Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGTCAATTCGCTCTCCTCGCCCTTCTCTTCTCCGCCGCCGTCGTCGGCATTGTCTCTGCCGCCGAAGCCCCCGCCACCTCCCCCGCCTCCTCCCCCGCCTCCTCCCCTGCTTCCTCCCCCAAGGCCGCTGACGTTGAACCCTCCGATGGCGCAAAAACTCCCGCAGCTGCTCCTTCCAAGTCTCCCGCCGCAGCCGCTGACGCCCCGATCGCTGCCACTCCTTCCGCCGCCGGTGCTCCCAAAGGAGCTGCTTCTGCCCCTTCAGCTAAGGCTGGAGCCCCTGAAGCTGACACCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGAAGCCGATGTGTCATCTCCACCTTCCCCAACTGGACCTGCTGCCGGACCTACAAGCGATGCGGTTGCTGATGCACCAGCTGATTCATCAGCTGATTCACCAGCTGATACACCCTCAGATTCTCCGGCCAATGGTGGTTCTTTGGTGAAAGTGTCTGTTGCGGCCGTTGCTGGGATTTCGGGCATTGTTGGATTGTTTGTGTTCTAA
mRNA sequence
ATGGCCCGTCAATTCGCTCTCCTCGCCCTTCTCTTCTCCGCCGCCGTCGTCGGCATTGTCTCTGCCGCCGAAGCCCCCGCCACCTCCCCCGCCTCCTCCCCCGCCTCCTCCCCTGCTTCCTCCCCCAAGGCCGCTGACGTTGAACCCTCCGATGGCGCAAAAACTCCCGCAGCTGCTCCTTCCAAGTCTCCCGCCGCAGCCGCTGACGCCCCGATCGCTGCCACTCCTTCCGCCGCCGGTGCTCCCAAAGGAGCTGCTTCTGCCCCTTCAGCTAAGGCTGGAGCCCCTGAAGCTGACACCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGAAGCCGATGTGTCATCTCCACCTTCCCCAACTGGACCTGCTGCCGGACCTACAAGCGATGCGGTTGCTGATGCACCAGCTGATTCATCAGCTGATTCACCAGCTGATACACCCTCAGATTCTCCGGCCAATGGTGGTTCTTTGGTGAAAGTGTCTGTTGCGGCCGTTGCTGGGATTTCGGGCATTGTTGGATTGTTTGTGTTCTAA
Coding sequence (CDS)
ATGGCCCGTCAATTCGCTCTCCTCGCCCTTCTCTTCTCCGCCGCCGTCGTCGGCATTGTCTCTGCCGCCGAAGCCCCCGCCACCTCCCCCGCCTCCTCCCCCGCCTCCTCCCCTGCTTCCTCCCCCAAGGCCGCTGACGTTGAACCCTCCGATGGCGCAAAAACTCCCGCAGCTGCTCCTTCCAAGTCTCCCGCCGCAGCCGCTGACGCCCCGATCGCTGCCACTCCTTCCGCCGCCGGTGCTCCCAAAGGAGCTGCTTCTGCCCCTTCAGCTAAGGCTGGAGCCCCTGAAGCTGACACCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGAAGCCGATGTGTCATCTCCACCTTCCCCAACTGGACCTGCTGCCGGACCTACAAGCGATGCGGTTGCTGATGCACCAGCTGATTCATCAGCTGATTCACCAGCTGATACACCCTCAGATTCTCCGGCCAATGGTGGTTCTTTGGTGAAAGTGTCTGTTGCGGCCGTTGCTGGGATTTCGGGCATTGTTGGATTGTTTGTGTTCTAA
Protein sequence
MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAPEADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF*
Homology
BLAST of CsGy5G017650 vs. NCBI nr
Match:
XP_031741751.1 (lysine-rich arabinogalactan protein 17 [Cucumis sativus])
HSP 1 Score: 306 bits (783), Expect = 1.75e-103
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP
Sbjct: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
Query: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA
Sbjct: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
Query: 121 PAGAPEADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAA 180
PAGAPEADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAA
Sbjct: 121 PAGAPEADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAA 180
Query: 181 VAGISGIVGLFVF 193
VAGISGIVGLFVF
Sbjct: 181 VAGISGIVGLFVF 193
BLAST of CsGy5G017650 vs. NCBI nr
Match:
XP_008458926.1 (PREDICTED: skin secretory protein xP2 [Cucumis melo])
HSP 1 Score: 239 bits (611), Expect = 2.25e-77
Identity = 163/199 (81.91%), Postives = 172/199 (86.43%), Query Frame = 0
Query: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
MARQF LLALLFSAAV+GIVSAAEAPA SPASSPASSP KAAD+EPSD KTPAAAP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSP----KAADLEPSDDGKTPAAAP 60
Query: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
SK+PAAAADAPIA TPSAAGAPKGAASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVA
Sbjct: 61 SKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVA 120
Query: 121 PAGAP------EADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLV 180
PAGAP +A+VSSPPSPTGPAAGP SDA ADAPADS ADSPA + GGSLV
Sbjct: 121 PAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPS-------GGSLV 180
Query: 181 KVSVAAVAGISGIVGLFVF 193
KVSVAAVAGISG+VGLFVF
Sbjct: 181 KVSVAAVAGISGVVGLFVF 188
BLAST of CsGy5G017650 vs. NCBI nr
Match:
TYK09358.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])
HSP 1 Score: 188 bits (478), Expect = 1.13e-57
Identity = 126/157 (80.25%), Postives = 135/157 (85.99%), Query Frame = 0
Query: 43 KAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPV 102
+AAD+EPSD KTPAAAPSK+PAAA DAPIA TPSAAGAPKGAASAP+AK GAPEAD+PV
Sbjct: 3 QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62
Query: 103 AGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGPAAGPTSDAVADAPADSSA 162
AGGPASSPAGDESSSTVAPAGAP +A+VSSPPSPTGPAAGP SDA ADAPADS A
Sbjct: 63 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 122
Query: 163 DSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 193
DSPA + GGSLVKVSVAAVAGISG+VGLFVF
Sbjct: 123 DSPAPS-------GGSLVKVSVAAVAGISGVVGLFVF 152
BLAST of CsGy5G017650 vs. NCBI nr
Match:
XP_038889219.1 (classical arabinogalactan protein 11 [Benincasa hispida])
HSP 1 Score: 166 bits (419), Expect = 2.21e-48
Identity = 131/195 (67.18%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
MARQ LLALLF+A VVGIVSAAEAP SPASSPA A D SD KTPAAAP
Sbjct: 1 MARQLVLLALLFTA-VVGIVSAAEAPTASPASSPA--------ADDHAVSDAEKTPAAAP 60
Query: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
SKSPAAA APIAATPSAAGAP+GAAS+P A EA++P AGGPAS PAGDESSS +
Sbjct: 61 SKSPAAATTAPIAATPSAAGAPEGAASSPQA-----EAESPAAGGPASGPAGDESSSD-S 120
Query: 121 PAGAPE--ADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSV 180
PAGAPE ADVSSPPSPTGPAAGP +D +++AD+PAD+P+D+ A+GGS +KVSV
Sbjct: 121 PAGAPESDADVSSPPSPTGPAAGPADGPASDG--EAAADAPADSPTDA-ASGGSFLKVSV 177
Query: 181 AAVAGISGIVGLFVF 193
AAVAGIS + G F F
Sbjct: 181 AAVAGISAVAGFFAF 177
BLAST of CsGy5G017650 vs. NCBI nr
Match:
KAA0037616.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])
HSP 1 Score: 136 bits (343), Expect = 9.33e-38
Identity = 91/115 (79.13%), Postives = 97/115 (84.35%), Query Frame = 0
Query: 85 AASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGP 144
AASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVAPAGAP +A+VSSPPSPTGP
Sbjct: 4 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63
Query: 145 AAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 193
AAGP SDA ADAPADS ADSPA + GGSLVKVSVAAVAGISG+VGLFVF
Sbjct: 64 AAGPASDAAADAPADSPADSPAPS-------GGSLVKVSVAAVAGISGVVGLFVF 111
BLAST of CsGy5G017650 vs. ExPASy TrEMBL
Match:
A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1)
HSP 1 Score: 259 bits (662), Expect = 1.32e-84
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 31 ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS 90
ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS
Sbjct: 84 ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS 143
Query: 91 AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAPEADVSSPPSPTGPAAGPTSDAVADA 150
AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAPEADVSSPPSPTGPAAGPTSDAVADA
Sbjct: 144 AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAPEADVSSPPSPTGPAAGPTSDAVADA 203
Query: 151 PADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 193
PADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF
Sbjct: 204 PADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 246
BLAST of CsGy5G017650 vs. ExPASy TrEMBL
Match:
A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)
HSP 1 Score: 239 bits (611), Expect = 1.09e-77
Identity = 163/199 (81.91%), Postives = 172/199 (86.43%), Query Frame = 0
Query: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
MARQF LLALLFSAAV+GIVSAAEAPA SPASSPASSP KAAD+EPSD KTPAAAP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSP----KAADLEPSDDGKTPAAAP 60
Query: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
SK+PAAAADAPIA TPSAAGAPKGAASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVA
Sbjct: 61 SKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVA 120
Query: 121 PAGAP------EADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLV 180
PAGAP +A+VSSPPSPTGPAAGP SDA ADAPADS ADSPA + GGSLV
Sbjct: 121 PAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPS-------GGSLV 180
Query: 181 KVSVAAVAGISGIVGLFVF 193
KVSVAAVAGISG+VGLFVF
Sbjct: 181 KVSVAAVAGISGVVGLFVF 188
BLAST of CsGy5G017650 vs. ExPASy TrEMBL
Match:
A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)
HSP 1 Score: 188 bits (478), Expect = 5.48e-58
Identity = 126/157 (80.25%), Postives = 135/157 (85.99%), Query Frame = 0
Query: 43 KAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPV 102
+AAD+EPSD KTPAAAPSK+PAAA DAPIA TPSAAGAPKGAASAP+AK GAPEAD+PV
Sbjct: 3 QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62
Query: 103 AGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGPAAGPTSDAVADAPADSSA 162
AGGPASSPAGDESSSTVAPAGAP +A+VSSPPSPTGPAAGP SDA ADAPADS A
Sbjct: 63 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 122
Query: 163 DSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 193
DSPA + GGSLVKVSVAAVAGISG+VGLFVF
Sbjct: 123 DSPAPS-------GGSLVKVSVAAVAGISGVVGLFVF 152
BLAST of CsGy5G017650 vs. ExPASy TrEMBL
Match:
A0A5A7T636 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002770 PE=4 SV=1)
HSP 1 Score: 136 bits (343), Expect = 4.52e-38
Identity = 91/115 (79.13%), Postives = 97/115 (84.35%), Query Frame = 0
Query: 85 AASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGP 144
AASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVAPAGAP +A+VSSPPSPTGP
Sbjct: 4 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63
Query: 145 AAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 193
AAGP SDA ADAPADS ADSPA + GGSLVKVSVAAVAGISG+VGLFVF
Sbjct: 64 AAGPASDAAADAPADSPADSPAPS-------GGSLVKVSVAAVAGISGVVGLFVF 111
BLAST of CsGy5G017650 vs. ExPASy TrEMBL
Match:
A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1)
HSP 1 Score: 114 bits (285), Expect = 2.91e-28
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0
Query: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
MARQ +LALLF AAVVG+VSAA+AP+T+PA++P+ S ++ K + S A PAAAP
Sbjct: 1 MARQLVVLALLF-AAVVGVVSAAKAPSTAPAAAPSKSNSTEAKDSPASKSP-ASAPAAAP 60
Query: 61 SKS-----PAAA-ADAPIAATPSAAGAPKGAASAPSAKAG-APEADTPVAGGPASSPAGD 120
SKS PAAA +DAP +ATP AA APKGAAS+P+A A +A++ AG PASSPA D
Sbjct: 61 SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGTKAESAPAGSPASSPAAD 120
Query: 121 ESSSTVAPAGAPEA-DVSSPPSPTGPAA-GPTSDAVADAPADSSADSPA-DTPSDSPANG 180
+S +PA +P+A DVSSPPSP+GPAA +DA ADAPA A PA D P+D+PA+G
Sbjct: 121 GPASDESPAASPDAADVSSPPSPSGPAADSDAADADADAPA---AGGPAGDAPTDAPASG 180
Query: 181 GSLVKVSVAAVAGISGIVGLFVF 193
S VK S AA+AG+ + G F F
Sbjct: 181 ASFVKASAAAIAGVCAVAGFFAF 197
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_031741751.1 | 1.75e-103 | 100.00 | lysine-rich arabinogalactan protein 17 [Cucumis sativus] | [more] |
| XP_008458926.1 | 2.25e-77 | 81.91 | PREDICTED: skin secretory protein xP2 [Cucumis melo] | [more] |
| TYK09358.1 | 1.13e-57 | 80.25 | skin secretory protein xP2 [Cucumis melo var. makuwa] | [more] |
| XP_038889219.1 | 2.21e-48 | 67.18 | classical arabinogalactan protein 11 [Benincasa hispida] | [more] |
| KAA0037616.1 | 9.33e-38 | 79.13 | skin secretory protein xP2 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KUB8 | 1.32e-84 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1 | [more] |
| A0A1S3CA92 | 1.09e-77 | 81.91 | skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1 | [more] |
| A0A5D3CDS4 | 5.48e-58 | 80.25 | Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5A7T636 | 4.52e-38 | 79.13 | Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... | [more] |
| A0A6J1BWF7 | 2.91e-28 | 55.17 | brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
