CsGy5G017880 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G017880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	LOB domain-containing protein
Location	Gy14Chr5: 24070854 .. 24073484 (+)
RNA-Seq Expression	CsGy5G017880
Synteny	CsGy5G017880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAAAAGCTAGGTAAACCCTAATTCTAACTTTTTCATACTTAATTAATTTTATGATATGTATGTATATATATTATATATATTATGCTCAACAAGAACTTTGTAAAGATCTCCTTGATGGTTTTATTTTTTCCCTTTTGAGATTTTTTCCTTGGAGTCACTTAATTAAATTATAATTACTTCATTGAAATTATTTTGATAATTTGTACTTGTCCTGCCTGTTTACCTAAAAAAACTATTAAATTGTAATTAAGATGAAACACAGATCCTGCAGAATATGTGTTTATTAAATACTACGATTTATAATGTTTTTTCTTTTTTTCTTTTTTCTTTTCTTTTTATAAAAAAACTAAGAATTCATAATGTTTTAGTACAAAGGAAGGTGTGGGATTTTTAATGTTTCAGCTGAAACAGTAATGTGTGGTATGTTTTGTACAGTGAAGAGAAATAAAAACTAGACAATATAATTTAAATTCCACAAACAAAAAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAGTAGGGTGTGTCTAAGAACAATTTAAAGTGTATTGTATTTGTGATGTAATATTTAATAAATTATGTACTACTAAATGTAGCACAATAGGAATAGACCTATCTATTTACTATTGTAACATTATAAATATACAGCAAAAGAAAATGAAATTAATTTACATTTTCTATAAAGTTTTATCTCAAGATTAGTTGACAAATAAGAAGATTAATTTCATGCATCTTATAAAAATTGTGATATATCGTAAGTATCTAATTGTTATCTGTAAATGTGTAACATGATGAAGATATATAAGGCAAAAACACTTTTAAGAAACAGAGAAGAAAATCAATAAGGGAAATCCACTCATTCGAGTTAGAAAGCACTTTTTTCTCTATCTTGTATACTCTCACACGCAAATAAAATATTTATAAAAATAAAAATAAATAGATTTTTATTTAAGTGTCTAGTGATGATATTATATTAAAAATGGATAAAAATTTATCAGCGTTTATTATCGATAGAATATGTAATTTTATTATATTTTATAAGTATTCTTGTCATTCATAATATTTTCCCATTTTTTTTATGTATATATATATATGAGATAAATTCTAGATAGAAAAAAGATTGAAACTATTTTTAAAAAAAACTTAGGTGCGTCTCGAAGAATTTAATAGATCATTTTACTATATTTTGTAAATAATTTTTTTTATATTATCGCACGATTCCTTATATATAAATATAAATTAAGTAAAAGACAATTATAAAGCAATTAAATTAAATATAGATTGACACCAAGTCCCATTAAAAACCTAATTTAATTCTTTGAAAAGTAATCTTTATTAGTTTAGAAAACCCAATTTAACAATGAGATTATTGGTGTCTCATTCCCCAACCAATTTGATATGGAATTGTACAGTGTAAAAAGGGTTAATGCAAAAGCAAACCCCATTTGTGTACTTCAGTAATTTTAAAAAGGATTTGGTTTAAAAAAGTGGAGAAGGGGATGAATGAACCCTTCCTTATTTGCATACATTTCTACCCAAAATATTATTCATATGCCACAAAAGATAAAGCTTTTTAGATTTATGTTAGCTACTTTAGGTACAGAAGTTATTCCATCATTAAAAAAAGTTATATTATAATTCACTATTGAAAGCCCTTACCAATTGAAAAAAAAAATCATATACAAACTATACTAAGAACTACATTATTTTTAGGTGTTTTTTTTAAAAAAAAGAATAAAATTAACAAACTATTTATACTGCATGAAATAAAACTACTAAAAGTCAAATTTTATTAAAGTTGGTTTTCATGTGAACGGTAAATATATATCTTGTCAAATATTACATTTTTTACAATTTTCATAATTTTTTTTAAATGCTTAATTCTATTACAAGAACAAAAGAATAAAATGATATTGGTGGATATTCTCCCACATAATATATATTGTTTGGTTTTGTTGATATAGAAGGAAAAAAGAAAGAAAAAGAATATGGCTTCTTCAAGCTACACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTCCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTCGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAAGTTCAGCCCCATCAGCGCGAGGATGCTGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTCGACGCTACAAATGCTGATTTGGTACGATATGCGAGCGGGAGCGCCCGGCCGCCCTCGCAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTACTCGCCACCATTCTGGTCTGTCTTTTATTTCTCCTTTGAGTAGTAGTCATCATGATAGTACTTATTGCCATGATAAAGAGGAAGGCAATTGAAAATCTTGTATGAATTTGTGAGAGATTTTTTTTTCTTCTTTTTCTTTGGGGTTTTCCATTAATTTGTTCTGCCAATCCCCTTGTTCCTCTTATGTTCCAAGCTTTTTTTTATGGGTATATTTTTCTCTCTTGATCTATAACAGTGGT

mRNA sequence

ATCAAAAAGCTAGAAGGAAAAAAGAAAGAAAAAGAATATGGCTTCTTCAAGCTACACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTCCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTCGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAAGTTCAGCCCCATCAGCGCGAGGATGCTGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTCGACGCTACAAATGCTGATTTGGTACGATATGCGAGCGGGAGCGCCCGGCCGCCCTCGCAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTACTCGCCACCATTCTGGTCTGTCTTTTATTTCTCCTTTGAGTAGTAGTCATCATGATAGTACTTATTGCCATGATAAAGAGGAAGGCAATTGAAAATCTTGTATGAATTTGTGAGAGATTTTTTTTTCTTCTTTTTCTTTGGGGTTTTCCATTAATTTGTTCTGCCAATCCCCTTGTTCCTCTTATGTTCCAAGCTTTTTTTTATGGGTATATTTTTCTCTCTTGATCTATAACAGTGGT

Coding sequence (CDS)

ATGGCTTCTTCAAGCTACACAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCTGATTGCATATTTGCACCCTATTTCCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTCGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAAGTTCAGCCCCATCAGCGCGAGGATGCTGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGTATGAAAGACCCTGTCTACGGCTGCGTTGGGGCCATCTCCGTTTTGCAACGACAAGTTATTCGTCTCCAAAAAGAGCTCGACGCTACAAATGCTGATTTGGTACGATATGCGAGCGGGAGCGCCCGGCCGCCCTCGCAATATGGAAGGAGAGCAACAACTGCCTCGGTGAGTACTCGCCACCATTCTGGTCTGTCTTTTATTTCTCCTTTGAGTAGTAGTCATCATGATAGTACTTATTGCCATGATAAAGAGGAAGGCAATTGA

Protein sequence

MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN*

Homology

[Close]

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-53
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 4   SSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQR 63
           S+YTNSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG-SARPPS 123
           EDAVNSLAYEAEAR+KDPVYGCVGAISVLQRQV+RLQ+EL+ TNADL+RYA        S
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

Query: 124 QYGRR 128
            YG R
Sbjct: 153 AYGGR 157

[Close]

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-42
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSS TNSPCAACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLLNE+ P
Sbjct: 1   MASSS-TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYAS 116
            QREDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y S
Sbjct: 61  SQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQS 114

[Close]

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-39
Identity = 84/152 (55.26%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSS   SPCAACKFLRRKC  +C+FAPYFPP++P KFA VHK+FGASNV+KLLNE+  
Sbjct: 1   MASSS---SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELAS 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSAR- 120
           +QREDAVNSL YEAEAR++DPVYGCVG IS+LQ ++ ++  +L+    +L  Y    A  
Sbjct: 61  NQREDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAML 120

Query: 121 ----------PPSQYGRRATTASVSTRHHSGL 142
                     PP      +++ASV T+HH  L
Sbjct: 121 PILQPHFMSLPPQPQRPSSSSASVLTQHHHNL 149

[Close]

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.0e-39
Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 7   TNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           T SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 67  VNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPS 123
           VNSLAYEA+ R++DPVYGCVG IS+LQ  + +LQ++L     +L +Y + +A   S
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

[Close]

BLAST of CsGy5G017880 vs. NCBI nr
Match: XP_011655399.1 (LOB domain-containing protein 25 [Cucumis sativus])

HSP 1 Score: 330 bits (846), Expect = 4.92e-114
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVSTRHHSGLSF+SPLSSSHHDSTYCHDKEEGN
Sbjct: 121 PSQYGRRATTASVSTRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]

BLAST of CsGy5G017880 vs. NCBI nr
Match: KAA0037575.1 (LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB domain-containing protein 25 [Cucumis melo var. makuwa])

HSP 1 Score: 319 bits (817), Expect = 1.35e-109
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVS-TRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVS TRHHSGLSF+SPLSS+HHD  YCH+KEEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]

BLAST of CsGy5G017880 vs. NCBI nr
Match: XP_008458802.1 (PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDICTED: LOB domain-containing protein 25 [Cucumis melo])

HSP 1 Score: 317 bits (812), Expect = 7.81e-109
Identity = 158/165 (95.76%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVS-TRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVS TRHHSGLSF+SPLSS+HHD  YCH+ EEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]

BLAST of CsGy5G017880 vs. NCBI nr
Match: XP_038890699.1 (LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 310 bits (794), Expect = 4.05e-106
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSY+NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG ARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARP 120

Query: 121 PSQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQ+GRRA TAS+ TRHHSGLSF+SPLSS+ HD++YCHDKEEGN
Sbjct: 121 PSQFGRRAATASI-TRHHSGLSFLSPLSSNDHDASYCHDKEEGN 163

[Close]

BLAST of CsGy5G017880 vs. NCBI nr
Match: KAE8648553.1 (hypothetical protein Csa_009000 [Cucumis sativus])

HSP 1 Score: 266 bits (680), Expect = 4.28e-89
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTAS 132
           PSQYGRRATTAS
Sbjct: 121 PSQYGRRATTAS 132

[Close]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL
Match: A0A0A0KSE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 2.38e-114
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVSTRHHSGLSF+SPLSSSHHDSTYCHDKEEGN
Sbjct: 121 PSQYGRRATTASVSTRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL
Match: A0A5A7T800 (LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00190 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 6.53e-110
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVS-TRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVS TRHHSGLSF+SPLSS+HHD  YCH+KEEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL
Match: A0A1S3C8P8 (LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV=1)

HSP 1 Score: 317 bits (812), Expect = 3.78e-109
Identity = 158/165 (95.76%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60
           MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARP 120

Query: 121 PSQYGRRATTASVS-TRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
           PSQYGRRATTASVS TRHHSGLSF+SPLSS+HHD  YCH+ EEGN
Sbjct: 121 PSQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL
Match: A0A6J1JRR4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111487747 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 2.40e-87
Identity = 134/163 (82.21%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61
           +SSSY+NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 3   SSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122

Query: 122 SQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
             YGRRA   S       G+ FISPL+S+     YCHDKEE N
Sbjct: 123 --YGRRAAAQS-------GVCFISPLNSNDRHDPYCHDKEEEN 155

[Close]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL
Match: A0A6J1E293 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430146 PE=3 SV=1)

HSP 1 Score: 256 bits (653), Expect = 4.64e-85
Identity = 131/163 (80.37%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61
           +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 3   SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122

Query: 122 SQYGRRATTASVSTRHHSGLSFISPLSSSHHDSTYCHDKEEGN 164
             YGRRA   S       G+ FISPL+++     YC DKEE N
Sbjct: 123 --YGRRAAAQS-------GVCFISPLNTNDRHDPYCRDKEEQN 155

[Close]

BLAST of CsGy5G017880 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 4   SSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQR 63
           S+YTNSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASG-SARPPS 123
           EDAVNSLAYEAEAR+KDPVYGCVGAISVLQRQV+RLQ+EL+ TNADL+RYA        S
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

Query: 124 QYGRR 128
            YG R
Sbjct: 153 AYGGR 157

[Close]

BLAST of CsGy5G017880 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of CsGy5G017880 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of CsGy5G017880 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of CsGy5G017880 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MASSSYT-NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQ 60
           MASSS + NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRY 114
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:

BLAST of CsGy5G017880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.7e-53	80.80	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	2.5e-49	85.09	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	2.9e-42	70.43	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q9FKZ3	1.8e-39	55.26	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
Q32SG3	4.0e-39	62.93	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of CsGy5G017880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655399.1	4.92e-114	99.39	LOB domain-containing protein 25 [Cucumis sativus]	[more]
KAA0037575.1	1.35e-109	96.36	LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB doma...	[more]
XP_008458802.1	7.81e-109	95.76	PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDI...	[more]
XP_038890699.1	4.05e-106	93.29	LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB do...	[more]
KAE8648553.1	4.28e-89	100.00	hypothetical protein Csa_009000 [Cucumis sativus]	[more]

BLAST of CsGy5G017880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSE8	2.38e-114	99.39	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV...	[more]
A0A5A7T800	6.53e-110	96.36	LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C8P8	3.78e-109	95.76	LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV...	[more]
A0A6J1JRR4	2.40e-87	82.21	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148774...	[more]
A0A6J1E293	4.64e-85	80.37	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]

BLAST of CsGy5G017880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.2e-54	80.80	LOB domain-containing protein 25	[more]
AT5G63090.2	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	1.8e-50	85.09	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..164
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..130
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..130
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 9.3E-42 score: 141.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.540741

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G017880.2	CsGy5G017880.2	mRNA