CsGy5G016490 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G016490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RNase H domain-containing protein
Location	Gy14Chr5: 22773688 .. 22784366 (-)
RNA-Seq Expression	CsGy5G016490
Synteny	CsGy5G016490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCATTTGATCTCTCCTTAAATTCCCTGCAATTTATTTAAGCACACTTTTAATTCCTGGCTTGATGAGCAACAAACCCTTGTTACCTCTGAATTTGACAATTACACCAAAATAACTTATAGATTGCTTGTAGAGACATTTATTTCGACTTGCTACAAGCTTTGGAGAGCGGCTACAAAATTGATAAACTATGAAATGTTTTGTTTCGCTATATGCTAATACTTTAAATCGAAGAAACTATCCTTCGTTAATTTGAAGATTTAAAATGGTTCTGTTGTTTTGCAATTTTCCGAATAATTTAGCCTAGAAGAGAAGTACTCGGAAGAGAGGGAAAGAAGAAGGTGGAGTCTGTGGAGCAGCTTTGAATGGACAAAAAAACCTATTGGACGACATTGATTTAAGCTGGGAATCTTCATAGTGACCGGAAAACTACCCTCTGATGAACTGCTTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATGCCTACTGGACCTCATCCTTTCACAATGTCGCTGTAAAGACTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCCACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCCGTGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGGTATTCATTTCTTCAGTTTTCACTAGTGACTTCTTGCTTCTTCAACTACTGTTCTAATTGATTGATTATTTTCTTGCTTTCTCTGTGACTAGACTGCTTTGGTGCTTCTCGGCTTTCTTGTTTGAAGTTACTTTAGGGTTTTATATTGGTTACATTTAATTGTTTTTGAAGCATTGGCTCAATGATCGATCAGTTCTTCCCCTTCTGCGGGCTTTTTATTGCATAAAGCTTATGCTTTTACTTGAGAAGCATAGCTTTTCTCATTTGTTAGTTTTACTCATTCCTGCGGATTTCTTGTAATTGATACATTTCATTTAGTGGATTAAGCTCGGGTATTATCTTTTCTTTTCTATCGCAGATATGTGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGCGCCTTGCACTTTTCATGTATGATGTTTCATTAATTTGATGATTGAGTTAAAAAGTTTAAGAGAACATTATCTGCCATGTTTATATAAGAAAATGGTAGGAAACAGATTATACCTCTGGTCTTTTATGGAACTATTTAAGGATCAATTGATTAATATTTTCCCAAATAAATTATCCCAGGTTGGTCATTATAGAAGTGGGTGAATTTTACGGCTTTTGTCTTCCATACCTTACAATTATTAGCAAGGGATCATAGTGTTCGTGAGGAAATAGCATATTATTTGTCTCCCTAGGTCATCACTTTGAGTTTATGCTCCATTTCCTCTCTTACCTTGTTACTTTCTATTTTGTAGAGACCATGGTTTCTTGTCATATAGAAAGAATGGTATAACTAGTACAGTTTGAACTTTAAAGCCAGACGTTGAAGGCTGTAAATTACAGCCACATGAAGCATTTTATAATTACCGGTTTTTTCCAATAGCTAAATTAGGAGGTTAGGCTTTCAATGTTGATTATACATAGATTCAGTTTTTACTAGATGTACTACCAAAAACATTTAAAATGTTTCAATTTATCCAATATCCTTCCTGGACTATCTTTGTTCACTCTAGCATAAGTTAAAATGTTTCTTTCGGCCAGGGTGGAGATACCTCTCTTACAGGTGAGACTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTACCCGAAAATGTTGTAAGTTGACTTTCAGGATATCTTCTAAACTAAAATTTTAACTGAAGCAAATGATGCCTGTAATTGTATACAAAGTAACTTGCTAAACTGTTTTTGATATGCAACTTATGGTTTTTGTTGTCATGTTTGTTTGCTTGTGGTTAATGTAGGTTTTAATGTTTGCAGGGGTCAACTGTTTTAACTCCTACATTAAAAGATCCCACGAGGAAACATATTAAGTTGGAAGATTCCATTGTGTCCCATTCAGTATCCTCCAACCGGGTAAGTCATTGGGTTGTGTTCATGTGATTCGGTATTTATTGTCTTGTGTTAGCTGTTAGGTATCTAACACAATATTTTCTGCAAAAGACAAGTAAGCAGCAAACATACAGCCAAATGACACCAAGAAGAATGAAAATATTTCCAGTCTCACTGTTTGATAGAGAGTTCTTCAATATACAGAGAGATTTATAATTCGAAAGAACGACTATGCTTCCTTTGCCTTAAGAAGACAAGATACAATCCCTTAAACTCTAGAGAGAGAGGGTTGATCTCACTTCTCATATATTCACTTCAATACCAAAAACATACCCCAGGCACACACTTCCCACAACTATAAGAACCCTAAGAATGCACAACAAAAGAGTCCCTACTTAATTCTGTTCCTACCCTTCATGAATAACTTGTCCTCAAGGTTAAAAGAAGGAAACTGCCGCTTCAAGAATTCCATTGCTTCCCAAGTTGCATTAGATGGCAGCAGTTGCCCATCCCATCATATGAACCATTCTTCCATGATTTTTCCACATTCCATCTAATCCCTAAGCACATCTTTTGGTTCAACTTGCCATTCATAACTCTCCAAAAATAGAGGTAATGGCTGTTAAGGCTGATTGTAACCTGTAACCTCTTTAACTGATCTTTCTCAAACAGAGTAAGGAATGATCCTGTGCTAATAATGGATGTTCCAATGTATCGTTTGAAGTCTGCTTTTAAACTAGTTATGTATTTCATTTTTTCCTGTGTTGCTGTAAGTGCAAGATCATTCGGAAGATGTTAAACCAGTAAACCTTCGGGTTGTTTGGCCCACGGGTTTGGAATTGGGGGGTTTGACATTTGAAGCCAAACCCATGTTTGGACACTTGGAATAAAATTCCTGGGATTAAGAATTGATGATCGTTGGCAACAAATGTTAGCCAACTTCACGATCAACCACGATGACCGATCGTCTTTCACAACAACCGATCGTCTTAACCATCGGCTTCGGATTGTCTTGACCGTCAATTATCAATCGTCTTGATCATCAACGACCATTCATGTTAATGCAACTATAATAAAAATTATTGTTATCAAATATTTAAATTTATCGTTTTTACATTATTTTCATTAAAATCAATAGTCTAAGAAATTGAATTAGAGATACAAAATAAATTTAGGACGTACAATTAATAAAAAAGAAACTACAAAAATTAGCTAAACCCATGAATTAACAACCAACACCCTAAACACAAATCCAGATTTCCAAATCCTGCATCCCAAACACAGACATCTGTAGTCTCCAGGCATCAGAACCTTATCAAATAAGCCCATAGACATTTAATTTCGAACTTGCGCGCCAAATGCCCCCTCAGAATTTTCCCATCTACTAGCTGATATCAAGTTCATCTTATTATGGGGTCGTTTGGGGCACTGAGTTGCTATAAAATGTCTGGAGTGCATATATCTTATGAGTTTATTTGCCTAGGGAGTTCATGTCTGTGTTTAGGAGTGCATAGTTGCATTGTCTGAGTTCATATGGATGTGTTTGGGGTGCAGAGTTGAGTTCATATGTCAGGAATATCTTATAAGTTCTTTAAACTCTTCATAATATGTTTTTATCATTAGTATTTTTGTTTTGAAATGTTGTTATTCAATAACTCTACCCATTTTTGTTTGAATAGGGTATGGATTGCAATTTTTTCCCCTTTTATTTTAAATTTTTTTTTGTGGTTTCAAATTTTGTTCTTTTGGTAATGACAACAATTGACCAACTACATTTATTGCAAGAATATAATTAAATGAAATGGGAAACCAAAGAGAAATTAGAACTTTTGATTCCAATTTTCGTACATGAATTTCAACATATTATTCTTTTTTTTCTTTTTCTTCTTGTTGCTGCTCTGTAGTTTTCTGTCATTAATTTTTTTGAGTTGAATCTCCCCTCTCATGCTTCAACAATTCCACTTTCAATTTCTCCAAATTTGGAGGATCATCAGAGAGAAAACTGTTGATTTTCATGTCGATTTTCATTTTTATTTGCTAGAAAATGCTCTAGAAAACTAATAGGGCTTGGTACATGTTTGGCAAAAAAAAGTTTTAAAAAACAAGCCCATAGCATAGAGCACAAACTTAATTACTTTTGCAAAAATGACAAAAAACAAGCCCAACTCATGTGATACTCTTGATATATACTAGATATACTTGCTATATACTAGATGTACTTGATATACACTTGATGTACTTGATACACACTTGATATACCACTGATACACACTTGATATACCACTGATACACACTTGATATACCACTGATACATACTTGATATACCACTGATACACACTTGATATACCACTGATACACACTTGATATATCATTGATACAGATTTGATACGTTACTAATATCTACTTTGCTACGCTTGATACACCTATGATATACACTTGATACCATTCTGATATGCACTTGATATACATCTAATATGCACTTGATACACTTGATATGTACTGGTTACACACTTGATATACGTGATATACACTTAATATACACTTGGTACACATTTGATACACACTTAATAAACTTGATATACACTTCATACATACTTGATCTACCAAATATTGGGATTTAAGATAAAAAGATTTTGAATTTTTGTTGAATGATTGAGAAAAAAATATTTATTGTAAAATATAAACCACAAATATGTACTATTATAACCCAAACTAAAATAATCTCAAACACAAACTATCATAACCCATCTATAATAACTTAAGATTATAATAACTCATTCCTTGTCTCAAACATTGCCTAAACAAAATTTTCACGTTTGTTTTAGCTTTAAAGTTGATAAAGATCAACTTATTTACAATAATGTCACATTGATTTATTTACCCAAATGCCATAAGACATATTTACTTATTTTTCATTAAATTAAAAACCTTTAATATTTTGTCATTTTCAACATTTATGTGTATATATTTGTGTTTATCAAATATATCAAGTATATGTCGTGTGTATCACTTGGGTTGGACTTGTTTTTTTGACATATCTGCAAAATGGAAAAAACATGTGACAAGCTTGCAAATCCCTAAACTCAATTTGTCACCCACAACAATTTTCCAAACAAATATCTGTTTTATGGTTTTTTTGTTATTTGTTATTTTTGTTTGTTTTTTCTTTAACGTTTTGTTCTTCCATTCTACTACATACATACTTCTCCAAATTCTTACACTCATTTAATATGTGAATTCATTTTTCATATAACTATTGCATTTAAAGTAGAGAAAATACAACTATTTATATAATCAACAATCCTACAATACACTTTAACAATCCTAGAATGCATGAGTTGAACCACAAAAATTAGGGCTGTCATTAGGGTTTATTTACGTGTTCACAAATAATAGAGACTGAAATTGGTCAATGGAGTTGGTCACGTGAAGGTGGTTGTCGGAGTTGTTTGCTGGAGGTGTCATCAGAGATGGTTGTCGAACTTGAAATTGATCGTCAGATTTGGTTGTTCGAAGGAGTTCATCAAAGTTGTTGTGGAAGATGGATGCTAGAGCTTGTAATTGGTTGTTGGAGTTGAACACACGAAGGTGGTGGTTGGGGACCCAAAATTGGTCGTGAGAAGGTGGTGCTGGAGTTGTCATTGGAGACCAAAATTGGTCGTCGGAATTGTCGATAGAGGTGGTTGTTGAAGTCCAGGGTTGGTCGTCGGAGTTGGGCATGTGAAAGTGGTCGTTGGAGTTGGTTCCCAGAGTGTTACTGGATGGCCAGTGAATGAAACATTGAAAAACATTGGAAGAAAGGAGAGTTGGGGTGAGCTGGTAAAATATACCAACTCAACTCCAACATTTAAAGTTAGTGGCAAACAATGAATTTTGATATATTTTACCGACTCAACTCATGCTGGTGAGCCAAACCCAAGATAAATTTACAAGGTTGTTAATGGACCGTTCATATACAGAGATTTAATTAGGGGTTTGAAATAGTACTTGTAATTTTAAAAGGCCAAAACGAAACTAAAATATGGTTTGTGGTCCCCTGATGATAATTGTATTTTGTACAAAAGAACCGAGGATGCAATCATGCAATTTTAGTTTTGTTTCTAAACCAAGTGCCAGTCATGCTTTGATTTCATTGTCCAGATTCTGAAACGATCTTTCCAAAATACAATGGAATAGAATCCCTGAGCTTAAATTTTCAACTTACTCAGACAGATTCTGATTGCCATAATAATTTTCCATGTACAGGAATCTTGCTTTCTAGAATTTGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGGTATACATTCTTCCTTTTGGAACCCACATTGACTGTGTATTCTTATTAATGCTTCTTATTAAAGCGTATCTAATCTCTCTCCCCCCTTGGAACAGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTCTGCTCTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTGGTTAAATTTTTTTTACCTTCCAAATTTTTTCCCTTGTCAATTTGTTTCTTGTTGTGTGTCTACACATTATAAACTTGTTAAGTAAGTCCCTTTTTGTCATGATATATTTAGGAAAAATTCAGAGGGATGGGTTTAATGGTTGATCTTTGGAGTTAAGCAAGAATCTGGAAGCTGAAAGTGAAAACTTTGTGTTTAAAGGATATTTTTTTTATCAAACATTGCAAAATTATTATTATATTGCAAGAATAATTTGCACTGAAACTTGAAAGGAAATAATTAGTCCAGACTGCATGAAATAATTTGTCATGAGATAGTCTTGTTTCTGTTTTAAAAGAGAAAAACAAGTCCAAACTGCATGAAAGCTAATATTGTCATTTCTGACATGAGAAACTTCCGATAGTATTCTTGGGCCTGACTTGCAATCTCTGTCAAAAGACTATTTCATCAAGGGTTGTACTTTTCTTTTTTTTTCCAAGTAAGGGAAGGAGGCTCAACTTCGTTTTCTCAATGTGCCTGCTCTGTGAAGGTTCCCCCCATATGAACCTAACACAAGTATGCGAAGAAAACACTCCAGTTGACAAATGCAAAGTGAAGTAGAACTTTTACTAGGATTCTGATTCCTAAAGCTTTTGGCTATCTATTGTCCCTTTTGTCAACACTTAGGATTTGAAATTCTAATACAGTGGAACAATTTTCTGGTTAACCGCATTGACGAAAAACCTTTCCTCTATGGAGATGTTAGCAGGTCTTGTCTTCAAGTTGAAAAGTACATTGTTCATGTAGGTTCTTCCATATATGATTTCTTTTGAATATATTAGCATTGGTTTTCGTGGATCAGCATAGTGAAGGTTCATTAATATAAAGTTTGAGAAGAATTTGGACCAAACTCAGTTCTTATATGGAGTTAGAAAATTACTAATGCATAGCTGTTGCAATTAAAGGATTAAAATGTATTCAGCCACTTCTTTTGGTTAGATTTATATTCAAGTCCTCATTCTCAGATTTTTTCCCCTAGTAGAATAGTTTGCTGCAATACATTGTTTATGTGGATATTTATTATTAGGGACTTCTAAAACGGGACTGAACCTGCAAGTGTTTTGTATTATCAACCTCCGTAGAATCAAAACCGTCCCTATCTGATAGACCTACCTCTCTGTGCAAGCACCTGGGCCCATCTGTTTTTCTGATTTCATGGCATCTTCGTTGTCCCACTTTTCATTATATATTTGTATGCTCCATTGTACAGGTTCAAGGTTTATGGAAAGCAAAACATGAAAACATGTCTGAGTTATGTAATGAAGTTACGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGGTCAGTACCATTAATTCTTCTCTATTTGCGTCTCTCACAATGTTGTTTAGTTTGTTTCTGTTTATACTGTTGGGAGCATTACACTTTTGGGATCAAAGGTTCAGTTTAAGTTTAGGTTACATTTGGGTCCTTAAGTTTCGAAACTTAATAATTTTACGCAGGAGGTTTGCAAGTAGCACCGTTGGTCCATCTGTCGGGTTTCGGTTAATTACCAATGGAAGGCTGATGTGACACCTACTTTTATTAGAAAATATTGTCCTCAAATTTTTATTCACTACATAAAAAAAATTTCTTTCTTTTTATTTTCTCTCCTCTCTTTCCTAATTCCTCCAATTTGAACCAGCCGCCTGTTGGACAGTGTCAGTTTTTTTCCATCTTCCCCTTTCGTCTTCTCTTCTTCTCTTTCTCCTTCATTCTAAAATAAATTGAACGAATTCCCCTTTCATTGAAGGTTTTTTCCCCTTCTAATTGTTTAATTATTTTTTTTAAAAAAACAAAACTGGACAAATGGTACAGATCTGGCAGTTGTTGTTGACACTACCGTCTCGAACGAGTCACTGATTACTGATTAGAGAGAAGAAAGGGAAGGGGGAGGATAAATGATTAGAAGGGAGAAGAATTTTTACTGTTAGCTTGGGTCATGTTGAAAGCCTAAGGGTAGTTCAGATTTACTTTGCCCTAATTTTTTTATTCTTTTAATTAGGCTCGTGTTGACTATAAATATTTTCCTTTTGTTCCTTTATTATCATCAGAAAATAATAAGAAACATCTATACTGTGGATTTTCTCTTTACTAGGGTTTCCATGTAGACTTTGTGTTGTTTTCGTTTCTATTTTTCGATATTTACTAATAAAAATTATAATTCTTTGATGAAAAAGATTGGAAAACTGTTTTTTAATTAAAAATTAGTGTCACGTCAATTTTCCATTAGTCGTTAATGGAGAATTTGGCAAATAAATTTAGGGGTAAAATTGTTAGAGTTTGAAAAATAGAAGACACAAATGCAACCTGCACCCAACAACCTCAGAAAGCATAAATGTACTTTTCCCTTCTTGTTTCTTGTGCTCATAAGAATTTAGTGTAGGTTGTAGGTTCCTTACTATTTGAGATCCGAAGCTGGTTAAAATAACTTTGATCCTTAATTTCATTTGTCGCACAATGACAATTCTCATTTTAAAAATTGATGGCAGAGATGTCAAATGACCACTTTCACTTTTGTTGATTTATTGTTATGATTATTAATGGGTCGATTTCATCCATATTTAACTTGTCTAACTCTAACCATACAAATACAGGTTTATACTGTAAGCCTTATTCTAGAAGTTCAGTTTTTTGATAAACCAGTTATCGTAAGTCCAATTAGAGTTTGCACTAAATAAAAATGAAAGAATACAACATACAAGAAAATCAATCTGACAGAAAGGGAGCTCAACTTTGAGAATGAACTCCCAAAATAGTGAGATCGAAGCCTAAAGATACGGACTTCCCATCTTGTTTTTTAACACCTGCTGTGTACTTTAGCTTGGTGTAACTCTCTCATTTCTTTCGTGATTATAATCTTACTACCCTTAGATCCCAATGTAATTACTTTTTTGTAATCTTCATGGCTATTACAACCCTTCTGTCTTTTCTTATTTGTTGATATTCTTACTTGTACGTTCTTTGAAATTCTGACGTTCTGTCATTCATCCTGGAAAGCATCTAAACTCAGAAGCTGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGGTAATACTCTATTGAAATAAATTTTAGTGACTGTATTTTGGCTGGTATGCTCAAGCGAGGTGGTCCTTTCTATTGCAGAGGGCGAAGTCCAGGAGTTTGAAGATTAATGGTTAGAATGCACGGCGGGATATATCTTACAGCATAGAAAGATTGTCTGAGGACTACATTGCCTTTGTAGGCCAATGCTTTGCAGACTACTATTCTTTACCCAAGATTGCCAAGATCTTTGGGGATTGTTTTGGTTTCACCTACATTTCCATGGCCCTGACTTAGCAAACTGATTCTTCTAGTTGTGACAATGAATTAGCATTTATTTTCTTTTTGTTATTCAATAGCATGTTTGGGAAGTTTGAAGCAAAGTGAGATTAACAAACTTGGGGTCACTTGGCATTTGGTTGAAAGTTCATTTGAGGACTAGATTTCAGGATTTGATATTCTTTTTAAATGTTGGAGATGACCTTCAACCTCAAGGAAGGTCGTAGATGCCTTATCCCTTAAATTTACAGAAAGGAGAATGTATTGCTCTTCATCATATTGTCCTGTAAACCCTTCGAAATTTATAGAAGGGAAAATCTATTGCTCTTTCATCATATTATTTTTGCTTGAAATAATTTATGTAACAAACACACTGTTCTGTCAATTTTTTCTCAATTAAGAAAAGAAATTTTTTGCGTACATTTCCTTTGGCACTCTCTCCTTGCTTTGTTTGCTTTTCATGTAGTTTCAACTGTTGTTTTTAG

mRNA sequence

AGCATTTGATCTCTCCTTAAATTCCCTGCAATTTATTTAAGCACACTTTTAATTCCTGGCTTGATGAGCAACAAACCCTTGTTACCTCTGAATTTGACAATTACACCAAAATAACTTATAGATTGCTTGTAGAGACATTTATTTCGACTTGCTACAAGCTTTGGAGAGCGGCTACAAAATTGATAAACTATGAAATGTTTTGTTTCGCTATATGCTAATACTTTAAATCGAAGAAACTATCCTTCGTTAATTTGAAGATTTAAAATGGTTCTGTTGTTTTGCAATTTTCCGAATAATTTAGCCTAGAAGAGAAGTACTCGGAAGAGAGGGAAAGAAGAAGGTGGAGTCTGTGGAGCAGCTTTGAATGGACAAAAAAACCTATTGGACGACATTGATTTAAGCTGGGAATCTTCATAGTGACCGGAAAACTACCCTCTGATGAACTGCTTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATGCCTACTGGACCTCATCCTTTCACAATGTCGCTGTAAAGACTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCCACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCCGTGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGCGCCTTGCACTTTTCATGGTGGAGATACCTCTCTTACAGGTGAGACTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTACCCGAAAATGTTGGGTCAACTGTTTTAACTCCTACATTAAAAGATCCCACGAGGAAACATATTAAGTTGGAAGATTCCATTGTGTCCCATTCAGTATCCTCCAACCGGGAATCTTGCTTTCTAGAATTTGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTCTGCTCTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAAGCAAAACATGAAAACATGTCTGAGTTATGTAATGAAGTTACGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCTGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGAGGGCGAAGTCCAGGAGTTTGAAGATTAATGGTTAGAATGCACGGCGGGATATATCTTACAGCATAGAAAGATTGTCTGAGGACTACATTGCCTTTGTAGGCCAATGCTTTGCAGACTACTATTCTTTACCCAAGATTGCCAAGATCTTTGGGGATTGTTTTGGTTTCACCTACATTTCCATGGCCCTGACTTAGCAAACTGATTCTTCTAGTTGTGACAATGAATTAGCATTTATTTTCTTTTTGTTATTCAATAGCATGTTTGGGAAGTTTGAAGCAAAGTGAGATTAACAAACTTGGGGTCACTTGGCATTTGGTTGAAAGTTCATTTGAGGACTAGATTTCAGGATTTGATATTCTTTTTAAATGTTGGAGATGACCTTCAACCTCAAGGAAGGTCGTAGATGCCTTATCCCTTAAATTTACAGAAAGGAGAATGTATTGCTCTTCATCATATTGTCCTGTAAACCCTTCGAAATTTATAGAAGGGAAAATCTATTGCTCTTTCATCATATTATTTTTGCTTGAAATAATTTATGTAACAAACACACTGTTCTGTCAATTTTTTCTCAATTAAGAAAAGAAATTTTTTGCGTACATTTCCTTTGGCACTCTCTCCTTGCTTTGTTTGCTTTTCATGTAGTTTCAACTGTTGTTTTTAG

Coding sequence (CDS)

ATGAACTGCTTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATGCCTACTGGACCTCATCCTTTCACAATGTCGCTGTAAAGACTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCCACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCCGTGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGCGCCTTGCACTTTTCATGGTGGAGATACCTCTCTTACAGGTGAGACTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTACCCGAAAATGTTGGGTCAACTGTTTTAACTCCTACATTAAAAGATCCCACGAGGAAACATATTAAGTTGGAAGATTCCATTGTGTCCCATTCAGTATCCTCCAACCGGGAATCTTGCTTTCTAGAATTTGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTCTGCTCTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAAGCAAAACATGAAAACATGTCTGAGTTATGTAATGAAGTTACGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCTGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGAGGGCGAAGTCCAGGAGTTTGAAGATTAA

Protein sequence

MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLALTLAEGEVQEFED*

Homology

[Close]

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 237 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKG 296
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 297 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 356
            T   V  DSKLV  Q+ G WK KH ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 357 QANLALTLA 365
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 237 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKG 296
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 297 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 356
            T   V  DSKLV  Q+ G WK KH ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 357 QANLALTLA 365
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 237 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKG 296
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 297 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 356
            T   V  DSKLV  Q+ G WK KH ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 357 QANLALTLA 365
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 239 FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTR 298
           FDGAS+GNPG A  G VL + DG ++    + +G ATNN AEY A++  L++A   GF  
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFDD 133

Query: 299 IHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQAN 358
           I ++GDS+LV  Q+ G W     ++        +L   F  + + HV R  N  ADA AN
Sbjct: 134 IELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALAN 193

Query: 359 LAL 362
            AL
Sbjct: 194 EAL 196

[Close]

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot
Match: P54162 (14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308 GN=rnhA PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.5e-06
Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 240 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI 299
           DGAS GNPG +G G  ++ H+G         +G+ TN  AE+ A++ G+K    +G+  +
Sbjct: 8   DGASAGNPGPSGIGIFIK-HEGKAE-SFSIPIGVHTNQEAEFLALIEGMKLCATRGYQSV 67

Query: 300 HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANL 359
             + DS +V  +   L   K+        E+ +LK  F  F +  +    N +AD  A  
Sbjct: 68  SFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIPGKQNQKADLLAKE 127

Query: 360 ALTLAE 366
           A+ L E
Sbjct: 128 AIRLNE 130

[Close]

BLAST of CsGy5G016490 vs. NCBI nr
Match: XP_004143798.1 (uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus] >KGN51206.1 hypothetical protein Csa_009437 [Cucumis sativus])

HSP 1 Score: 743 bits (1919), Expect = 1.31e-270
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240
           TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300
           GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300

Query: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA 360
           VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA
Sbjct: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA 360

Query: 361 LTLAEGEVQEFED 373
           LTLAEGEVQEFED
Sbjct: 361 LTLAEGEVQEFED 373

[Close]

BLAST of CsGy5G016490 vs. NCBI nr
Match: XP_011655308.1 (uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus])

HSP 1 Score: 696 bits (1796), Expect = 4.16e-252
Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240
           TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300
           GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300

Query: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHL 349
           VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR L
Sbjct: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRKL 349

[Close]

BLAST of CsGy5G016490 vs. NCBI nr
Match: XP_008465682.1 (PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo] >KAA0040578.1 RNase H family protein, putative isoform 2 [Cucumis melo var. makuwa] >TYK05621.1 RNase H family protein, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 683 bits (1762), Expect = 1.24e-246
Identity = 346/378 (91.53%), Postives = 358/378 (94.71%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 QANLALTLAEGEVQEFED 373
           QANLALTLA+GE+QE ED
Sbjct: 361 QANLALTLADGEIQESED 376

[Close]

BLAST of CsGy5G016490 vs. NCBI nr
Match: XP_038889960.1 (uncharacterized protein LOC120079705 [Benincasa hispida])

HSP 1 Score: 643 bits (1659), Expect = 4.89e-231
Identity = 325/375 (86.67%), Postives = 349/375 (93.07%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHN--VAVKTTALDSLCSRFG 60
           MNCFSQVSTYTR IFRRT LV  ASTSI+G SN+YWTSSFHN  VAVK TA+DSLCSRF 
Sbjct: 1   MNCFSQVSTYTRAIFRRTTLV--ASTSINGYSNSYWTSSFHNHNVAVKATAIDSLCSRFR 60

Query: 61  LRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSS 120
           LRCYS+RK RK     SPSPKLDSEPP ESEMGDFFVVRKGD++GVYKSFSDCQAQIGSS
Sbjct: 61  LRCYSSRKLRKA---ASPSPKLDSEPPTESEMGDFFVVRKGDIIGVYKSFSDCQAQIGSS 120

Query: 121 ICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLT 180
           ICDLPVS++KGHSLPKDT+EYLASVGLKNALYTIKAADMRPDLFGSL PCTFH GDTS+ 
Sbjct: 121 ICDLPVSLYKGHSLPKDTQEYLASVGLKNALYTIKAADMRPDLFGSLVPCTFHDGDTSIK 180

Query: 181 GETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLE 240
           GE SGQDAIKKR REAIV EN+GS+VLTPT KDP+RKH+KLEDSIVSH++SSNRESCFLE
Sbjct: 181 GEASGQDAIKKRPREAIVSENIGSSVLTPTSKDPSRKHVKLEDSIVSHALSSNRESCFLE 240

Query: 241 FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTR 300
           FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK AL+KGFTR
Sbjct: 241 FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALQKGFTR 300

Query: 301 IHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQAN 360
           IHVQGDSKLVCMQVQGLWK K+EN+SELCNEV KLK+KFLSFE+NHVLR+LNSEADAQAN
Sbjct: 301 IHVQGDSKLVCMQVQGLWKVKNENISELCNEVIKLKDKFLSFEINHVLRNLNSEADAQAN 360

Query: 361 LALTLAEGEVQEFED 373
           LA+TLA+GEVQEFED
Sbjct: 361 LAITLADGEVQEFED 370

[Close]

BLAST of CsGy5G016490 vs. NCBI nr
Match: XP_008465684.1 (PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo])

HSP 1 Score: 639 bits (1648), Expect = 1.43e-229
Identity = 323/352 (91.76%), Postives = 333/352 (94.60%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 347
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 350

[Close]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL
Match: A0A0A0KTZ9 (RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=4 SV=1)

HSP 1 Score: 743 bits (1919), Expect = 6.33e-271
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240
           TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300
           GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH 300

Query: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA 360
           VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA
Sbjct: 301 VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLA 360

Query: 361 LTLAEGEVQEFED 373
           LTLAEGEVQEFED
Sbjct: 361 LTLAEGEVQEFED 373

[Close]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL
Match: A0A5A7TCE2 (RNase H family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00790 PE=4 SV=1)

HSP 1 Score: 683 bits (1762), Expect = 6.01e-247
Identity = 346/378 (91.53%), Postives = 358/378 (94.71%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 QANLALTLAEGEVQEFED 373
           QANLALTLA+GE+QE ED
Sbjct: 361 QANLALTLADGEIQESED 376

[Close]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL
Match: A0A1S3CPT7 (uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 683 bits (1762), Expect = 6.01e-247
Identity = 346/378 (91.53%), Postives = 358/378 (94.71%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 QANLALTLAEGEVQEFED 373
           QANLALTLA+GE+QE ED
Sbjct: 361 QANLALTLADGEIQESED 376

[Close]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL
Match: A0A1S3CPG2 (uncharacterized protein LOC103503315 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 6.92e-230
Identity = 323/352 (91.76%), Postives = 333/352 (94.60%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 347
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 350

[Close]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL
Match: A0A1S3CQX0 (uncharacterized protein LOC103503315 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 8.03e-230
Identity = 323/352 (91.76%), Postives = 333/352 (94.60%), Query Frame = 0


Query: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESC 240
           TSGQDAIKKRSREAIV ENVGS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 347
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 350

[Close]

BLAST of CsGy5G016490 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 306.6 bits (784), Expect = 2.7e-83
Identity = 175/382 (45.81%), Postives = 237/382 (62.04%), Query Frame = 0


Query: 1   MNCFSQVSTYTRV-IFRRTNLVFAASTSIHGCSNAYWTSSFHNV----AVKTTALDSLCS 60
           MNC S   +Y  + + +R++ V          S+  W   F  +     +K  A+ S+  
Sbjct: 1   MNCLSHARSYIALGLLKRSSYV----------SSIPWNECFFYMPSKSCLKPVAVSSVFG 60

Query: 61  RFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQI 120
              +  YS+R      K  S +        V+ E   FFVVRKGDV+G+YK  SDCQAQ+
Sbjct: 61  ICSVHSYSSRSKAVKSKMLSST----VVSAVDKEKDAFFVVRKGDVIGIYKDLSDCQAQV 120

Query: 121 GSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSL--------AP 180
           GSS+ DLPVSV+KG+SLPKDTEEYL+SVGLK  LY+++A+D++ D+FG+L        AP
Sbjct: 121 GSSVFDLPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLRASDLKDDMFGALTPCLFQEPAP 180

Query: 181 CTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHS 240
           CT    +   T ET  +D  K +   A +              DP  K  K+E      S
Sbjct: 181 CTVKVSEDETTSETKSKDDKKDQLPSASIS------------YDPLEKLSKVEP-----S 240

Query: 241 VSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLG 300
              + E+CF+EFDGASKGNPG +GA AVL+  DGS+ICR+R+GLGIATNN AEY A++LG
Sbjct: 241 AYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILG 300

Query: 301 LKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 360
           LK A++KG+  I V+GDSKLVCMQ++G WK  HE +++L  E   L NK +SFE++HVLR
Sbjct: 301 LKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLR 351

Query: 361 HLNSEADAQANLALTLAEGEVQ 370
           +LN++AD QANLA+ L EGEV+
Sbjct: 361 NLNADADEQANLAVRLPEGEVE 351

[Close]

BLAST of CsGy5G016490 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-76
Identity = 162/370 (43.78%), Postives = 226/370 (61.08%), Query Frame = 0


Query: 1   MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGL 60
           MN FS+  +Y + V+FR+++ V          S+  W   F+  ++K++   +  S   +
Sbjct: 1   MNRFSRARSYISLVLFRKSSYV---------TSHIPWNQCFY-TSLKSSLKPASVSVSSV 60

Query: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSI 120
            CYS+R      K +  S  +      + E   FFVVRKGD+VG+YK   DCQAQ+GSS+
Sbjct: 61  HCYSSRSKTAKSKMSKSSVSVSDS---DKEKDAFFVVRKGDIVGIYKDLIDCQAQVGSSV 120

Query: 121 CDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTG 180
            D PVSV+KG+SL KDTEE L++VGLK  LY  +A D++ D+FG+L PC F         
Sbjct: 121 YDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLKEDMFGALTPCLF--------- 180

Query: 181 ETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEF 240
               QD +                   P+      K  +LE      S  ++ E+C +EF
Sbjct: 181 ----QDQL-------------------PSASMSVEKLAELEP-----SADTSYETCIIEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI 300
           DGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I
Sbjct: 241 DGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKI 300

Query: 301 HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANL 360
            V+ DSKLVCMQ++G WK  HE +S+L  E  +L +K LSFE++HVLR LNS+AD QAN+
Sbjct: 301 KVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQANM 320

Query: 361 ALTLAEGEVQ 370
           A  L+EGEV+
Sbjct: 361 AARLSEGEVE 320

[Close]

BLAST of CsGy5G016490 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-76
Identity = 162/370 (43.78%), Postives = 226/370 (61.08%), Query Frame = 0


Query: 1   MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGL 60
           MN FS+  +Y + V+FR+++ V          S+  W   F+  ++K++   +  S   +
Sbjct: 1   MNRFSRARSYISLVLFRKSSYV---------TSHIPWNQCFY-TSLKSSLKPASVSVSSV 60

Query: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSI 120
            CYS+R      K +  S  +      + E   FFVVRKGD+VG+YK   DCQAQ+GSS+
Sbjct: 61  HCYSSRSKTAKSKMSKSSVSVSDS---DKEKDAFFVVRKGDIVGIYKDLIDCQAQVGSSV 120

Query: 121 CDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTG 180
            D PVSV+KG+SL KDTEE L++VGLK  LY  +A D++ D+FG+L PC F         
Sbjct: 121 YDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLKEDMFGALTPCLF--------- 180

Query: 181 ETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEF 240
               QD +                   P+      K  +LE      S  ++ E+C +EF
Sbjct: 181 ----QDQL-------------------PSASMSVEKLAELEP-----SADTSYETCIIEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI 300
           DGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I
Sbjct: 241 DGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKI 300

Query: 301 HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANL 360
            V+ DSKLVCMQ++G WK  HE +S+L  E  +L +K LSFE++HVLR LNS+AD QAN+
Sbjct: 301 KVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQANM 320

Query: 361 ALTLAEGEVQ 370
           A  L+EGEV+
Sbjct: 361 AARLSEGEVE 320

[Close]

BLAST of CsGy5G016490 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 5.2e-74
Identity = 142/292 (48.63%), Postives = 193/292 (66.10%), Query Frame = 0


Query: 86  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGL 145
           +E E   F++VRKGD++GVY+S S+CQ Q GSS+    +SV+KG+  PK  E+ L+S G+
Sbjct: 5   MEDEKDAFYIVRKGDIIGVYRSLSECQGQAGSSVSHPAMSVYKGYGWPKGAEDLLSSFGI 64

Query: 146 KNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVL 205
           KNAL+++ A+ ++ D FG L PC      +S  GE+  + +  KR       +++GS   
Sbjct: 65  KNALFSVNASHVKDDAFGKLIPCPVQQPSSS-QGESLNKSSPSKRL------QDMGSGES 124

Query: 206 TPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLR 265
                 P +K +K+E+ ++    SS          +SC +EFDGASKGNPG+AGAGAVLR
Sbjct: 125 GSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCTIEFDGASKGNPGKAGAGAVLR 184

Query: 266 AHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWK 325
           A D SV+  LREG+G ATNNVAEYRA+LLGL+SAL KGF  +HV GDS LVCMQVQG WK
Sbjct: 185 ASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWK 244

Query: 326 AKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLALTLAEGEVQ 370
             H  M+ELC +  +L N F +F++ H+ R  NSEAD QAN A+ LA+G+ Q
Sbjct: 245 TNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQ 289

[Close]

BLAST of CsGy5G016490 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 5.2e-74
Identity = 142/292 (48.63%), Postives = 193/292 (66.10%), Query Frame = 0


Query: 86  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGL 145
           +E E   F++VRKGD++GVY+S S+CQ Q GSS+    +SV+KG+  PK  E+ L+S G+
Sbjct: 5   MEDEKDAFYIVRKGDIIGVYRSLSECQGQAGSSVSHPAMSVYKGYGWPKGAEDLLSSFGI 64

Query: 146 KNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVL 205
           KNAL+++ A+ ++ D FG L PC      +S  GE+  + +  KR       +++GS   
Sbjct: 65  KNALFSVNASHVKDDAFGKLIPCPVQQPSSS-QGESLNKSSPSKRL------QDMGSGES 124

Query: 206 TPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLR 265
                 P +K +K+E+ ++    SS          +SC +EFDGASKGNPG+AGAGAVLR
Sbjct: 125 GSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCTIEFDGASKGNPGKAGAGAVLR 184

Query: 266 AHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWK 325
           A D SV+  LREG+G ATNNVAEYRA+LLGL+SAL KGF  +HV GDS LVCMQVQG WK
Sbjct: 185 ASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWK 244

Query: 326 AKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLALTLAEGEVQ 370
             H  M+ELC +  +L N F +F++ H+ R  NSEAD QAN A+ LA+G+ Q
Sbjct: 245 TNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQ 289

The following BLAST results are available for this feature:

BLAST of CsGy5G016490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P9WLH5	1.8e-18	43.41	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	1.8e-18	43.41	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	1.8e-18	43.41	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
Q9HSF6	1.6e-16	40.65	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P54162	4.5e-06	30.16	14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308...	[more]

BLAST of CsGy5G016490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143798.1	1.31e-270	100.00	uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus] >KGN51206.1 hy...	[more]
XP_011655308.1	4.16e-252	99.71	uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus]	[more]
XP_008465682.1	1.24e-246	91.53	PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038889960.1	4.89e-231	86.67	uncharacterized protein LOC120079705 [Benincasa hispida]	[more]
XP_008465684.1	1.43e-229	91.76	PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo]	[more]

BLAST of CsGy5G016490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTZ9	6.33e-271	100.00	RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=...	[more]
A0A5A7TCE2	6.01e-247	91.53	RNase H family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CPT7	6.01e-247	91.53	uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CPG2	6.92e-230	91.76	uncharacterized protein LOC103503315 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CQX0	8.03e-230	91.76	uncharacterized protein LOC103503315 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CsGy5G016490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24090.1	2.7e-83	45.81	RNase H family protein	[more]
AT5G51080.1	2.5e-76	43.78	RNase H family protein	[more]
AT5G51080.2	2.5e-76	43.78	RNase H family protein	[more]
AT3G01410.1	5.2e-74	48.63	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	5.2e-74	48.63	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 239..360 e-value: 8.0E-29 score: 100.0
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 231..362 score: 15.669822
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 235..365 e-value: 1.6E-36 score: 127.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..87
None	No IPR available	PANTHER	PTHR46387:SF14	PUTATIVE-RELATED	coord: 104..369
None	No IPR available	PANTHER	PTHR46387	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 104..369
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 235..361 e-value: 1.58828E-51 score: 166.109
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 235..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G016490.2	CsGy5G016490.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity