CsGy5G017090 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G017090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Actin-depolymerizing factor
Location	Gy14Chr5: 23447161 .. 23450341 (+)
RNA-Seq Expression	CsGy5G017090
Synteny	CsGy5G017090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGAATCCAAAATTTTGTTATTTTAAAAATTGTTAACGATTAATTCAAAATCTAAACGGATATTTTTCCAAAAAATTATTATAAAAAAGAATATTTGGGTTTTTTTTTTATAATTTTGAATATTAGCGTGGAATGTAATTGCACAGCACAGCCCTCAAATTCCCAATCCCATCACCACCATCATCTTCCCTTCACCATCTCCTCTCTATCTTCGTTTATCATCTTCTTCCCTTCTTCTTTGCCCTAAATTTTCTCACTCTTTCTCGCCTTTTCTTCCGCTTTCTCTCCCTAAAATGGTATCCTTTTCTTTAACTTTACCTCTTCCCTTTTTCTCTTTTCCATCTCTAACCTTCTTCCCTCTGTTTTCAAACTCAATCCTTGTATATCGCTGCACCAATCGCTTCCTAATTTCGTTTTTTCGTCTCTATCTTTATTTGGGTCCGTTTATTTATTGTTTTTAATGCCCCTAGATTGTTCATTGTGCTTATATAATGTGCTTCATATCTGTTGCCGTTTGTATATGTGAGTGTACTTTAAGTGCCATGCATTTGTAAGTGAGTGTGTAAAAATCATTGGTCACCGTTTGTGTAATGCGACCACTTATTCTATTATCGTACATTTATTGCAGTTTTCTAAATGTACTTTGTTTTCATGTTATTGTTATTTCAACTTTCAAGATTATGTAATACTAAAATTGGACTGGTTCTGGTAAAAGGAGAACGATTTTTTTTCAATATATTTTTTTACAATCTTCATTTTGCGCAATAATGGTTATTGTTAATTTGTGTTTGCTTTATCTCAGTTTAAATGTACGCATTTTGTGTTGATAAATATAATTAGAATGGTGAGTTGTTTTCACATTTTGGATTAGACGATGTTTAGTTGAGTTATGTATCCATACAAAATTATAATTTGGAAATTTAGGAATGCTTAATGATGAAATTCGAAGGGAGGAACTGAAGGATGTTGGATTAGAAAGGATAATATCAATTACCTATTTAAGTAGAGTAGAGGTTTGTTAGTGAAGTAGCCCTTCTCTTGTTGGTACATTCATTTAATATGGTCAGTCCTTGTCAAAATTCCTTTATGCATTTAAGTTATACCACTTGGGGACAGTCTGTAAGTCGCCCTCTTCTTGCTCATCTTGTTCATCCATCCTTTGTTCTCTTTCTTCTTTAAATTTTAATGTATTCCTTCCTTGTCATCATCACTATTAGTGTGTAATTGTTAGGAAATAGGGATAGTAGCCTCGTTTGGTATAGACTACAGAGTTGAGCAGCAAAATTAAGTAGCTTTAGATTTCAGGAGGGAGGAACTGGTTAAAGTTGGTCTCCTTCACATCAAAGGTTAGGGTCAGTGCTAGGTAAAATGACATCAAGAAATGAATATTGAAAAAAGGGTTGGTGGTTTTTTTTCCCTACTCTGTGTTTGAAGTTGGCCAAAGGTTCTGTTTACACTGTATTGAAGTCAATTTTAGAATTTTCTTAAAGAAGCTAGAATCCGAACAGTGTTGTAGATGCATTGTCAATTGACTTTGTTTTCGGGCCTCCTTGTGTTCAGACAATAATTCTTGTGTTTGTTTAGTAGCAGACCGTGGATATGACAATAATACTAAAGCTTCTTGGTAGGGCAAACTCAAGTAGAAGTCAATTCTGATCTTAACAAAGAAATATCTCAGATATTTTACCCTTAACCATACATGTCGATTGTGGATTTCCCAAGCACTTGAGTGATTTTAATAACTTGAGTGGGCTAGTTATGATGTATTAATGTCGAATATTATGCCATATTCCCTACAAAATACCAAAATATAAAGGTTTCTCAAAGAAGAAATCGTTCGGTTATAAAAGTTATCATGAAGAATAGGGAAGTGGTCTGAAGTCTTGGGGAAGATATAAAAAACTTTGACAAAGAAGCTAGATATGTATTATATTTCTAAGCGGGCTAGGTTGGATGCATATTTCTCTGAAGGAGACTCTGGCAGATTCTGTTTATCATATATGAGCTTCATGGTTGTATTTTCTAGCAAGGAGGTCTGATTCGTTAGAGGAATGAGAAACTGGGGCCAGTTTTCCTCCATCATCTTTACCTAGTCTATACTAGACTTCTACTATGGTTGGGGTTCTTACTATGCATGGAAATTTAGGTTCTCTGAGTTCATAATTTATATTTGTAAACCAATCTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAGGTTGTGGTGGAAAAGCTTGGCAAGCCATCTGAAAGTTATGAGGACTTCACTGCCAGCCTCCCTGCTGACGAATGCCGATACGCAGTCTATGATTTTGATTTTGTCACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTAAACGTACTACCTAGCATTCACTCTCATCATTTTTGAAACGGTTTGCCCCTCATTTCATGAACGTAACATACATTCTTACACATGATTTACCAATTTTGCATTAAGGTCACCTGATACATCAAAGGTGAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTAGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCAACTGAGATGGGACTTGATGTTATCAGAAGTCGGTCTGGCTGAGTCAAATGCTATGCAACGGCTGGTGTTGATTACGCCAAAATGTTCATAAGAATGTGGGCTCCAAACTTGCTTTTTATGAATGCTATATGATGATAACATTGGGTTGTTCTTAAAAAGTGTTACCTAAAAGCTTTTAAGGATGATTAGTGTTGTTTGGCTTTGGTGGATTTTAGTTGGATGGATAATTTTATATGCAGGTAAATATGGGATCAATGCCAGTTTGGTTTTTATCAGGACAACTACTCGGAATAATTTTCAATGATTTTCGAGTTTCATAGGTTCCATTCTTTTTTCTATTCAATTCTTCTGGTGATTTTTCATCTGTGTGATGATGATCCTATGAATTCAATATGTTGCCAAATTTTGCTGTAAAGTTTAAGCCTATGAATTTAATTTAATAGTTGGATTGGATAATTATTGGTGCATGTTTTAGATTTTGCCTAAAGCATAAGCTTTTTCGTGAG

mRNA sequence

ATAGAATCCAAAATTTTGTTATTTTAAAAATTGTTAACGATTAATTCAAAATCTAAACGGATATTTTTCCAAAAAATTATTATAAAAAAGAATATTTGGGTTTTTTTTTTATAATTTTGAATATTAGCGTGGAATGTAATTGCACAGCACAGCCCTCAAATTCCCAATCCCATCACCACCATCATCTTCCCTTCACCATCTCCTCTCTATCTTCGTTTATCATCTTCTTCCCTTCTTCTTTGCCCTAAATTTTCTCACTCTTTCTCGCCTTTTCTTCCGCTTTCTCTCCCTAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAGGTTGTGGTGGAAAAGCTTGGCAAGCCATCTGAAAGTTATGAGGACTTCACTGCCAGCCTCCCTGCTGACGAATGCCGATACGCAGTCTATGATTTTGATTTTGTCACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTCACCTGATACATCAAAGGTGAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTAGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCAACTGAGATGGGACTTGATGTTATCAGAAGTCGGTCTGGCTGAGTCAAATGCTATGCAACGGCTGGTGTTGATTACGCCAAAATGTTCATAAGAATGTGGGCTCCAAACTTGCTTTTTATGAATGCTATATGATGATAACATTGGGTTGTTCTTAAAAAGTGTTACCTAAAAGCTTTTAAGGATGATTAGTGTTGTTTGGCTTTGGTGGATTTTAGTTGGATGGATAATTTTATATGCAGGTAAATATGGGATCAATGCCAGTTTGGTTTTTATCAGGACAACTACTCGGAATAATTTTCAATGATTTTCGAGTTTCATAGGTTCCATTCTTTTTTCTATTCAATTCTTCTGGTGATTTTTCATCTGTGTGATGATGATCCTATGAATTCAATATGTTGCCAAATTTTGCTGTAAAGTTTAAGCCTATGAATTTAATTTAATAGTTGGATTGGATAATTATTGGTGCATGTTTTAGATTTTGCCTAAAGCATAAGCTTTTTCGTGAG

Coding sequence (CDS)

ATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAGGTTGTGGTGGAAAAGCTTGGCAAGCCATCTGAAAGTTATGAGGACTTCACTGCCAGCCTCCCTGCTGACGAATGCCGATACGCAGTCTATGATTTTGATTTTGTCACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTCACCTGATACATCAAAGGTGAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTAGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCAACTGAGATGGGACTTGATGTTATCAGAAGTCGGTCTGGCTGA

Protein sequence

MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSG*

Homology

[Close]

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.0e-67
Identity = 123/139 (88.49%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLG+P+ESYEDFTA L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDF+T+EN QKSRI FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 140
           LQATDPTEMGLDV RSR+G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.6e-65
Identity = 121/138 (87.68%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P+ESYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVT ENCQKSRI FIAW PDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQA DPTEMGLDVI+SR+
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-63
Identity = 117/137 (85.40%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+G+P  +YEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.3e-63
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P ++YE+F A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 112/138 (81.16%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+G+P  +Y+DF ASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA++D+DFVTEENCQKS+I FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTE+GLDVIR R+
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

[Close]

BLAST of CsGy5G017090 vs. NCBI nr
Match: XP_004142738.1 (actin-depolymerizing factor 2 isoform X1 [Cucumis sativus] >XP_011655353.1 actin-depolymerizing factor 2 isoform X2 [Cucumis sativus] >KGN51280.1 hypothetical protein Csa_009315 [Cucumis sativus])

HSP 1 Score: 276 bits (706), Expect = 1.68e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. NCBI nr
Match: XP_008463478.1 (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479.1 PREDICTED: actin-depolymerizing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 6.86e-93
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PSESYEDFTASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. NCBI nr
Match: XP_038891099.1 (actin-depolymerizing factor 2 [Benincasa hispida])

HSP 1 Score: 272 bits (695), Expect = 8.01e-92
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDFTASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDP+EMGLDVIRSRSG
Sbjct: 121 LQATDPSEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. NCBI nr
Match: XP_023534804.1 (actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272 bits (695), Expect = 8.29e-92
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. NCBI nr
Match: XP_022922159.1 (actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolymerizing factor 2 [Cucurbita maxima] >KAG6602360.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033039.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270 bits (691), Expect = 3.38e-91
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL
Match: A0A0A0KNQ1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 276 bits (706), Expect = 8.15e-94
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL
Match: A0A1S3CJB1 (actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640 PE=3 SV=1)

HSP 1 Score: 275 bits (702), Expect = 3.32e-93
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PSESYEDFTASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL
Match: A0A6J1JTE7 (actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.64e-91
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL
Match: A0A6J1E2L4 (actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.64e-91
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL
Match: A0A6J1K1F6 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 PE=3 SV=1)

HSP 1 Score: 267 bits (683), Expect = 2.81e-90
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFLDLKAKRT+RFIVFKIEEK KQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSG 139
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]

BLAST of CsGy5G017090 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-64
Identity = 117/137 (85.40%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+G+P  +YEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CsGy5G017090 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-64
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P ++YE+F A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CsGy5G017090 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 240.4 bits (612), Expect = 9.0e-64
Identity = 116/137 (84.67%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLP 61
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P ++YE+F A LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRS 139
           QATDPTEM LDV RSR+
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of CsGy5G017090 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 234.6 bits (597), Expect = 4.9e-62
Identity = 112/138 (81.16%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60
           MANAASGMAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLG+P +SY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]

BLAST of CsGy5G017090 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 230.3 bits (586), Expect = 9.3e-61
Identity = 110/130 (84.62%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 8   MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLPADECRY 67
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+G+P  +YEDF ASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMGLDVIRSR 138
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:

BLAST of CsGy5G017090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	5.0e-67	88.49	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9FVI2	3.6e-65	87.68	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9ZSK3	2.0e-63	85.40	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q39250	3.3e-63	84.78	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q0DLA3	1.8e-61	81.16	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]

BLAST of CsGy5G017090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142738.1	1.68e-93	100.00	actin-depolymerizing factor 2 isoform X1 [Cucumis sativus] >XP_011655353.1 actin...	[more]
XP_008463478.1	6.86e-93	99.28	PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479...	[more]
XP_038891099.1	8.01e-92	97.84	actin-depolymerizing factor 2 [Benincasa hispida]	[more]
XP_023534804.1	8.29e-92	97.84	actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022922159.1	3.38e-91	97.12	actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolym...	[more]

BLAST of CsGy5G017090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNQ1	8.15e-94	100.00	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 ...	[more]
A0A1S3CJB1	3.32e-93	99.28	actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640...	[more]
A0A6J1JTE7	1.64e-91	97.12	actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 S...	[more]
A0A6J1E2L4	1.64e-91	97.12	actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3...	[more]
A0A6J1K1F6	2.81e-90	96.40	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 P...	[more]

BLAST of CsGy5G017090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59890.1	1.4e-64	85.40	actin depolymerizing factor 4	[more]
AT3G46010.1	2.4e-64	84.78	actin depolymerizing factor 1	[more]
AT3G46010.2	9.0e-64	84.67	actin depolymerizing factor 1	[more]
AT3G46000.1	4.9e-62	81.16	actin depolymerizing factor 2	[more]
AT5G59890.2	9.3e-61	84.62	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 4.5E-58 score: 208.9
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 1.6E-37 score: 128.0
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..139 score: 38.717911
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 4.7E-53 score: 181.3
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..137 e-value: 1.18407E-65 score: 193.927
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G017090.2	CsGy5G017090.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding