CsGy5G018840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G018840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	B3 domain-containing protein At2g31420-like
Location	Gy14Chr5: 25218155 .. 25218562 (-)
RNA-Seq Expression	CsGy5G018840
Synteny	CsGy5G018840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

mRNA sequence

ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

Coding sequence (CDS)

ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

Protein sequence

MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC*

Homology

[Close]

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot
Match: Q9SIC7 (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 7   GYEINLVIQKQ-LTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQENKNKR-GINV 66
           GY+  L+I+++ L  TDL KN G LSM+ +KL   DF TE+E+  L E   K KR G+ V
Sbjct: 73  GYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKV 132

Query: 67  MVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEAH 126
            ++D   ++ +V LKKW   +   Y L   WN++++K+  K  + I++WSFR    D + 
Sbjct: 133 FLVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFR----DGSG 192

Query: 127 RLCLALVKLATC 136
           +LC AL     C
Sbjct: 193 KLCFALSSPTRC 200

[Close]

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 9   EINLVIQKQLTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQENKNKR-GINVMVL 68
           +  L+ +K L  TD+N    RLSM    LL  DF T  ES ++ E  N NK+ G+  +++
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILV 284

Query: 69  DDVLEERMVCLKKWKI----GSGE-VYCLMTHWNSMVEKRGLKSGEEIQVWSFR 116
           D    +  V LK+W++    G G   Y L+  WN +VE  GLK G+ I VWSFR
Sbjct: 285 DQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR 338

[Close]

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot
Match: Q9MA32 (B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN=At1g05930 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 4   EMCGYEINLVIQKQLTDTD-LNKNHGRLSMN-TKLLSFDFATEEESELLSEQE-NKNKRG 63
           +M   ++ L+++K L+ TD +   HGR SM+  +L+S DF   EE  +L E   N    G
Sbjct: 170 DMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEERSILEEDTYNDETMG 229

Query: 64  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKD 118
           +  +++D   ++  V LK+W    G+ Y L   WN +V+   LK+G++I +W+FR D
Sbjct: 230 VGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKANKLKAGDDICLWAFRCD 282

[Close]

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.4e-11
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 9   EINLVIQKQLTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQ-ENKNKRGINVMVL 68
           +  L+ +K L  TD+N    RLSM    LL  DF T  ES ++ +  +N  K G+  +++
Sbjct: 212 DAKLIFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDIKNDKKIGVGAILV 271

Query: 69  DDVLEERMVCLKKWKI----GSGE-VYCLMTHWNSMVEKRGLKSGEEIQVWSFR 116
           D   ++  V LK+W++    G G   Y L+  WN +VE  GLK G+ I +WSFR
Sbjct: 272 DQRCKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFR 325

[Close]

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot
Match: Q9FLV7 (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.4e-11
Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 9   EINLVIQKQLTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQ-ENKNKRGINVMVL 68
           +  L+ +K L  TD+N    RLSM    LL  DF T  ES +++E   N NK G+  +++
Sbjct: 215 DAKLIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILV 274

Query: 69  DDVLEERMVCLKKWKI----GSGE-VYCLMTHWNSMVEKRGLKSGEEIQVWSFR 116
           D   ++  V LK+W++    G G   Y L+  WN +VE   LK G+ I +WSFR
Sbjct: 275 DQRCKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of CsGy5G018840 vs. NCBI nr
Match: XP_004142863.3 (B3 domain-containing protein At2g31420 [Cucumis sativus])

HSP 1 Score: 277 bits (708), Expect = 6.17e-94
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG 60
           MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG
Sbjct: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG 60

Query: 61  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED 120
           INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED
Sbjct: 61  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED 120

Query: 121 EAHRLCLALVKLATC 135
           EAHRLCLALVKLATC
Sbjct: 121 EAHRLCLALVKLATC 135

[Close]

BLAST of CsGy5G018840 vs. NCBI nr
Match: KAE8648599.1 (hypothetical protein Csa_008994 [Cucumis sativus])

HSP 1 Score: 266 bits (680), Expect = 1.23e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG 60
           MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG
Sbjct: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG 60

Query: 61  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED 120
           INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED
Sbjct: 61  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED 120

Query: 121 EAHRLCLALV 130
           EAHRLCLALV
Sbjct: 121 EAHRLCLALV 130

[Close]

BLAST of CsGy5G018840 vs. NCBI nr
Match: XP_011655441.2 (putative B3 domain-containing protein At3g24850 [Cucumis sativus] >KAE8648585.1 hypothetical protein Csa_009423 [Cucumis sativus])

HSP 1 Score: 268 bits (686), Expect = 1.12e-88
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN
Sbjct: 133 LEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 192

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA
Sbjct: 193 VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 252

Query: 123 HRLCLALVKLATC 135
           HRLCLALVKLATC
Sbjct: 253 HRLCLALVKLATC 265

[Close]

BLAST of CsGy5G018840 vs. NCBI nr
Match: XP_031741057.1 (B3 domain-containing protein At2g31420-like [Cucumis sativus] >KAE8648584.1 hypothetical protein Csa_009311 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 2.23e-81
Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEINLVIQKQLTDTDLNKNHGRLSMNTK LSFDFATEEES+LLSEQENKNK GIN
Sbjct: 133 LEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 192

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSG VYCLMT WN MVE+RGLKSGEEIQVWSFRKDDEDEA
Sbjct: 193 VMLLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 252

Query: 123 HRLCLALVKLATC 135
           HRLCLALVKLATC
Sbjct: 253 HRLCLALVKLATC 265

[Close]

BLAST of CsGy5G018840 vs. NCBI nr
Match: KAA0046407.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYK14654.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (625), Expect = 1.34e-79
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEI LVIQKQLTDTDLNKNHGRLSMN K LSFDFATEEESELLSEQENKNK+GIN
Sbjct: 119 LEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNKKQLSFDFATEEESELLSEQENKNKKGIN 178

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSGEVYCLMT WN MVEKRG +SGEEIQVWSFRKDDE EA
Sbjct: 179 VMILDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEKRGFESGEEIQVWSFRKDDEYEA 238

Query: 123 HRLCLALVKLATC 135
           HRLC ALVKLATC
Sbjct: 239 HRLCFALVKLATC 251

[Close]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL
Match: A0A0A0KPD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 5.36e-88
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRG 60
           MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTK LSFDFATEEES+LLSEQENKNK G
Sbjct: 1   MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 60

Query: 61  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDED 120
           INVM+LDDVLEERM+CLKKWKIGSGEVYCLMT WN MVE+RGLKSGEEIQVWSFRKDDED
Sbjct: 61  INVMLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDED 120

Query: 121 EAHRLCLALVKLATC 135
           EAHRLCLALVKLATC
Sbjct: 121 EAHRLCLALVKLATC 135

[Close]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL
Match: A0A0A0KP87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 5.36e-82
Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEINLVIQKQLTDTDLNKNHGRLSMNTK LSFDFATEEES+LLSEQENKNK GIN
Sbjct: 133 LEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 192

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSG VYCLMT WN MVE+RGLKSGEEIQVWSFRKDDEDEA
Sbjct: 193 VMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 252

Query: 123 HRLCLALVKLATC 135
           HRLCLALVKLATC
Sbjct: 253 HRLCLALVKLATC 265

[Close]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL
Match: A0A5A7TWX2 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00300 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 6.48e-80
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEI LVIQKQLTDTDLNKNHGRLSMN K LSFDFATEEESELLSEQENKNK+GIN
Sbjct: 119 LEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNKKQLSFDFATEEESELLSEQENKNKKGIN 178

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSGEVYCLMT WN MVEKRG +SGEEIQVWSFRKDDE EA
Sbjct: 179 VMILDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEKRGFESGEEIQVWSFRKDDEYEA 238

Query: 123 HRLCLALVKLATC 135
           HRLC ALVKLATC
Sbjct: 239 HRLCFALVKLATC 251

[Close]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL
Match: A0A5A7TY94 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00280 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 3.20e-79
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEI LVIQKQLTDTDLNKNHGRLSMNTK LSFDFATEEE++LLSEQENKNKRGIN
Sbjct: 136 LEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGIN 195

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSGEVYCLMT WN MVE+RG K GEEIQVWSFRKDDE EA
Sbjct: 196 VMMLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYEA 255

Query: 123 HRLCLALVKLATC 135
           HRLC ALVKLATC
Sbjct: 256 HRLCFALVKLATC 268

[Close]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL
Match: A0A1S4E600 (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 3.20e-79
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGIN 62
           LEM GYEI LVIQKQLTDTDLNKNHGRLSMNTK LSFDFATEEE++LLSEQENKNKRGIN
Sbjct: 136 LEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGIN 195

Query: 63  VMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 122
           VM+LDDVLEERM+CLKKWKIGSGEVYCLMT WN MVE+RG K GEEIQVWSFRKDDE EA
Sbjct: 196 VMMLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYEA 255

Query: 123 HRLCLALVKLATC 135
           HRLC ALVKLATC
Sbjct: 256 HRLCFALVKLATC 268

[Close]

BLAST of CsGy5G018840 vs. TAIR 10
Match: AT2G31420.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 84.3 bits (207), Expect = 8.0e-17
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 7   GYEINLVIQKQ-LTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQENKNKR-GINV 66
           GY+  L+I+++ L  TDL KN G LSM+ +KL   DF TE+E+  L E   K KR G+ V
Sbjct: 73  GYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKV 132

Query: 67  MVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEAH 126
            ++D   ++ +V LKKW   +   Y L   WN++++K+  K  + I++WSFR    D + 
Sbjct: 133 FLVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFR----DGSG 192

Query: 127 RLCLALVKLATC 136
           +LC AL     C
Sbjct: 193 KLCFALSSPTRC 200

[Close]

BLAST of CsGy5G018840 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 9   EINLVIQKQLTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQENKNKR-GINVMVL 68
           +  L+ +K L  TD+N    RLSM    LL  DF T  ES ++ E  N NK+ G+  +++
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILV 284

Query: 69  DDVLEERMVCLKKWKI----GSGE-VYCLMTHWNSMVEKRGLKSGEEIQVWSFR 116
           D    +  V LK+W++    G G   Y L+  WN +VE  GLK G+ I VWSFR
Sbjct: 285 DQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR 338

[Close]

BLAST of CsGy5G018840 vs. TAIR 10
Match: AT1G05930.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 4   EMCGYEINLVIQKQLTDTD-LNKNHGRLSMN-TKLLSFDFATEEESELLSEQE-NKNKRG 63
           +M   ++ L+++K L+ TD +   HGR SM+  +L+S DF   EE  +L E   N    G
Sbjct: 170 DMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEERSILEEDTYNDETMG 229

Query: 64  INVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKD 118
           +  +++D   ++  V LK+W    G+ Y L   WN +V+   LK+G++I +W+FR D
Sbjct: 230 VGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKANKLKAGDDICLWAFRCD 282

[Close]

BLAST of CsGy5G018840 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 9   EINLVIQKQLTDTDLNKNHGRLSMN-TKLLSFDFATEEESELLSEQ-ENKNKRGINVMVL 68
           +  L+ +K L  TD+N    RLSM    LL  DF T  ES +++E   N NK G+  +++
Sbjct: 215 DAKLIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILV 274

Query: 69  DDVLEERMVCLKKWKI----GSGE-VYCLMTHWNSMVEKRGLKSGEEIQVWSFR 116
           D   ++  V LK+W++    G G   Y L+  WN +VE   LK G+ I +WSFR
Sbjct: 275 DQRCKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of CsGy5G018840 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-11
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 12  LVIQKQLTDTDLNKNHGRLS--MNTKLLSFDFATEEESELLSEQE--NKNKRGINVMVLD 71
           L+I+K L   D++    RLS  +NT ++  DF T +ES L+ E E  N+   G+   ++D
Sbjct: 182 LIIEKNLDSNDVDPRQNRLSIPINT-VIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVD 241

Query: 72  DVLEERMVCLKKW--KIGSGEVY---CLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEA 131
              ++  +  K+W     SG  Y    L   W+++VE  GLK G++I +WSFR +D    
Sbjct: 242 QRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSND---- 301

The following BLAST results are available for this feature:

BLAST of CsGy5G018840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIC7	1.1e-15	38.64	B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31...	[more]
Q9LRX6	1.5e-12	39.47	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9MA32	2.9e-11	34.19	B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	6.4e-11	36.84	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FLV7	8.4e-11	37.72	B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24...	[more]

BLAST of CsGy5G018840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142863.3	6.17e-94	100.00	B3 domain-containing protein At2g31420 [Cucumis sativus]	[more]
KAE8648599.1	1.23e-89	100.00	hypothetical protein Csa_008994 [Cucumis sativus]	[more]
XP_011655441.2	1.12e-88	99.25	putative B3 domain-containing protein At3g24850 [Cucumis sativus] >KAE8648585.1 ...	[more]
XP_031741057.1	2.23e-81	92.48	B3 domain-containing protein At2g31420-like [Cucumis sativus] >KAE8648584.1 hypo...	[more]
KAA0046407.1	1.34e-79	90.23	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYK14654.1 put...	[more]

BLAST of CsGy5G018840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD7	5.36e-88	94.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G550750 PE=4 SV=1	[more]
A0A0A0KP87	5.36e-82	92.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1	[more]
A0A5A7TWX2	6.48e-80	90.23	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TY94	3.20e-79	89.47	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S4E600	3.20e-79	89.47	putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CsGy5G018840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31420.1	8.0e-17	38.64	Domain of unknown function (DUF313)	[more]
AT3G24850.1	1.1e-13	39.47	Domain of unknown function (DUF313)	[more]
AT1G05930.1	2.0e-12	34.19	Domain of unknown function (DUF313)	[more]
AT5G24050.1	5.9e-12	37.72	Domain of unknown function (DUF313)	[more]
AT1G05920.1	3.0e-11	35.16	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 5..100 e-value: 1.9E-19 score: 70.0
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 4..132
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 6..129 e-value: 2.5E-14 score: 54.7
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 11..117
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 4..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G018840.1	CsGy5G018840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding