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTAGTCTGGCTTTTGGTTGAGGAGAATAAATGTCGGGTGCCCTTCTATGAATTACTACGCAGTGGTTTGCAATTCATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATGTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACAGCCCTACATTTGGCACTCAACGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTTGCGCTATTCACCAATCACATACCCAAGTGTTCTTGGTGAACCTCTTCATGGCGAGGTGAATTAACTTAATCTTGAGCTCAAAGAGGGTTTCTATTTAATGTCAGAGTGAGTAAAAAAGAGGAAAACCAAAAATGTATCTTGTCTAGCTATATGAGTGGCGTAGAAATAAAAGAAAATGAAAGGAAAACATGCAATACAATCATATCTCTCCAGGCTAATTGACAATTTCTTCCCCCTGTAGGTGAGGTTAAATTTTTGAAACATTTTAGGTGTATGTTATAAGTTGAAAAGATATTGCAATTATCTATATGTAATAGAGTCTGCTACTCTTTAGCTTCATTATGGAAAAATGGAACCAATGGGAGCCTGTTATGAAGTCTTCTTTATGAATTGCCAAATATTTGCGTAGTAAAACATTCATCAACTGTGATTTCAGATCTTTTATTATCTGCTTTATCATCTCTAATACTTCTTGTCCCTGTATCATTGTGTACCTTTATATATTGCCATATCGCCTTCCTAATTCTCTCAATTTTATTGAGTTTTTTTTTAAAATTTTTATTTTGCATGTTATGTGATTTCAATTATAGAAATCCAACTTGAAATATACACCTTGTTTTTCTCTTCTCAAATATACTGTATGGCTTCTAAATACTTGTAGCTTTCATACACTGACTGATACAATTCCCGTTTCTCATTTATTCATTTGATTGACATTCTATGAAGTTAAATTGGTTTTATTTATCTGGTTTAGGATATTGCATCTGCTATTCAGAGAGGAACTCGAGATTGGGAAAGAGCTATGCGTTGTATAAGGCACGCTCTTCGCACAACTCCATCACCGGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTGGCTATAGGTCTTCTGCACAAGGACTCAGTCCTGGTGCAGTTTTTACATCCGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAATTTCTTTGTTATTCTTCCTTTTATCCAGCGACTTAGTCATGATATTCTTTATGAAAGTTGGTTTCTTGTAAAGAAAAATGTTAGATGAGATAATAGTAAATCGACGTTCACCTCTAAACTTAAACTTGGTTAATCAATAATCTAACATGGTATCAGAACAAG

mRNA sequence

AAAGACGAACACTGCCAAATTCCGAGTTCTTCAGTTCGTTGATTCCGGTTTCAAGTCCTGTGATTCTTCCTGAAATTCCAAGAGCTCGAGCTGTTGGAACTGGGAATGAGAAGATGGATCAATCACAACGATCCTCATCACTAACGACAGTCTCCACTTCCCGTGCTTACCAGTTCCACCCAGCTCGAGCTGCCATTGTCAATCTCTTCGACCTCTACTTAGGAAGGAGTAATCGTCTAAAGCATGAAGATTCAGCTAGAGAACCTCCGAACAAGGCTCAAAAGCGTGTACTAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAATTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTTCAGACCATGATCAGTTGCGTGCTGTGACTGAGTCTGTTCTCATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATCAATTGGGACACTTTTCTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCATGGGTCAGGGAAGTCAAGCTGCGCCTACTGTCTCAACAACAAATTTATCACAGTCTGGGGTGCTTCCATCCTCAAATCCAGTGCCTAATAGTTCTACCTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATTGGTTCATGGAATCAGTTCACCCGCTCAGTCTAGTATTGATCCATCTTCTTGCACAGCATTGTCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTGCCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTTCGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTAAAACCAGTGACTCATGCTGATATCTTTTCCCACATGCTCAATTGGATGGTTAATTGGGACCAACGGCAACAGGGGATGGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTAGTCTGGCTTTTGGTTGAGGAGAATAAATGTCGGGTGCCCTTCTATGAATTACTACGCAGTGGTTTGCAATTCATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATGTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACAGCCCTACATTTGGCACTCAACGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTTGCGCTATTCACCAATCACATACCCAAGTGTTCTTGGTGAACCTCTTCATGGCGAGGATATTGCATCTGCTATTCAGAGAGGAACTCGAGATTGGGAAAGAGCTATGCGTTGTATAAGGCACGCTCTTCGCACAACTCCATCACCGGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTGGCTATAGGTCTTCTGCACAAGGACTCAGTCCTGGTGCAGTTTTTACATCCGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAATTTCTTTGTTATTCTTCCTTTTATCCAGCGACTTAGTCATGATATTCTTTATGAAAGTTGGTTTCTTGTAAAGAAAAATGTTAGATGAGATAATAGTAAATCGACGTTCACCTCTAAACTTAAACTTGGTTAATCAATAATCTAACATGGTATCAGAACAAG

Coding sequence (CDS)

ATGGATCAATCACAACGATCCTCATCACTAACGACAGTCTCCACTTCCCGTGCTTACCAGTTCCACCCAGCTCGAGCTGCCATTGTCAATCTCTTCGACCTCTACTTAGGAAGGAGTAATCGTCTAAAGCATGAAGATTCAGCTAGAGAACCTCCGAACAAGGCTCAAAAGCGTGTACTAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAATTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTTCAGACCATGATCAGTTGCGTGCTGTGACTGAGTCTGTTCTCATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATCAATTGGGACACTTTTCTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCATGGGTCAGGGAAGTCAAGCTGCGCCTACTGTCTCAACAACAAATTTATCACAGTCTGGGGTGCTTCCATCCTCAAATCCAGTGCCTAATAGTTCTACCTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATTGGTTCATGGAATCAGTTCACCCGCTCAGTCTAGTATTGATCCATCTTCTTGCACAGCATTGTCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTGCCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTTCGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTAAAACCAGTGACTCATGCTGATATCTTTTCCCACATGCTCAATTGGATGGTTAATTGGGACCAACGGCAACAGGGGATGGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTAGTCTGGCTTTTGGTTGAGGAGAATAAATGTCGGGTGCCCTTCTATGAATTACTACGCAGTGGTTTGCAATTCATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATGTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACAGCCCTACATTTGGCACTCAACGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTTGCGCTATTCACCAATCACATACCCAAGTGTTCTTGGTGAACCTCTTCATGGCGAGGATATTGCATCTGCTATTCAGAGAGGAACTCGAGATTGGGAAAGAGCTATGCGTTGTATAAGGCACGCTCTTCGCACAACTCCATCACCGGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTGGCTATAGGTCTTCTGCACAAGGACTCAGTCCTGGTGCAGTTTTTACATCCGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAATTTCTTTGTTATTCTTCCTTTTATCCAGCGACTTAGTCATGATATTCTTTATGAAAGTTGGTTTCTTGTAAAGAAAAATGTTAGATGA

Protein sequence

MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSGNYNFFVILPFIQRLSHDILYESWFLVKKNVR*

Homology

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BLAST of CsGy5G018890 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 2.5e-172
Identity = 323/505 (63.96%), Postives = 386/505 (76.44%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQR+ +  T S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV 
Sbjct: 1   MDQSQRTVA-ATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVH 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  APNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSS 180
           +LC I YINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P         
Sbjct: 121 TLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP--------- 180

Query: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLR 240
              S NP S LP  HGI SP+ S +        S      ++  G     +A+R +  +R
Sbjct: 181 --VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIR 240

Query: 241 NNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP 300
             A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Sbjct: 241 AAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVG-KSWRS 300

Query: 301 DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRD 360
           +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTL++EIHRRRD
Sbjct: 301 EKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRD 360

Query: 361 MMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIA 420
            MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR+SPITYPSVLGEPL+GED+A
Sbjct: 361 AMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLA 420

Query: 421 SAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMIC 480
            +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MIC
Sbjct: 421 MSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIC 480

Query: 481 EATIDRIFELLKLTNSGNYNFFVIL 501
           EA IDRI ELLKLTNSGN  F + L
Sbjct: 481 EAIIDRIVELLKLTNSGNDCFGIDL 485

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BLAST of CsGy5G018890 vs. NCBI nr
Match: TYK30505.1 (mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 992 bits (2564), Expect = 0.0
Identity = 506/514 (98.44%), Postives = 507/514 (98.64%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLP VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNSGNYNFFVILPFIQRLSHDILYES 514
           RIFELLKLTNSGNYNFFVIL FIQRLS  ILYE 
Sbjct: 481 RIFELLKLTNSGNYNFFVILLFIQRLSPYILYEK 514

[Close]

BLAST of CsGy5G018890 vs. NCBI nr
Match: XP_011655454.1 (mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus] >KAE8648601.1 hypothetical protein Csa_009222 [Cucumis sativus])

HSP 1 Score: 965 bits (2495), Expect = 0.0
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNS 491
           RIFELLKLTNS
Sbjct: 481 RIFELLKLTNS 491

[Close]

BLAST of CsGy5G018890 vs. NCBI nr
Match: XP_008467111.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo] >KAA0046342.1 mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 487/491 (99.19%), Postives = 488/491 (99.39%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLP VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNS 491
           RIFELLKLTNS
Sbjct: 481 RIFELLKLTNS 491

[Close]

BLAST of CsGy5G018890 vs. NCBI nr
Match: XP_038875594.1 (mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida])

HSP 1 Score: 945 bits (2443), Expect = 0.0
Identity = 481/491 (97.96%), Postives = 485/491 (98.78%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLK EDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKPEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSIGYINWDTFLPSLLSS+SSAEVS+GQGSQAA TVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAASTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASP P VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPSPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNS 491
           RIFELLKLTNS
Sbjct: 481 RIFELLKLTNS 491

[Close]

BLAST of CsGy5G018890 vs. NCBI nr
Match: KAG7016782.1 (Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 926 bits (2394), Expect = 0.0
Identity = 472/492 (95.93%), Postives = 482/492 (97.97%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQ QRSSS+T VSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRV+
Sbjct: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPT-VSTTNLSQSGVLPSSNPVPNSS 180
           SLCSIGYINWDTFLPSLLSSISSAEVS+GQGSQAAPT VSTTNLSQSGVLPSSNPVPNSS
Sbjct: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180

Query: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
           TFQSSNPASPLP VHGISSPAQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
Sbjct: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA 300
           ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Sbjct: 241 ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMA 360
           LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAI 420
           MHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SPITYPSVLGEPLHGEDIASAI
Sbjct: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATI 480
           QRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATI
Sbjct: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480

Query: 481 DRIFELLKLTNS 491
           DRIFELLKLTNS
Sbjct: 481 DRIFELLKLTNS 492

[Close]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL
Match: A0A0A0KUT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G565790 PE=3 SV=1)

HSP 1 Score: 1011 bits (2613), Expect = 0.0
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNSGNYNFFVILPFIQRLSHDILYE 513
           RIFELLKLTNSGNYNFFVILPFIQRLSHDILYE
Sbjct: 481 RIFELLKLTNSGNYNFFVILPFIQRLSHDILYE 513

[Close]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL
Match: A0A5D3E5C4 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00480 PE=3 SV=1)

HSP 1 Score: 992 bits (2564), Expect = 0.0
Identity = 506/514 (98.44%), Postives = 507/514 (98.64%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLP VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNSGNYNFFVILPFIQRLSHDILYES 514
           RIFELLKLTNSGNYNFFVIL FIQRLS  ILYE 
Sbjct: 481 RIFELLKLTNSGNYNFFVILLFIQRLSPYILYEK 514

[Close]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 487/491 (99.19%), Postives = 488/491 (99.39%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLP VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNS 491
           RIFELLKLTNS
Sbjct: 481 RIFELLKLTNS 491

[Close]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 487/491 (99.19%), Postives = 488/491 (99.39%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180
           SLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST 180

Query: 181 FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240
           FQSSNPASPLP VHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
Sbjct: 181 FQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI 240

Query: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300
           SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Sbjct: 241 SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL 300

Query: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM 360
           IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAM
Sbjct: 301 IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM 360

Query: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420
           HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
Sbjct: 361 HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ 420

Query: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480
           RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
Sbjct: 421 RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID 480

Query: 481 RIFELLKLTNS 491
           RIFELLKLTNS
Sbjct: 481 RIFELLKLTNS 491

[Close]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL
Match: A0A6J1I8Y2 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=3661 GN=LOC111472080 PE=3 SV=1)

HSP 1 Score: 924 bits (2388), Expect = 0.0
Identity = 471/492 (95.73%), Postives = 481/492 (97.76%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQ QRSSS+T VSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRVL
Sbjct: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPT-VSTTNLSQSGVLPSSNPVPNSS 180
           SLCSIGYINWDTFLPSLLSSISSAEVS+GQGSQAAPT VSTTNLSQSGVLPSSNPVPNSS
Sbjct: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180

Query: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
           TFQSSNPASPLP +HGISSPAQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
Sbjct: 181 TFQSSNPASPLPSIHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA 300
           ISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Sbjct: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMA 360
           LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAI 420
           MHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SPITYPSVLGEPLHGEDIASAI
Sbjct: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATI 480
           QRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATI
Sbjct: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480

Query: 481 DRIFELLKLTNS 491
           DRIFELLKLTNS
Sbjct: 481 DRIFELLKLTNS 492

[Close]

BLAST of CsGy5G018890 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 606.7 bits (1563), Expect = 1.8e-173
Identity = 323/505 (63.96%), Postives = 386/505 (76.44%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQR+ +  T S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV 
Sbjct: 1   MDQSQRTVA-ATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVH 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  APNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSS 180
           +LC I YINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P         
Sbjct: 121 TLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP--------- 180

Query: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLR 240
              S NP S LP  HGI SP+ S +        S      ++  G     +A+R +  +R
Sbjct: 181 --VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIR 240

Query: 241 NNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP 300
             A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Sbjct: 241 AAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVG-KSWRS 300

Query: 301 DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRD 360
           +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTL++EIHRRRD
Sbjct: 301 EKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRD 360

Query: 361 MMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIA 420
            MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR+SPITYPSVLGEPL+GED+A
Sbjct: 361 AMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLA 420

Query: 421 SAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMIC 480
            +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MIC
Sbjct: 421 MSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIC 480

Query: 481 EATIDRIFELLKLTNSGNYNFFVIL 501
           EA IDRI ELLKLTNSGN  F + L
Sbjct: 481 EAIIDRIVELLKLTNSGNDCFGIDL 485

[Close]

BLAST of CsGy5G018890 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 602.4 bits (1552), Expect = 3.4e-172
Identity = 319/496 (64.31%), Postives = 381/496 (76.81%), Query Frame = 0


Query: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60
           MDQSQR+ +  T S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV 
Sbjct: 1   MDQSQRTVA-ATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVH 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  APNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSS 180
           +LC I YINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P         
Sbjct: 121 TLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP--------- 180

Query: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLR 240
              S NP S LP  HGI SP+ S +        S      ++  G     +A+R +  +R
Sbjct: 181 --VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIR 240

Query: 241 NNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP 300
             A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Sbjct: 241 AAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVG-KSWRS 300

Query: 301 DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRD 360
           +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTL++EIHRRRD
Sbjct: 301 EKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRD 360

Query: 361 MMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIA 420
            MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR+SPITYPSVLGEPL+GED+A
Sbjct: 361 AMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLA 420

Query: 421 SAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMIC 480
            +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MIC
Sbjct: 421 MSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIC 476

Query: 481 EATIDRIFELLKLTNS 492
           EA IDRI ELLKLTNS
Sbjct: 481 EAIIDRIVELLKLTNS 476

The following BLAST results are available for this feature:

BLAST of CsGy5G018890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	2.5e-172	63.96	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy5G018890 vs. NCBI nr


Match Name	Identity	Description
TYK30505.1	98.44	mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo ...	[more]
XP_011655454.1	100.00	mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus] >KAE864...	[more]
XP_008467111.1	99.19	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cu...	[more]
XP_038875594.1	97.96	mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida]	[more]
KAG7016782.1	95.93	Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma s...	[more]

BLAST of CsGy5G018890 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KUT7	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G565790 PE=3 SV=1	[more]
A0A5D3E5C4	98.44	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A5A7TSF1	99.19	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S3CSR7	99.19	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A6J1I8Y2	95.73	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=36...	[more]

BLAST of CsGy5G018890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	1.8e-173	63.96	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	3.4e-172	64.31	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..186
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 1..169 coord: 234..494
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 1..169 coord: 234..494

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G018890.2	CsGy5G018890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus