CsGy5G016690 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G016690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein S23
Location	Gy14Chr5: 23036099 .. 23041390 (+)
RNA-Seq Expression	CsGy5G016690
Synteny	CsGy5G016690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCAATACTCTCACAAGTTCGGATCATGTAAGTTATCGCCAAATTTATTAATGAACTTTTTATATTGGAAATTGAAACAACCTTAGCACCCTTATGATATCCCATGCAAAACAAGATTTCAGAAATTACAATAGATCTGAAATACTTGATTACATAGAATAAATAAAAGCATTTCAATTGAGGTAGTTTTTCATTAATTTGTTTTATTTTCACTCTTTTTATATGCAGATTTTTTATTGGGAAATTGAGAAATTGGTTGGAGATGAAGGGAGGTGGTTTTCTACAATGAAGATTGAAGAGAGTTTCACTACTGATCCTGAGGAAGATAAAGAATCAGGTACCTTAGGGTTTTAATTCATGCAAAATTATTTTGTATATATAACTTAGAATCTAAATTGAATAAAGTTTATTTCATTCCTTGACAGAAAACCGACAACAAATCACTAAAGAAATGGTTTGAAAAGGTAAGAAGTTGGATAATCATCCCATTATATTAGAGAGTATGAAAGACTAACTGAACTTTTTTTCCCACTTAAAAGTATCTAATTGTTAATCTTTTAATATATGGTTCAAAAAATGCTGGCAACAGTAATTTAAAGCCATGAACTTTAAAATATTATCTACTTATTTGTCACTTCATGGTTTTCCTTTGTATATACTTATTCGTCAAATTCTTGTGAGAAGATGATATTTGGCTTTGTAGTGCTATTGTCCAACTTTCTTAAATAACTTTGAAAGGGAACGAGTATCATGTCGCTATGTATTTTCGTATAATTCTACATTTAAAATTGAAATTTATATGAATAAAAAATTTGATTTACAAACTAAGCATTATCTGTTGTTGTTTACGTCGAATGTGTCTTCGATCTGTGTCAACAACATTGAGTCATATGGTTTACTAAATGAATAATATGCTATATATTTTTCAAGGTTTGATCACACATTAAGCTTAAATCTTGAACAAAATTATTCTAAACGAATATAAATAATGTATAGTTTTATAAAACAATTCATATTAAAATTCTTACCGTACAATAATAATAAGCGTTATCAGATGTGATAAATTATTTTGTAATTGATGTGTACTAAGGGAAACAGTCATTTGATACAGTGGGCTCGTGTGTTGCTCCTCCTTGTACACAAAGTTCATTTCGCAAATGCCACATTGCGATATACTTTGTATTGATCCTACACCAATCTTGATCGTTTTTCTCTTAAATCAATTTGGTGCAGTGTAAGGTTTGTATAGCACAATGATGGTTGGGTTTGAAGCTTACTGAACTATCACAACACACGATTTGGTACATGCAACTCAATGATATGCTTTTATAGGGCCCATGTAAGTCCATGCCACTTCAACAATATGACATCGATCAAGAAGCAATGCCATAATATTGAATTTGTATGGTGTCCAATTAACATGTTAGAAAAATAAACATAAGTAGACAACAAAAAATAAGTAGATAACATTTGTATAATACTTTACTACCCGAATGTGTATCAGTTAATCAAATATCTGTTGATAGGTTAGCAATATATTTGTCTATTATTTCAATGTAGGTAGAGCACCACGTTATCTAATGTGTGAAAAAATTAATAATAAGTTATAAAGAGTGAAAGTTCTATTAATATATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACTTGAAACTCATTGGTCAAGCAATTGGAGTCTATAATGCAACTTATGAAGCTACATTGGGAAATGGGAAATATGTCATATGCCCATACTTGCAGTATCATTAATGGCCCGCGCCCTAAGAGTACGTACCAACCTAGTCAAAATCACTTAAAAGCGGAAGAAATGTGCAATGTACGAGGGTATTTAACTTGTTGGCAAATAAAAAGACTTCAATATATGAGTTGCATTATGCATGCACGAGCTTATCTCTGGATGTTCACAACATCAACATTTAGTGGCAATTCTATGAATTGTTCAGCCAACCATTGAAGACTCAATCTTTGACTTTTCATGTCAGGTGGTAAAACTGCTAAGAAATCTTCACATACTTGCTGTCAGGTTAACGATTCTACAATAGGCTCTTTGTCCACAAGTAACCTCAATTGGATCGCAATGTAATTGTGCACTCTTCACAAGACATATGAAATGTGTGAGTCTCTAGTCTCCAACGCTCCACCAAAGTAATAATTAAGTATCAATCCAACTGCATGAATCCTATATGTGAAACTCCAAGACATCCAACAGCCTCTAAGTACAACACTCATCAAAAGGGATCGTGTGTTGCGATGCTTCCTCTCTCCTCAACCAACTCAAAACCAATGTAGAGGAAGTATCTCAAAACCAATATGAGCGATGGGACAGTTGTTGATATAGTTGGGTACGATCAACAAGGTCAGGTTCCATTGTGCAAATTTCCTAAAACATATTTAATTAATAACATAGATTAAACCCTAAAATATACATCAAGTTATAAAATCAAACAATTACATAAAAGTAGTTCATTAAAAATTACAAAAACCCTAAAATACAACATATATGTGTCTTGAAGAAAAAACACGTAAAGGACAAGTACCTCATGTTATGTCCTTCTGCCTTACAGATTGTATATCTAACTAATTGATTGGACTCTAACTAATTTGATTGGACTCTTTTCAATCCATTTCATTATGGATCCTAGTAGTTTTAGGTCAACGGGGTTCTCTAAGTAAGTCTGCATTTAGGCGAACTTCACTGAATGATAACTTTGGTCAATAATCTAAATATTTATAGTCAAACGATACTTGGACATCAAGCAAATCAAATGACTTTAATTTGTCCTTGATATATGTGTATGATCCAATGACTCCAAATATTCTAGAGAGACGTGAAAGATCCAACAACCACAAATTAATCTTGAACAAAGTGTGAGATTCAATGATCCAAAATTGAAGAAAAATCTTGATAATTATCCAACATTATTATGGCTTCAATTGAATACTTTAACATTTAATTGAATATTTCAATTTACTTTGTCGATTTATAAAACAAAATAACATTATCACCATTCCACATAAGCACTTAACAATTCAATCATTTTTGTGTTTGTTTTAGTGACCCTTTAGAATCATTTTACTAACCTAAGAAACTAAAATGTCACTATTAAAATCTTTTGATCGATTCCAAATCTTATGGACTAATAGTTCATTTTTGGACTTGGTTTTATGCTTAATATTTATTGAAAACAAAAATTAAAGAGTCATGAGAAAAATAATACATAGAAAAGATTTATATTTTATAATATTGTATATAAAATCCCGCAATTGCAAAGCAATTAGGGTTTGAGTTACCGCCAGTCAGTCTTCACATACTGCTTTCGAATTTGGGCGTTTCTTGAAGAAGTTTACTGCATCTTCCTTATCTGCAATCATGGGGTACGCATTTCTCTCTTCTCTGCATCATCTTTCTTCCATGTCCTTTCTATCTTCTTCATCTTCATCCAATTATGTTCTCTCCGACAAGTTGTTCATATTCTTTTGTTCAACTTTTATGAACAACCCTTATGTCGCTTGGATCTTCGATTTTAATCTGGCTATTTGTTAGGATGTTAAACTGAACATTGCAAACCTGGAGAAACGATGCATCGAGGAGTACTTTCCTTTTTCTTTTTATTTTTTTACTCCAGAACAAAATGGATTATCGAAGCATTTATTTGAAATGTCTTGGTTTAAAACATGGTTCGATCGTTCTAGTTGTTTTATTGATAAACTGATAGGCTCGGAGTTGCGGATAATCTGTTTTTTTTCCGATTCAGATTATGTGAGTGCATATGGTTCGAAGAATTTATTCGTATAGCATCGGTGGAAACAACTTTGTAGATTCAAAACTCGTATACCATCTTTTTGATATGTTCGATTACAACTTCTATACCTTTTTTTTTTTTTTGGGAGAGCTGTTGAGCTTAGATTTCTCATACTCAATATCAGTATGTAGATTCCGTGCTTCGCTTATGCTGGGTCTTTAGTCTCTCTTTCTCTGATCATCTATTTTGTTAAGGAGTATACTTGGATACTATGAGTGGAAATACCTTCCCAAATCATATACTAAGCTTGGATAGGGGATATTACTGTTTAATAATTTTGATATGTAGTTTCGTAGGAGGAGACATGAACAGAGATTGGTTTCTCACCCTCATTGAATTTCATATGCATGCTCCCAGTCTTAATATGTAGAGTAGATGTACATTATTCTTCACAAATGCCTAGAGTCTTCAGCCCCATCCAAATAATTGGAATATACATACTTAGCAAAACTGATTTTCTCCAACTGTCTTCTCTATTGTGTGTATGTTCAACTCCCTGCTATGGTAATGACTGAGTTTTGTTTCATATGTGCACAGCCAATTTGTTCTGATCATGTAACTAATATTAGTGATGATTGTATTTTCTTTGTTTGCATGTCGTGCAGGAAGACTCGTGGAATGGGAGCTGGTCGAAAGTTGAAATCTCACCGTAGAAGGCAGAGGTGGGCAGACAAGGCATATAAGAAATCTCATCTTGGTAACGAGTGGAAAAAGCCCTTTGCAGGGTCGTCTCATGCAAAAGGGATTGTGCTTGAGAAGATGTAAAGCTACCGATTGATTCTTATGCTATTATAGATGAATTACTCACGTTTATTTGTCTTTTAACAAAGTTGAATTTGCTAATACAGTGGAATTGAAGCCAAGCAGCCCAACTCTGCTATTAGAAAATGTGCTCGTGTTCAATTGATTAAAAATGGGAAGAAGATTGCTGCTTTTGTGCCTAATGATGGCTGTCTCAATTACATTGAGGAAAATGTAAGTTCACCTAATTTGCTTATGCAGTAAATTATTAGTAATGTTTATGTTATTTCTCCTGCTGGCCGCCTACATTAGTTTTTTTCCTAGAAATGAAATCTATGCCCAATCTTAAAAACTAGAAAACTATTTTCTGATTCTCACTAACTCATGTGTTGGTGGTCAAAAAGTGGTGAAAGAAAGGGTCCTATCCTAACTTAGAGGGAACGAGTTCCATTAATGTGAATTTACCTATTTTAGTATCCTAAGAGTTGTAAATATTATGGCGAATGAGATAGGTAAATTTGTACTGAAATGATAGGTTTTAAATTTGTTATTGTTTTGTGTTAACAGGACGAGGTATTGATTGCGGGGTTTGGACGTAAGGGTCATGCTGTGGGAGATATTCCCGGTGTTAGATTCAAGGTTGTTAAGGTTTCTGGAGTTTCACTTCTTGCTCTCTTCAAAGAGAAGAAAGAAAAGCCAAGATCCTAG

mRNA sequence

ATGGAGCTCAATACTCTCACAAGTTCGGATCATATTTTTTATTGGGAAATTGAGAAATTGGTTGGAGATGAAGGGAGGAAGATAAAGAATCAGAAAACCGACAACAAATCACTAAAGAAATGGTTTGAAAAGTGTAAGGGCCCATTATCATTAATGGCCCGCGCCCTAAGAAAGTTTACTGCATCTTCCTTATCTGCAATCATGGGGAAGACTCGTGGAATGGGAGCTGGTCGAAAGTTGAAATCTCACCGTAGAAGGCAGAGGTGGGCAGACAAGGCATATAAGAAATCTCATCTTGGTAACGAGTGGAAAAAGCCCTTTGCAGGGTCGTCTCATGCAAAAGGGATTGTGCTTGAGAAGATTGGAATTGAAGCCAAGCAGCCCAACTCTGCTATTAGAAAATGTGCTCGTGTTCAATTGATTAAAAATGGGAAGAAGATTGCTGCTTTTGTGCCTAATGATGGCTGTCTCAATTACATTGAGGAAAATGACGAGGTATTGATTGCGGGGTTTGGACGTAAGGGTCATGCTGTGGGAGATATTCCCGGTGTTAGATTCAAGGTTGTTAAGGTTTCTGGAGTTTCACTTCTTGCTCTCTTCAAAGAGAAGAAAGAAAAGCCAAGATCCTAG

Coding sequence (CDS)

ATGGAGCTCAATACTCTCACAAGTTCGGATCATATTTTTTATTGGGAAATTGAGAAATTGGTTGGAGATGAAGGGAGGAAGATAAAGAATCAGAAAACCGACAACAAATCACTAAAGAAATGGTTTGAAAAGTGTAAGGGCCCATTATCATTAATGGCCCGCGCCCTAAGAAAGTTTACTGCATCTTCCTTATCTGCAATCATGGGGAAGACTCGTGGAATGGGAGCTGGTCGAAAGTTGAAATCTCACCGTAGAAGGCAGAGGTGGGCAGACAAGGCATATAAGAAATCTCATCTTGGTAACGAGTGGAAAAAGCCCTTTGCAGGGTCGTCTCATGCAAAAGGGATTGTGCTTGAGAAGATTGGAATTGAAGCCAAGCAGCCCAACTCTGCTATTAGAAAATGTGCTCGTGTTCAATTGATTAAAAATGGGAAGAAGATTGCTGCTTTTGTGCCTAATGATGGCTGTCTCAATTACATTGAGGAAAATGACGAGGTATTGATTGCGGGGTTTGGACGTAAGGGTCATGCTGTGGGAGATATTCCCGGTGTTAGATTCAAGGTTGTTAAGGTTTCTGGAGTTTCACTTCTTGCTCTCTTCAAAGAGAAGAAAGAAAAGCCAAGATCCTAG

Protein sequence

MELNTLTSSDHIFYWEIEKLVGDEGRKIKNQKTDNKSLKKWFEKCKGPLSLMARALRKFTASSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS*

Homology

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BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot
Match: P46297 (40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGA RKLK+HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

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BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot
Match: Q9M5Z9 (40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKT GMGA RKLKSHRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot
Match: P49201 (40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-72
Identity = 137/142 (96.48%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot
Match: Q9SF35 (40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 2.1e-69
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot
Match: Q9GRJ3 (40S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.5e-62
Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 127
           MGK RG+   RKLK+HRR QRW DK YKKSHLG  WK  PF G+SHAKGIVLEK+G+EAK
Sbjct: 1   MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAK 60

Query: 128 QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 187
           QPNSAIRKC RVQLIKNGKKI AFVP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRF
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120

Query: 188 KVVKVSGVSLLALFKEKKEKPRS 210
           KVVKV+ VSLLAL+K+KKE+PRS
Sbjct: 121 KVVKVASVSLLALYKQKKERPRS 143

[Close]

BLAST of CsGy5G016690 vs. NCBI nr
Match: CDP06706.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 287 bits (735), Expect = 4.76e-96
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 62  SSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 121
           S L+AIMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 36  SRLTAIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 95

Query: 122 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 181
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 96  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 155

Query: 182 PGVRFKVVKVSGVSLLALFKEKKEKPRS 209
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 156 PGVRFKVVKVSGVSLLALFKEKKEKPRS 183

[Close]

BLAST of CsGy5G016690 vs. NCBI nr
Match: PIA38663.1 (hypothetical protein AQUCO_02700115v1, partial [Aquilegia coerulea])

HSP 1 Score: 286 bits (731), Expect = 1.52e-95
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 62  SSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 121
           S L+ IMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 29  SHLTVIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 88

Query: 122 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 181
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 89  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 148

Query: 182 PGVRFKVVKVSGVSLLALFKEKKEKPRS 209
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 149 PGVRFKVVKVSGVSLLALFKEKKEKPRS 176

[Close]

BLAST of CsGy5G016690 vs. NCBI nr
Match: KAF3946178.1 (hypothetical protein CMV_027526, partial [Castanea mollissima])

HSP 1 Score: 284 bits (726), Expect = 6.01e-95
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 64  LSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 123
           LS  MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGI
Sbjct: 20  LSVTMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 79

Query: 124 EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 183
           EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG
Sbjct: 80  EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 139

Query: 184 VRFKVVKVSGVSLLALFKEKKEKPRS 209
           VRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 140 VRFKVVKVSGVSLLALFKEKKEKPRS 165

[Close]

BLAST of CsGy5G016690 vs. NCBI nr
Match: PIA25887.1 (hypothetical protein AQUCO_10500021v1, partial [Aquilegia coerulea])

HSP 1 Score: 284 bits (727), Expect = 7.59e-95
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 64  LSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 123
           L +IMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGI
Sbjct: 37  LPSIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 96

Query: 124 EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 183
           EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG
Sbjct: 97  EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 156

Query: 184 VRFKVVKVSGVSLLALFKEKKEKPRS 209
           VRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 157 VRFKVVKVSGVSLLALFKEKKEKPRS 182

[Close]

BLAST of CsGy5G016690 vs. NCBI nr
Match: XP_004137806.1 (40S ribosomal protein S23 [Cucumis sativus] >XP_004143809.1 40S ribosomal protein S23 [Cucumis sativus] >XP_004149560.1 40S ribosomal protein S23 [Cucumis sativus] >XP_008442648.1 PREDICTED: 40S ribosomal protein S23 [Cucumis melo] >XP_008463567.1 PREDICTED: 40S ribosomal protein S23 [Cucumis melo] >XP_008463898.1 PREDICTED: 40S ribosomal protein S23 [Cucumis melo] >XP_010244979.1 PREDICTED: 40S ribosomal protein S23 [Nelumbo nucifera] >XP_010253521.1 PREDICTED: 40S ribosomal protein S23 [Nelumbo nucifera] >XP_011077380.1 40S ribosomal protein S23 [Sesamum indicum] >XP_011094704.1 40S ribosomal protein S23 [Sesamum indicum] >XP_011094750.1 40S ribosomal protein S23 [Sesamum indicum] >XP_015871640.1 40S ribosomal protein S23 [Ziziphus jujuba] >XP_015874365.1 40S ribosomal protein S23 [Ziziphus jujuba] >XP_019159119.1 PREDICTED: 40S ribosomal protein S23 [Ipomoea nil] >XP_019199308.1 PREDICTED: 40S ribosomal protein S23 [Ipomoea nil] >XP_022146292.1 40S ribosomal protein S23 [Momordica charantia] >XP_022846964.1 40S ribosomal protein S23 [Olea europaea var. sylvestris] >XP_022860588.1 40S ribosomal protein S23 [Olea europaea var. sylvestris] >XP_022868249.1 40S ribosomal protein S23 [Olea europaea var. sylvestris] >XP_022893103.1 40S ribosomal protein S23 [Olea europaea var. sylvestris] >XP_022923344.1 40S ribosomal protein S23-like [Cucurbita moschata] >XP_022944535.1 40S ribosomal protein S23-like [Cucurbita moschata] >XP_022951215.1 40S ribosomal protein S23-like [Cucurbita moschata] >XP_022985542.1 40S ribosomal protein S23-like [Cucurbita maxima] >XP_022990481.1 40S ribosomal protein S23-like [Cucurbita maxima] >XP_023005893.1 40S ribosomal protein S23-like [Cucurbita maxima] >XP_023512024.1 40S ribosomal protein S23-like [Cucurbita pepo subsp. pepo] >XP_023538819.1 40S ribosomal protein S23-like [Cucurbita pepo subsp. pepo] >XP_028112674.1 40S ribosomal protein S23-like [Camellia sinensis] >XP_028118234.1 40S ribosomal protein S23-like [Camellia sinensis] >XP_031111005.1 40S ribosomal protein S23 [Ipomoea triloba] >XP_038890679.1 40S ribosomal protein S23 [Benincasa hispida] >XP_038900543.1 40S ribosomal protein S23 [Benincasa hispida] >XP_038903484.1 40S ribosomal protein S23 [Benincasa hispida] >KAG6602334.1 40S ribosomal protein S23, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010604.1 40S ribosomal protein S23, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG8376519.1 hypothetical protein BUALT_Bualt09G0071800 [Buddleja alternifolia] >PIN05081.1 40S ribosomal protein S23 [Handroanthus impetiginosus] >CAA3000695.1 40S ribosomal S23 [Olea europaea subsp. europaea] >GFZ11112.1 ribosomal protein S12/S23 family protein [Actinidia rufa])

HSP 1 Score: 282 bits (722), Expect = 1.11e-94
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 209
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL
Match: A0A068UE32 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023642001 PE=3 SV=1)

HSP 1 Score: 287 bits (735), Expect = 2.30e-96
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 62  SSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 121
           S L+AIMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 36  SRLTAIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 95

Query: 122 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 181
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 96  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 155

Query: 182 PGVRFKVVKVSGVSLLALFKEKKEKPRS 209
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 156 PGVRFKVVKVSGVSLLALFKEKKEKPRS 183

[Close]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL
Match: A0A2G5D591 (Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700115v1 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 7.36e-96
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 62  SSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 121
           S L+ IMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 29  SHLTVIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 88

Query: 122 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 181
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 89  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 148

Query: 182 PGVRFKVVKVSGVSLLALFKEKKEKPRS 209
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 149 PGVRFKVVKVSGVSLLALFKEKKEKPRS 176

[Close]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL
Match: M5X0T9 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012246mg PE=3 SV=1)

HSP 1 Score: 284 bits (727), Expect = 3.20e-95
Identity = 148/163 (90.80%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 51  LMARALRKFTA----SSLSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKP 110
           L   AL  F A    S+LSA MGKTRGMGA RKLK HRRRQRWADK+YKKSHLGNEWKKP
Sbjct: 16  LRLSALSTFAAEVQDSTLSAAMGKTRGMGAARKLKDHRRRQRWADKSYKKSHLGNEWKKP 75

Query: 111 FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEV 170
           FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEV
Sbjct: 76  FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEV 135

Query: 171 LIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 209
           LIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 136 LIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 178

[Close]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL
Match: A0A2G5C510 (Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_10500021v1 PE=3 SV=1)

HSP 1 Score: 284 bits (727), Expect = 3.68e-95
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 64  LSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 123
           L +IMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGI
Sbjct: 37  LPSIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 96

Query: 124 EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 183
           EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG
Sbjct: 97  EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 156

Query: 184 VRFKVVKVSGVSLLALFKEKKEKPRS 209
           VRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 157 VRFKVVKVSGVSLLALFKEKKEKPRS 182

[Close]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL
Match: A0A5B6Z065 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_006978 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 3.83e-95
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 64  LSAIMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGI 123
           LSA MGKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGI
Sbjct: 28  LSATMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGI 87

Query: 124 EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 183
           EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG
Sbjct: 88  EAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPG 147

Query: 184 VRFKVVKVSGVSLLALFKEKKEKPRS 209
           VRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 148 VRFKVVKVSGVSLLALFKEKKEKPRS 173

[Close]

BLAST of CsGy5G016690 vs. TAIR 10
Match: AT5G02960.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 272.3 bits (695), Expect = 3.2e-73
Identity = 137/142 (96.48%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. TAIR 10
Match: AT3G09680.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-70
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 68  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 127
           MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQ 60

Query: 128 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 187
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 188 VVKVSGVSLLALFKEKKEKPRS 210
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of CsGy5G016690 vs. TAIR 10
Match: ATCG00065.1 (ribosomal protein S12A )

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 101 NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 160
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 161 IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 191
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

[Close]

BLAST of CsGy5G016690 vs. TAIR 10
Match: ATCG01230.1 (ribosomal protein S12B )

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 101 NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 160
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 161 IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 191
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

[Close]

BLAST of CsGy5G016690 vs. TAIR 10
Match: ATCG00905.1 (ribosomal protein S12C )

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 101 NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 160
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 161 IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 191
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

The following BLAST results are available for this feature:

BLAST of CsGy5G016690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46297	1.3e-74	97.89	40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1	[more]
Q9M5Z9	1.1e-73	97.18	40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1	[more]
P49201	4.5e-72	96.48	40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2	[more]
Q9SF35	2.1e-69	94.37	40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2	[more]
Q9GRJ3	5.5e-62	81.12	40S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1	[more]

BLAST of CsGy5G016690 vs. NCBI nr


Match Name	E-value	Identity	Description
CDP06706.1	4.76e-96	97.97	unnamed protein product [Coffea canephora]	[more]
PIA38663.1	1.52e-95	97.30	hypothetical protein AQUCO_02700115v1, partial [Aquilegia coerulea]	[more]
KAF3946178.1	6.01e-95	97.95	hypothetical protein CMV_027526, partial [Castanea mollissima]	[more]
PIA25887.1	7.59e-95	97.95	hypothetical protein AQUCO_10500021v1, partial [Aquilegia coerulea]	[more]
XP_004137806.1	1.11e-94	100.00	40S ribosomal protein S23 [Cucumis sativus] >XP_004143809.1 40S ribosomal protei...	[more]

BLAST of CsGy5G016690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A068UE32	2.30e-96	97.97	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023642001 PE=3 ...	[more]
A0A2G5D591	7.36e-96	97.30	Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_0270...	[more]
M5X0T9	3.20e-95	90.80	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012246mg PE=3 SV=1	[more]
A0A2G5C510	3.68e-95	97.95	Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_1050...	[more]
A0A5B6Z065	3.83e-95	98.63	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_006978...	[more]

BLAST of CsGy5G016690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02960.1	3.2e-73	96.48	Ribosomal protein S12/S23 family protein	[more]
AT3G09680.1	1.5e-70	94.37	Ribosomal protein S12/S23 family protein	[more]
ATCG00065.1	5.8e-06	36.26	ribosomal protein S12A	[more]
ATCG01230.1	5.8e-06	36.26	ribosomal protein S12B	[more]
ATCG00905.1	5.8e-06	36.26	ribosomal protein S12C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosom_S12_S23	coord: 98..208 e-value: 2.1E-49 score: 165.9
IPR006032	Ribosomal protein S12/S23	PANTHER	PTHR11652	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	coord: 64..209
IPR006032	Ribosomal protein S12/S23	PROSITE	PS00055	RIBOSOMAL_S12	coord: 126..133
None	No IPR available	GENE3D	2.40.50.140		coord: 92..209 e-value: 1.3E-46 score: 158.9
None	No IPR available	PANTHER	PTHR11652:SF59	BNACNNG03140D PROTEIN	coord: 64..209
IPR005680	Ribosomal protein S23, eukaryotic/archaeal	TIGRFAM	TIGR00982	TIGR00982	coord: 73..208 e-value: 2.3E-52 score: 174.3
IPR005680	Ribosomal protein S23, eukaryotic/archaeal	CDD	cd03367	Ribosomal_S23	coord: 93..206 e-value: 3.06717E-76 score: 222.915
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 87..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G016690.2	CsGy5G016690.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome