CsGy5G015955 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G015955
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 22188969 .. 22190692 (-)
RNA-Seq ExpressionCsGy5G015955
SyntenyCsGy5G015955
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGCAGAAGGGGTTTGGATGAAAACACTCTATCAGAAATGAAAAAAGATTAAGCATGCATTATGAAAAGAAAAAAAATGTATAGTTTTTATGAACACAACGTTTATAGTTCAAAATTCTTGTTGAGGATACAAAACACGAACTGATCGTAGACCACCACGAGAATCTTTCCATCCATTCTCTGGCCTTAGAACGGTATGAAAAATTTGATGAGCAATGAATTTAGCGTAGTTTTGTAGAGAGAGTTTTTAATTTCCAAAAAATATATATAAAAAAATCTCAAGCAGAATTAATCTCATCAATCCTTTTCCTTTCATAGACAAAAATCCGATGCTACTCAAAATTATTTATTGTTACTCAAGTCCCACTAATTCTCTAATAAATTATTGATTTGTGGTTTAATCACTAAATCAAGTCCCTCTCGAGCCAATAAAAGGATATGACTCTTTGTTTAATGCCTCAAGTTAGCATTTAAGAATACAACTAATCTACTATCTTTAATAATGGGTAAAAGTGAATTCATTTTTGCATCATATGTCCCCAAGTGTCTATTTGGTCTTAACTCTAAAATGAGATGTTTATCGAATAAAATCCAACTACTTATATAAAATATTGAAAAAGTGACTATACGAGAAAGACAGTGGAAAAGATATTTGAAAGTAATATTGGAGAATATAAAATCTATGGACATTCATGTATAATTTAAATAGTTAAAACAATAATTACAATTTCTTCTTATTACATGGGAGTTTTAGAAAAGAAAAATTGTGTATATATTAAAGGAACATATATTCACATTTGAATTTTTTCTTTAAACAATTAAAAATCTTATTTTAAAGATAAAAATTTAAAATAGAAAAGAAGAATTTGCAAAGAAGAAAAACCTAAACCCTATCGTCCGTCCTTCTTTTTTCCCCAATCCCACTTCTTCAGATTTCTTACCGCAGTCGCACGCCAACGCCCCTCACCGGCGAGCTCTCTCCATTTCCCTCTCCGCCGCAGCCACTCGCCAGCACCCCTCCACCATCCTAACGGTTTTTTTCCTTCTTCTCTTCCTATATATATATATCTGCTACAACCGTACGCCGGCGCGCCACCCCATTCTTCTGCCGCAGCCGCATGACTGCTACTAACTTCTTTTGCAGCTGCCCCTCGCTGTTGTTCACTCCAATCTTCACTTGCTCCCTCCATCTCTCACTCGCTCGCCGTTGAGGTTTTTTCGGTTTAGCCAACTCCGGGTAAGTTTCGAATTAGGTCAATTTACATTTTAAATCCTGCCATTAAACAGTCAAGCATATTTATGGAATATCTTTATGACTCAAGATATCCTTCAAGTTCCTTTTTTGGATTCCAGACTGCTGTCGTATCGTTTTGGATTATTTACTGGGAGATTGAGTCGGACTGTTCCCTTGTTGAATTTCGTACATGCATGTACACGTCATTTCTTAGAGACATGTACACATAGGCATAACCCATCATGGGTTGGCCTGGTGATAAACTGGAGCATGGCCTTTGGTTGAAATATACTTATAAAAAATGCATTGATATATATATATACACCCTTCTTTTTTTGTGTTTTGCATATCTTGCCAACAATTTCTGGGTTTTATAAAACAAGTGTAATTATACTTGAGTCCATTCTTAATAAAACTTCATTACCTTTGTTTATATGTGTTTATTTATCTATGTTTTAGTCTCAGGTGTTGCATAAATTCTTTTGA

mRNA sequence

ATGCAAGCAGAAGGGTTCAAAATTCTTGTTGAGGATACAAAACACGAACTGATCGTAGACCACCACGAGAATCTTTCCATCCATTCTCTGGCCTTAGAACGAAAAGAAGAATTTGCAAAGAAGAAAAACCTAAACCCTATCGTCCGTCCTTCTTTTTTCCCCAATCCCACTTCTTCAGATTTCTTACCGCAGTCGCACGCCAACGCCCCTCACCGGCGAGCTCTCTCCATTTCCCTCTCCGCCGCAGCCACTCGCCAGCACCCCTCCACCATCCTAACGCTGCCCCTCGCTGTTGTTCACTCCAATCTTCACTTGCTCCCTCCATCTCTCACTCGCTCGCCGTTGAGGTTTTTTCGGTTTAGCCAACTCCGGGTGTTGCATAAATTCTTTTGA

Coding sequence (CDS)

ATGCAAGCAGAAGGGTTCAAAATTCTTGTTGAGGATACAAAACACGAACTGATCGTAGACCACCACGAGAATCTTTCCATCCATTCTCTGGCCTTAGAACGAAAAGAAGAATTTGCAAAGAAGAAAAACCTAAACCCTATCGTCCGTCCTTCTTTTTTCCCCAATCCCACTTCTTCAGATTTCTTACCGCAGTCGCACGCCAACGCCCCTCACCGGCGAGCTCTCTCCATTTCCCTCTCCGCCGCAGCCACTCGCCAGCACCCCTCCACCATCCTAACGCTGCCCCTCGCTGTTGTTCACTCCAATCTTCACTTGCTCCCTCCATCTCTCACTCGCTCGCCGTTGAGGTTTTTTCGGTTTAGCCAACTCCGGGTGTTGCATAAATTCTTTTGA

Protein sequence

MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSDFLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRFSQLRVLHKFF*
Homology
[Close]
BLAST of CsGy5G015955 vs. NCBI nr
Match: KGN51171.1 (hypothetical protein Csa_009295 [Cucumis sativus])

HSP 1 Score: 254 bits (648), Expect = 6.03e-85
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD 60
           MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD
Sbjct: 1   MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD 60

Query: 61  FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF 120
           FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF
Sbjct: 61  FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF 120

Query: 121 SQLRVLHKFF 130
           SQLRVLHKFF
Sbjct: 121 SQLRVLHKFF 130

[Close]
BLAST of CsGy5G015955 vs. ExPASy TrEMBL
Match: A0A0A0KTX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G471100 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 2.92e-85
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD 60
           MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD
Sbjct: 1   MQAEGFKILVEDTKHELIVDHHENLSIHSLALERKEEFAKKKNLNPIVRPSFFPNPTSSD 60

Query: 61  FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF 120
           FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF
Sbjct: 61  FLPQSHANAPHRRALSISLSAAATRQHPSTILTLPLAVVHSNLHLLPPSLTRSPLRFFRF 120

Query: 121 SQLRVLHKFF 130
           SQLRVLHKFF
Sbjct: 121 SQLRVLHKFF 130

The following BLAST results are available for this feature:
BLAST of CsGy5G015955 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G015955 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51171.16.03e-85100.00hypothetical protein Csa_009295 [Cucumis sativus][more]
BLAST of CsGy5G015955 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTX12.92e-85100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G471100 PE=4 SV=1[more]
BLAST of CsGy5G015955 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G015955.1CsGy5G015955.1mRNA