CsGy5G018675 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G018675
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 25072464 .. 25072679 (-)
RNA-Seq ExpressionCsGy5G018675
SyntenyCsGy5G018675
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCTTGGTGTCCAAATTTCAAACTCAAACGGCTTAGGTTCGGTGCTTCAAGACCACTTTGGACAAGTTGATTTGGTTGGATATAAGTTTGTCCTCCGTTGCAGGGAGGTCAGGCTTCTTGAAGCGATGACCATATGTTTTGGTCTTCAGAATATTTCCTCAATACATATCTTATTTCAAATATTTTTGTTGAGTATGATTGCTTGTAAGTAA

mRNA sequence

ATGTCGCTTGGTGTCCAAATTTCAAACTCAAACGGCTTAGGTTCGGTGCTTCAAGACCACTTTGGACAAGTTGATTTGGTTGGATATAAGTTTGTCCTCCGTTGCAGGGAGGTCAGGCTTCTTGAAGCGATGACCATATGTTTTGGTCTTCAGAATATTTCCTCAATACATATCTTATTTCAAATATTTTTGTTGAGTATGATTGCTTGTAAGTAA

Coding sequence (CDS)

ATGTCGCTTGGTGTCCAAATTTCAAACTCAAACGGCTTAGGTTCGGTGCTTCAAGACCACTTTGGACAAGTTGATTTGGTTGGATATAAGTTTGTCCTCCGTTGCAGGGAGGTCAGGCTTCTTGAAGCGATGACCATATGTTTTGGTCTTCAGAATATTTCCTCAATACATATCTTATTTCAAATATTTTTGTTGAGTATGATTGCTTGTAAGTAA

Protein sequence

MSLGVQISNSNGLGSVLQDHFGQVDLVGYKFVLRCREVRLLEAMTICFGLQNISSIHILFQIFLLSMIACK*
Homology
[Close]
BLAST of CsGy5G018675 vs. NCBI nr
Match: KAE8648586.1 (hypothetical protein Csa_008875 [Cucumis sativus])

HSP 1 Score: 140 bits (353), Expect = 2.28e-40
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MSLGVQISNSNGLGSVLQDHFGQVDLVGYKFVLRCREVRLLEAMTICFGLQNISSIHILF 60
          MSLGVQISNSNGLGSVLQDHFGQVDLVGYKFVLRCREVRLLEAMTICFGLQNISSIHILF
Sbjct: 1  MSLGVQISNSNGLGSVLQDHFGQVDLVGYKFVLRCREVRLLEAMTICFGLQNISSIHILF 60

Query: 61 QIFLLSMIACK 71
          QIFLLSMIACK
Sbjct: 61 QIFLLSMIACK 71

[Close]
BLAST of CsGy5G018675 vs. NCBI nr
Match: XP_038886170.1 (uncharacterized protein LOC120076417 [Benincasa hispida])

HSP 1 Score: 56.2 bits (134), Expect = 2.25e-07
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 12  GLGSVLQDHFGQVDLVGYKFVLRCREVRLLEAMTICFGLQNISSIHI 58
           GLG V  DH  +V + G KFVLRC++V +LEA+ ICFGL+ +SSI I
Sbjct: 93  GLGWVFLDHLYRVCMAGLKFVLRCQKVNILEAIAICFGLEILSSIDI 139

The following BLAST results are available for this feature:
BLAST of CsGy5G018675 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G018675 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648586.12.28e-40100.00hypothetical protein Csa_008875 [Cucumis sativus][more]
XP_038886170.12.25e-0757.45uncharacterized protein LOC120076417 [Benincasa hispida][more]
BLAST of CsGy5G018675 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy5G018675 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G018675.1CsGy5G018675.1mRNA