CsGy5G015460 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G015460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Location	Gy14Chr5: 21556745 .. 21570449 (-)
RNA-Seq Expression	CsGy5G015460
Synteny	CsGy5G015460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATTTATTTTCCATGGTTGTCAAGTTAGCTGAAACTGTCCTTCCCTCAACGATCGTAAGCCCTTCTTCTTCCCTAAAACCCTATACACCAGCAGCCACTTGAGCCCTGCTCCGCCACTGCACGCTGTATTCTCAGCCTTCCGCCGTCACTCCCTCTCATACTCTCTCGCCTTCTCGAGCAAACACATCCACTCATCTTTCTTCTCTTTTTCTCCGAAACAGTATTCATCCCCTAACCCGTGCCGTTGTTGAGATAGCGCTTCCGCCGCTCATTTTTCAGGTTCCCATCGTTTTGTTTTGTTTTTTTTTTTGGATTTCGTTGGTTTATTCTTTTCATCTCCGAAGAAGAAAATCGATGTTCAACCAGTCTAATTTAAGTTTAAGAGATTAACTGAGCAAAACAGAACTCACCTATAGTTTTGTTCAGTATGAGAATAATCGAAAAGCTGTATTTGAAAGGATTTGCAGTATAAAAAACAGCAAAATGCAATGAACAAATAAAAATAGCTGCTGTCTGTCCCCGGTTCAGTGTTGCATCTGGCAGCCGTCTTTCTTTGTGTTCTTCTTTTCAATGCAACTTAAATAAGTGCACATGAGTGTGATTAAATCCATGATTATCTAGTTGATGTATGCTTTTTTTTGAAGTTATTTTGTTTTTGGTTTATTTATGTGAAGACTCTCGGTTGGGGTTTGGCTAATAGTTCAAAGCAATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTATATGAGAAAAAGCGGAAGATTAGAGAAGCCTTGGAAGGTATTACACTCTCTTTGCTTGATTTTGTTCCTCCCTCAAGTGGATGAAACAGCATTGATCAATAAAAAAGGAGGATGAAATAACCAACTACTAATAAAAAGAGTTGCTATTAACTTTTCATTTAACCTCTATATTGAAGATATAATACTTACGAAAATGGTTAGAAGGAATGCTCAATTGGTGGAAACCAAAAAAAGATTGAATCGGAAGTAACATGAGGAATTTGAAAATATGCATGTGGCTTTTTTTTCAACTGGCTCAAAGCTCCTAATTTTGCAATTATGAACTTTAAGCTCAATATTCTGTGATTTTTTTTTCCTGCAGAGGGAAAACCCTTTCCTACTGAACTTCGAAATGAGGAGGCAGCACTTCGTAAAGAAATTGAACTTGAGGATGAACTCACAGCAGGTAATTTTCTCTAACTATTCTTCAACTTAATATGGACGATTAACATCTTTTGCTGTTCCCTGCCTTCTCCAAAGTATTTGCATCATTTAATGAAGAAAATGAACGAGATTGGCATCTTCAACTTAATGGCTTATATGGGATCTTGATCCTCATTCTCCAACACAATACCAGTGGTTTATGATCGTTCTTTTTACCTTCTTTCTATCCCTTACAAGTTTTAAACATTTCTTTGTGAAAATGGAGTTCAATCTTACGAGTTCACATGAGAGCTTTTTCAGTCATAGTATGCAAAAAAAAAAAAAAAGTCTTCACTAGCTTAGATGGTAAGTTATGGAATTTTTTATTTTTATTTTATTTAATTAGAAGATACAAGAAACGAGAAAAACTTGTTTTTCATACAGGGGCAAATTCTTTTGTGTGTTTTTTTATATTCGTTAGTGTTCGTGCCAGCTTATGCGTACCTCGACTAATCTTTACAGCACAACCTGCCTGACCATACAATATTTGGGTGTCAAGGAAACTTGTAAAAAATTAATTCTTAAGTAGGTGTCTCAATTGATGGGTAATATCTTATTAATTTTATTTTTATGAATACTAACTTTCATCAAGTTGAGACGGTATCAGTTTCTTTGGATGGAACATACTTGGAAAAGAGCATAACCACACCAATGCCCATTGAACGATAAGCCTACAAAAATGGAAGGTTTAAATAAGGATCCTTTTGGTTGAAAAAATCTTAGAGCATAACCGGTGGTTAGATGCATTATGGCTATAACAAGGTCATTTCATTAAGGGTGGATGGAGAGTTTTTGAGAGACGTTGGATACTTTTAAGAGGAAAGTAGGAGGGAAGAAGGATCTGGGTAATTAAGCTGAAAAAACTGTGAGGGTACTAAGAAGGGCTGTTTTGGGAATAGTAGCCGAGTGAGCATATGATGATAGTTTGTTAGAGACAGTTTGATTATTTATTTATTTGTTTTTTTAGAGAAGAAACATTTCATTGATGAAATAAAATTGGGAGAACCCCCAAACACCTAAAGGTTATTAAGATAAGTATTTCCAATTGGAAACCAAGTAAGAAAGGCTCAAATGATTAAAAGGAGGCTTAATTTTGCACCAATACAAAGCTGTAGAAAGAGTAAAATCTAAAAAAGGTTAAAACTAGAAGAATTATCTCTGAAAAGATGTTATTACGTTTGCTCCACAAATTTCAGAAAAAAACACGAACAATAGCCAACCAAATAGTCCTTTTAGTGCCATGAAAAGGATGACCAACCAACAAAGAAGCAAGGTTGTCAAGCATATTTGAAGCAAAAACAGTTAACCAACCAAAGGCCTAGAACATGGTATGCCAAAACTGTGAAGCAAATGGACAATGCGTAAAGAGATGCACGGCATATTCTGAATGATTATGACACATGTAGCAGCAAGATGCGGAGATGGGCATATAGAGGCAGTTTGCTTATAAATAGGAGTCAGGGTTTGTAGGGGAGGTCATAGTTTGTAAGTCAGTTTCAAGTGTGTAATGATTGTGGGAGAGATATAGCTCTCTTGAAAGGCAATTGATATTGCATATTAACTATTTTTGGTGTTTTCGTATGTTTTGGTGTCCTAGGAGTAATAATATTTGGGTAAGGTAGTGTGCAAAGCACATACTTTTTCTTGGGGAAGAGTGGGGTTTTTGAAGTTAAATAGAGGGATTGTGAAGAAGCTAGATATCTGTTACATGATTAATGGGTACACTATTTTGGAAGTGAAGATAATTTTTGGGCTACCGAGTGGCCATGTGAGGCACCGAAGTCTAAATGTGTCTATTAGAAAGCCTTCTGTAGCCCATCTCATTTTCGCTGTATGCTTCAGTTTCCCAGTTACGCTACATAATTTCTAATCAACACAATTAGTGTGTTGCACAATCATTGAGTTAATGGTTTTTTTCTAAAAAAAACCTCAAGGACACACTTGTACAACCTAAAGAACTAATTCTGTTCAAGTAAGATCATTGGAGTTAATGATTGATATTTGTTGGGTGCAAAATTGAAAGCTAAAAAACCAATAGACACATGCTTGAAAGTTCAGTACCAAATTTGTAAGTTGACCTTTATTTTAATATGGTTTTTTATTCTCTTACCATAGAGGTGGAGGAGAAACATCAAAGTAAAATGGTCAGTGATGTTTTTGCAAATTGCTTATCTTGGTCTTTTTGAATCTCTATTCAAAGGCCTCTTTATTTTATGCTGTCCCAATTATTAACAGAACTCTTGATTCTTAATGTTAATTGTAAGTGCAAGTTGGTTTCTAAATTTTTTTGCTAATGTACGGCTGTCTCTTGCCTCTTTGTATGTATCAAATACAGTTCCAAGGACACACATTGATGATGAGTATGCAAATGCTTCAGAAGTTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGTTGGTATACCTATCCTTTTCTCCTTTGTTACTTCTCTAGTTGATAGATTCAAGCGTATAGTTTTTGGCCTTAACCAGAGTTTTATCTGGAATCTGTACACAGGAACTAAAAATTGTTTTTCCCAATGCACAACGAATGAATCGTGGTGGTCAGGTTAGTATTAATTTTGGCTACCTCATTTGCTTTTTTACCATCAGTTTGTTTACCATTTAGCCATTGATTTCGAGTTGGAACTTGTCATTCTTTGAAGCCAATTGAGAAAGTCTTGTGTCATTGGAGCTTTTTTTGACTTAGGTATAATTTGTTATTTGATTGTTGATACTTAATTACCCGGTCGACAGTTTAAAATCAGTATGGAAGAACAAAAACCATTACAAAAGATAGTCCAGCAAGCAGCTTCCCTAGTGTGCAATTCAAATCCCGCCTCTCCTTGTTTATGTATTTACAATAGGACTTACAATTGGTCCAGGCAGGCCCATAAAGAGTTGCTAATACTATATTTTTCCCATTTAAAAGATTATAGAAACTAAATATTATACCAATGACTTGCAAAATCAGAAAATATGGAAGAATACCCTATATTTCCACTTGTGTAGTTAAGGTGCATTTAAAGTCTGTAGTTAAGGTGCATTTTAAGACAATCTTATAGAGAAGCGGAAGTAGAATGTGTTGTTGGTGGTGGTATACTTATCTCATTCTCATCATTTGTAGACCTTTTGTTTGATTAAAATGGTTTGTTGTTTCTTAGGTGATCTCAGAGATTATAGAGACCTGTCGTGCTCATGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATCAGCCATCTTCCATTTGGTCCAACTGCCTATTTTGGATTGTTGAATGTGGTAAGTGTTCTTTTGGAATTCATTTTTCAAAATTAATGGTTTTTGGCACTAGGTGGCTGCACATTGGGCTAGTAGACTAACCATCTTTTCCAATTGAGGTTACAAGACATGAAATCAGGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACGAAGGTAAGAGACATGTTTTGAATGATACAACATCACGTTGTCATTTGACATTTCATGAGTCTTTGCCACTTTCAACGATGTGTTCTTTATTTTGATATTTGTACTGGGCTTCAACATTGAATGATGTTAGACTGCCGAATTTATATTTCATAAAATGAAAGAGACTGAACTTGAAAATGAAAACTTTCTGGTGTACATTATTATCAGCCATTCTTTCTTCTAACCTCCAAGTTAATTTTTTCAAAGTAAATAACGTCTACCTTTCAGAGTCACAATTTTCTTAATATTGCTATTATTGACATGCTGGTGCTATTGTGTCTTAATCTTATCATCATTTTGTTAGCTAAACTCCTTGGATTTTCTCCAATATGGATGTTTTATTGTTTACTTTTCCCTTCCCACATAAGATTCTGCCATATGTTCTATTTCTATTTTCCACCATTTCCCATGTGTATGTGGTTGCATGTTAAGGACATAAATGCCTACATTTCTCTCGTTCTACCATTATGCAAAGATTGTTTTTCCTTTAGAGCAATTACTTAGGTAAAGATAAATTGTTATTCAGTGTCTTCTCTAAATTGCATTTTTTAATTATGATTCTAATATATTTAATTGTTCTATTCTTGATAGTTGGGTGAAAGGACGGCCAATATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGTTGGTTGACTAAAGTTTTTCCCTAGAGAATATTAAATTGGTGATGATGAACGTGATGGTGATACTTGGCCTTAGTTTTGGATTGCAGTACTTTTAGAAAGACAAGTTATGACATAAAGTAAATCAGTGTTTAGTGTTTGGTAAAATAATATTAAATTGTTGTGATTTAGCTATATTCACCAAAATAAGTACATTATTTTCGTATCGATATTTAATATCTATTTTACTATAAGTTTCGTTTACTTTCTTGAAAATAAAATGTTAGCAAATTTATATGCTTTTATTTGCAAGTTATATTTTATATTGTTTAATCTAAATTATTTGATAAAGACAATAGTTGATTGTCATTGATTAGAAAAAAATCATTGAATCAATCATAATTATATTAATTAAATTGAATTATTAGTTTACTTATAGGCAGAAACCTTGACGTGGAACTAAGCCACTTTAGAGAAGAAAGAAGAAAGTATCTAATCCTGGAATTCCTTATTTGGCAAAATTGAACCTACAGCCTTTTCAGAGGGAGCAGAGTTGTCTCCTAGTTTCAAATTCTCAGTGTCATTTGTGGATGAAGCCTTGGAATTATCGTTTGGGTCTTTTTTATTTGATTGGAAACCCTTTTATAGTCTCTCCCTTTGTTGTGGGTTATAGTTTTATATCATCTTCTTCACGTATTGAAAAAGACAAGGAGAATCAGAATCTCTTTATGCAAAATAAAAAGTGAGTTTGCTGGGAGATGGGAAAGTTTACGCTAGATAGAAAAGAATTTAGGGTCGGTTCTGCAGGGATTGATAGGAAGATTCATATTGAGAAAAGGAATGGTTGAAAATTCGGTAAGTTGGAACTGGATGGGGGAACTGCAGTGTGGGTAAGGGACTGTTTGAAGGCAGCCGCGGACGCGAGTCACTCTACCTGATTTTGGGAAGAAGAAAGTTAAGCTTAGCCATAGACTATTTTCAGGTGCTAGAGAATAACAGAGGTAGATTTGCTATTATTTCACTTGAATATTTTAAAGGTAGAAAATTGAGAATTTTCATTTCGGAAGGTAGCAGAGGAAGTGGTTGGCGCTCATTAGCAAAGGAGATCTCGGCGTTCCTTCTAGGTGCAAATTTAGGTTCTCAGAAGGCTAGCAATGAATCCCAAATTCAAAGGACTCAATCAGGAAAGAAAAAGAGGGCTCTTAGCCTTGGATTGTCAAAGTGAAGGGTAACAGAAAAAAAAGGTGGGCAATCATACACAAGAAACTTCCAGAGTGAAGGACAAGAGGTAAAAGCGGTAAAAGGAAAAAGTGATGGACTTTTCATTTAAATGCCAGGCTATGATTATTATAAAAAAATTCAAGGCCTCGACTGATTGGGGAGTTTTAAAGCAACTTTTTGAAAAACCTCCATATATTTGTTGTGGTTTCAAGGTCTTTTGCACAAATCTGGCTGCAGGGATTTGTGGCTTAGTTTTAGAGGCGAAGGAGTTGATTCGACTCGAATCATTGCTTCAAAATCAAGATTTTTTGTTTCAACTTGGGATTTTCGTGTTATTGAAGGGCAGAGAAAGCAGGAATTTAGGGGAGGTTCAGTCACGGCGTTAGACGTCCCTCCCTTTTTTGAGAACAAAGGAGATAATCCTTCCCTAGTGTCTTGGTGTGGGGGTCGTGCCGTGAGGATGTGTATCCACTGGAGTCCAACTGGGCTTAAGGAAGTGAGTTTCAGGGCGGAGGTCAAAGAAGATGGTTTTATTTTGGTGGGATGCATTGTCAACCATTGGGACTTCTTCTTTCTGGTGAGATTTCTCGTCGACCTAGGAGAAGAAGAAAAAGAAAGTCAGATTAGGTCAGAGGATGGTACAAACATAGCTGTCCCTTGATCCTTTAGTCTGTCCTTGGGTCAGAAAAAGAAGGAGAAAGAACATCACGTGAAGATTTTGATTCAGTGGAGTGTGATGGGCTGGTGGATAAGAAAGCTCACAGGGGATTTGAGAAAGGAAAGGTAAAGCCCATTGATTTTGTTGAGTTGGGAGGTGGGAAAGATATGTGATGGGCCGGTAGATTTGAGAAAGGGACGGGAGGAAGTGGACCAGATTTCTTTGGGTCCTCTTAAGAAATCAAGGTTGTGCAAAGGAATTATTAAAAGAGGGTCATCGGTTCATAGATGTGAGACCCAAGGGGATGATTTAAGGAAACCGATGGATTCTAACTTAATCCATCAACATGTAGGGCCATTTCTTACCATTTAAGAAAGAAGATGAGCATTGGGGAATCAGATTGGAAAATGAATTTAGGGCCCCAAGAAGACAGTTTTTTACCATTTATTTTGTGTATCCGGGTTCTAGCAACTAGGGTGGGGGTGTTGGTCATTTTGTGTATCCTTATTCTTTTCAAGGTTTAAACTGTTCCGAGACTATGCAAAGGAAGCTTCCCAATACGTGTTTGCTGCCTTCAGTGTGCCCCCTTTGCTTGGAAAACAGTGAGCTATTAGTTCACCTATTCATTTTCTGTCCTTTCTCATCAAATTGTTGGTTTAGCATATTTTCTATGCTCAAATCAGTTTGGGTCTTTGATGGTTCATTTAGCGCCAATGTGCGCCAATTACTGAGGGGTCCTTATTTATCAAAAAAACATTTTCTAATTTGGGTTAATTTGATAAAAAGCGATTCTAGCTGAGATTTGGTTTGAACGTAACCAACGCATCTTCCATGATAAAAGAAGGAATTGGGCTGACATCGTAGAGATTTCTAAAAGAAATGCAGCAGCTTGGTGTTCTTCAAATGCAGAATTTAAAGATTACTCCATTAAAGACATTTGCCTCAATTGGACCGCCTTCATCTGATGAGACTCAATGTAGTTTTCCCCGATTGCCAGTTCAGAATTAGTGCTTCTGTAGTTTGGATGGATTTTATATGTATTTCTGCCGTTTTGTTTTTCCTTTCAACCTTGCTTTTAGTCTTCCATAGGTAGCTTTTGTAGATTGTTTTGATGGTTACTTTGGTCTTTTCATGACCTTAGTATTGTTCTTGTATTTTGGTCTTTTCTTTGTATTTTGGATATGATGAGGGTGCTATGGGGGTGTCAACCTCGTTGAGATGTCCGGGTGCACCTACTGAACCTTTCTCTCTTTCTCTCCCTCAATTCTTGGCTTCCATATTATTCTCATTGTATAGTTCTCTTGTACATTGAGTTTATTAATAATAAAGAAGCTTGTCTCCTTTTCAAAAAAAAAAGGAGTATTCAATTCAAGGTTTTTCGGGTTGTGCCTTACCGCTTGCGCTGATCTATTATCTAGAAGAAAAGTGGTCGTTGCTTAATCATGTGGTCCAAGCGAGGGGATTCGATTCAAGTGGCGGCGAAGAGTCTCTTACCAACGTTGGCTGTGAGGGGCTTCTTTTTGGCCATTCCACCCTCTTTGAATCTCAAGGGGGCCTTGGTTGGTGAAGTTAAAAACGATGAGAGATGGGAGGTTATGGGTTCAGCGGGTACTAAGAGAGTGGAGACTAAAGAAACTGGATAAAATGATAAGAGAGGTAGCGATCAGGTTGTGGAGGTTGGAGGGGTTAAGTTGAAACGTAAGGGAGGTAGTGACAGCTTATCTAGAGAGTTAAAGAAACTGGATAGCTCTGTAAATTGTGGGGGCAAGAAAGCCTTAAAGGAGGCAAGGTCGTCTAGGTTGTATCTTTGCATGTTAGGGGGTTGGAGGGTCAGTCTAAAAGAAGCCTTGTTAAGGAGGTGCTTAGACAAGAGGATTCAGACATTGTTTTTCTGATAGAAACCAAAAAAAGTGGTTTCTGTAAAAGGATAACTAGTATTTGGAAGAGTAGGAGGTTCTTGATGCTGAAGGTTTGTTTGGTGGGATTCTCATGTTGTGGAATTCGAGATTGTGTTGCTTTGAAGTGATCCATGGCAGGCACTCCACTACTGTGGCTTTTCTGGATGGTGAGGGTCATGAGTTTTGAGTTACAGGGGTCTATGGTCCCCTAAGGATGAGGGGTAGGAATTTATTTTGGGAAGAACTAGGAGATCTTTTCAGATATTGTGGGGCGAGATGGTGTGTGGTGGGGGATTTTAATGTGGTCCGTTCTCCTGAAGAGAAAGCTTCGAGGGGGAGAATCGCCAGATCTATGAGATGTTTTAACAACTTTATTGATGATAGTGGTTTGTTTGATCCTCATCTCATTGGGGGTAAATTTTACTGGGCTAATTGTAGTGCTACCTCAAGGATTGATAGTGTGCTTATGTCAGAAGCGTGGATTGAGAGACTTGGGAACCCTAGGCATGTTAGAGGGTCTAGAATCACTTCGGATCACTAGCCCTTTATTTTGACTAATGGGAGGTTGAATTGGGGTTTGGTTCCCTTCAGGTTTGAAAACATGTGGCTTGATTCCCTCCTTAAAGCGAATATCGCTTCTTGGTGGAACACTATTATCCAAGGTATGTGGGAGGGTTTTAGATTCAAGGAAAAGCTGAGATTTCTTAAAGCCAGCTGAGAGCTTGGAACAAAGAGATGTTTTGGGATATTGGGGTTAAAAAGGAGATTGTTGCTGGGATTGATGAAATTGACAATTTTAAGTTGGATGATCTGCTTGAAAATGGCCTCATTTTTTTATTTTTATTTGAAAGGGGCCGCGCACGCAGTCCCCCACTGCCACAGATAATGACGTATGCTCTGCCCCTTTGAGCAGACCTTAGACGGGCACCCCTCCGAAGTGCAATGGAGGTCACCAACCTAGGCCATGAGCCTTTATGATCGCTCATTGACCCCGTCCAGGTAAGTATCTTGAAAATGGCCTCATTGAGGAGAGATTTAGTTTAAAAAGGAGCCTTGAAGAGGTGATGGGAAAGGCTAATATGAGCTGGTTTCAAAAGTGTAAAATTAAGTGGGCCAAGGAAGGGGATTGTAATACGAGTTTCTTCCATAGGATGGTTAAGAAGAAAGAAGAACCATATCGGGTATCTGTTTTTGGATAATGGGGTTTGTACCAGTGATAGAAGAGGAAATTGAGGGGGAAATTTTAAAGTTTTTCTTTTTTACTCTTTATAGCCCTAAGGTGACGGAGAATCCATTTGTAGAGGGTATTGATTGGAGCCCTATTTTGTTGAGGGAAGATGAGTTAGTGGTCCCTTTTACAATTGAGGAGATCAAGAAGATTGTCTTAAGTTGCAATGGCAACAACGCTCCTGGAGCTAACAGGTTTTCTATGGCCTTTTTCAGTAGAATTGGGATCTAATCAAAGGTGACTTGGAGGGAGTTTTTAAGGAATTTTTTGAAAGAGGGATCTTGAACAAATGGGTGGTTGAAACCTTTGTTTGTTTGATTTCTAAAAAGGAGAATGTGATTAAGAATTCCAGCCTATCAGTCTCATTACTAGTGTTTATAAGATTCTAGTTAAAGTTCTTGCTAATCGTTTAAGGAAAGTGTTAGGAAAGTGTTGCCATCGACTATTTCTGAAACTTAGGGGACTTTTTTTCTGGAAGACAGATTTTGGACCAAGCTTTGATTGCAAATGAAGCTATTGAGGAGTATAGATCGAAGAAGTTGGAGGGTGTTACGTTAAAGTTTGACTTTGAGAAAGCGTAGGATCATGTGGACTGGGACTTTTTGGATAGAGTGATGATGAAGAAAGACTTGGTTATAAATGGAGAATGTGGATGTCGGGATGCGTTAGAAACGTTAAGTATTCTATTCTCATCAATGGAGTAGTCCCAAAAGGGGCGATTCAAGCATCGAAGGGCCTTAGATGGGGTGATCCTTTGTCTTTGTCTTTGTTTTTGTTCTTATTGGTTGTGGATATTCTAAGCCAGTTGATAAGTGTTGAGCCTTTTAAGATTGGTAGAGATGAAGTGGCCTTATAGCACCTTCAATTTGCTATGGTACTTTGCTCTTTTGTTTTGGAAAATCTTCTTCATATATTATTTCATCTTTTTTCTCGATGAAAGTTCAGCAATTTATCAAGTGAACAAAAAAAAATCTCTTCTATTTCATTGCTGTCAAATTTTCATTTAGGGGGGTGTTTGGTCCTCGACTTTCATAAGTCGGTGTTAAATAACTCAACATCAATAGTGTTTATCATTGAAGTTTGTATATTTATTAAGGAACTCTATCTTACAACTCAAACACAAACTTCATAACTTCAATATTAACTCCGGACTCCAAAACTAAACTTAGCGCTCCAAAGACTCAATTGGGATCTTTTAAATGTCCTCACGAAGGAAAAGGTTCACTTCATTCTGTTGGTCTAAACATTGGAGAAGGCATGCACATATATTTGAAGTTGTGTTTCTTCAGTGGTAAGTAGCTCTTTGCTAATTTGTGCCTGTTTTCTTTGGTCATTTGAATTAAAAAAACTATAGGCATCATATTTATGAGAAGCATGGAGGTGCCAAATCAATTGAGCTGAAGGAGATTGGTCCACGGTTTGAATTGCGACTGTACCAGGTACCTATTTTGTGATTCGGTTCATTGCTTTGACGGATTTCATATGTACGTTCTTGATACTGGAGAAAGCATTTCAATAAGCAAAGTTAAATAGTCAATCTAGGTGTTTCGTTTTATTTTGATCCTGTAGAAAGTAGCTGACAACAGACTAATTAATAAGCAGCCATGGTCTTGCATATATTATCATCCAAATTCTCTCTGGAGTGTTTGAGAGTAAATTTCAAGTTTTAAGGTTGTCAGAAGTTGGAAATTATCATCATAATAACCGAGGCTTTAGAAAAAGAAAATTAAAGTTGCTCAAATACAACTTATTTTATTTTAGAAGAAACTAGTACAATTGTATTGGATTGAAACATAATTTGACGGAGGACGAGATACTTTTCAAGAAAAATCAATACTCTGTTTATAAAACTTTGATGATAATATTTTCGTTCATCCTTTTGCAGTTCGTAGAAATATTTAATTTGTGGCCATCAGAAGTTTTTGTTTGGAGTTCATTTGTTATCATTTTGAATTTCAGACGTTGTCAACAATCTTACCAAAGAAAAAAATTGTTGTATTTCGAGATTGTGTTGATGTTATCTGGAATGTCTTCTGCAATAATAACTGAAATCTTTGTCGAAAAATAATGGATTATATTACAATTTAGTCTCTTAACTTTTTAGTTTTGTGTCCACTTGGTAGTTGTTCTCTAGTATGTTTTTGTGTTCAATAGGTTTCTTAACTTTCAACCGTGTCTAGAAGATCCTTGTCCTAATAATTAAAGGCTAACCTTGTACAAAGTGATCCAACAAAATTATAAAATTCAGATTAGGATAAAGTATATATATAACTTATTCTCATCACTCATTCCCTTTATTCTATATTTATATATCTTTTTAACTTAACTACCTTGGCTGACCGGAATCCAAGAGAACGTGGTCTGCAATTTTGTTGTATCTAAGTATTGTTTCCAGGTGGTAAGCAATATTATGTTGTGTATCTAAATTTAAATTTTGGTTTGTTTGGTGGATGTTTATGGCAGATAAAGTTAGGAACTGTGGACCAAACGGAAGCTCAGAATGAATGGGTGATTCGACCATATATGAAAACAACCAAGAAACGTGACTTCCTTGGTGTTTAAAAAACGCAGATTGTAATCTATTATTTTATTACTACTTTTGCATCATCACATTTTTCTTCTTTTTTCTTATAAAATTTGTATTAAAGTTTATATTTTCTTCGGGTGGTTTGGGATACCAAAATTTTGTCTCTTAGATTATTTATAGATTTTAGTTGAATTAGAAAGGCAATTTTTGTTTTTGACACAATGATTGTAGAAGTCTGAAGAGACGTGCACTTGATTCTTTGCAAATTTCATCATAGTGTACGGTGTTCAGATTGTTAATGATTTTATTTTTTTGTCCATACATTTATTATCTGTGCATATATGATGCGTTTGGTTTGGTTCTTGGCTAATTTTGGGATATTTAGGTTAACAGCAGTAACTATACCATCATTTGAGAGAATGACAAACATGAAATTTTATAAGAAAAATAGCAAACAACCTCTATACTATTTGTCTTGGAGTTTTATTTTCCTTAAAATGCCTTGTATACAATTTTTTTTTAATGTTCGCTGAATTTCTCAAACAACTTTGTCTTCTCCACTACATTTTTGGTTGATCTCCGATTTTGTTGATGATGTAAAGAGGAAGGCCTCAAAATAGGATTGACTAAGAGTTCAAGTTGCAATAGTTTTTTTTGAGTGATTTTTCTCAATCCATTGTAAAAGA

mRNA sequence

GAAAATTTATTTTCCATGGTTGTCAAGTTAGCTGAAACTGTCCTTCCCTCAACGATCGTAAGCCCTTCTTCTTCCCTAAAACCCTATACACCAGCAGCCACTTGAGCCCTGCTCCGCCACTGCACGCTGTATTCTCAGCCTTCCGCCGTCACTCCCTCTCATACTCTCTCGCCTTCTCGAGCAAACACATCCACTCATCTTTCTTCTCTTTTTCTCCGAAACAGTATTCATCCCCTAACCCGTGCCGTTGTTGAGATAGCGCTTCCGCCGCTCATTTTTCAGACTCTCGGTTGGGGTTTGGCTAATAGTTCAAAGCAATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTATATGAGAAAAAGCGGAAGATTAGAGAAGCCTTGGAAGAGGGAAAACCCTTTCCTACTGAACTTCGAAATGAGGAGGCAGCACTTCGTAAAGAAATTGAACTTGAGGATGAACTCACAGCAGTTCCAAGGACACACATTGATGATGAGTATGCAAATGCTTCAGAAGTTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAACTAAAAATTGTTTTTCCCAATGCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGTCGTGCTCATGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATCAGCCATCTTCCATTTGGTCCAACTGCCTATTTTGGATTGTTGAATGTGGTTACAAGACATGAAATCAGGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAATATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCCAAATCAATTGAGCTGAAGGAGATTGGTCCACGGTTTGAATTGCGACTGTACCAGATAAAGTTAGGAACTGTGGACCAAACGGAAGCTCAGAATGAATGGGTGATTCGACCATATATGAAAACAACCAAGAAACGTGACTTCCTTGGTGTTTAAAAAACGCAGATTGTAATCTATTATTTTATTACTACTTTTGCATCATCACATTTTTCTTCTTTTTTCTTATAAAATTTGTATTAAAGTTTATATTTTCTTCGGGTGGTTTGGGATACCAAAATTTTGTCTCTTAGATTATTTATAGATTTTAGTTGAATTAGAAAGGCAATTTTTGTTTTTGACACAATGATTGTAGAAGTCTGAAGAGACGTGCACTTGATTCTTTGCAAATTTCATCATAGTGTACGGTGTTCAGATTGTTAATGATTTTATTTTTTTGTCCATACATTTATTATCTGTGCATATATGATGCGTTTGGTTTGGTTCTTGGCTAATTTTGGGATATTTAGGTTAACAGCAGTAACTATACCATCATTTGAGAGAATGACAAACATGAAATTTTATAAGAAAAATAGCAAACAACCTCTATACTATTTGTCTTGGAGTTTTATTTTCCTTAAAATGCCTTGTATACAATTTTTTTTTAATGTTCGCTGAATTTCTCAAACAACTTTGTCTTCTCCACTACATTTTTGGTTGATCTCCGATTTTGTTGATGATGTAAAGAGGAAGGCCTCAAAATAGGATTGACTAAGAGTTCAAGTTGCAATAGTTTTTTTTGAGTGATTTTTCTCAATCCATTGTAAAAGA

Coding sequence (CDS)

ATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTATATGAGAAAAAGCGGAAGATTAGAGAAGCCTTGGAAGAGGGAAAACCCTTTCCTACTGAACTTCGAAATGAGGAGGCAGCACTTCGTAAAGAAATTGAACTTGAGGATGAACTCACAGCAGTTCCAAGGACACACATTGATGATGAGTATGCAAATGCTTCAGAAGTTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAACTAAAAATTGTTTTTCCCAATGCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGTCGTGCTCATGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATCAGCCATCTTCCATTTGGTCCAACTGCCTATTTTGGATTGTTGAATGTGGTTACAAGACATGAAATCAGGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAATATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCCAAATCAATTGAGCTGAAGGAGATTGGTCCACGGTTTGAATTGCGACTGTACCAGATAAAGTTAGGAACTGTGGACCAAACGGAAGCTCAGAATGAATGGGTGATTCGACCATATATGAAAACAACCAAGAAACGTGACTTCCTTGGTGTTTAA

Protein sequence

MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV*

Homology

[Close]

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot
Match: Q0VD01 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 7.4e-89
Identity = 165/292 (56.51%), Postives = 212/292 (72.60%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE +  PTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAERTAQERKDKVRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D        H+DDEY  A   DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTNHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           T  EA PH+I++ F+++LG+R ++IL++LFPVPK D++RV+TFANQ DYISFRHH+Y+K 
Sbjct: 181 TASEAKPHLIMHGFSSRLGKRVSDILRYLFPVPKDDSRRVITFANQDDYISFRHHVYKK- 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRDFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Sbjct: 241 TNHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 288

[Close]

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot
Match: Q8VHZ7 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.7e-89
Identity = 164/292 (56.16%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRDFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot
Match: Q5PQR5 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.7e-89
Identity = 164/292 (56.16%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRDFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot
Match: Q96G21 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP4 PE=1 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.7e-88
Identity = 164/292 (56.16%), Postives = 213/292 (72.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRDFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot
Match: Q5R947 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP4 PE=2 SV=2)

HSP 1 Score: 327.4 bits (838), Expect = 1.7e-88
Identity = 164/292 (56.16%), Postives = 213/292 (72.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRDFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of CsGy5G015460 vs. NCBI nr
Match: XP_008465711.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis melo] >KAA0066046.1 U3 small nucleolar ribonucleoprotein IMP4 [Cucumis melo var. makuwa] >TYJ99850.1 U3 small nucleolar ribonucleoprotein IMP4 [Cucumis melo var. makuwa])

HSP 1 Score: 582 bits (1500), Expect = 1.91e-209
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293

[Close]

BLAST of CsGy5G015460 vs. NCBI nr
Match: XP_038907229.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida])

HSP 1 Score: 580 bits (1496), Expect = 7.80e-209
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of CsGy5G015460 vs. NCBI nr
Match: XP_004143747.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis sativus] >KAE8648462.1 hypothetical protein Csa_008458 [Cucumis sativus])

HSP 1 Score: 580 bits (1496), Expect = 7.80e-209
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKK MG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKTMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293

[Close]

BLAST of CsGy5G015460 vs. NCBI nr
Match: XP_022939256.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_022939257.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_023549778.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549780.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573 bits (1476), Expect = 8.73e-206
Identity = 285/292 (97.60%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG 292

[Close]

BLAST of CsGy5G015460 vs. NCBI nr
Match: KAG7016636.1 (U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573 bits (1476), Expect = 7.42e-205
Identity = 285/292 (97.60%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 59  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 118

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 119 DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 178

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 179 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 238

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 239 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 298

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 299 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG 350

[Close]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL
Match: A0A5D3BJ53 (U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00630 PE=4 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 9.27e-210
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293

[Close]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL
Match: A0A1S3CPI1 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC103503328 PE=4 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 9.27e-210
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLGV 293

[Close]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL
Match: A0A6J1FFE4 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 GN=LOC111445227 PE=4 SV=1)

HSP 1 Score: 573 bits (1476), Expect = 4.23e-206
Identity = 285/292 (97.60%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG 292

[Close]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL
Match: A0A6J1K117 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN=LOC111489687 PE=4 SV=1)

HSP 1 Score: 570 bits (1468), Expect = 7.00e-205
Identity = 284/292 (97.26%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKQ 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG 292

[Close]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL
Match: A0A6J1DUL2 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673 GN=LOC111024500 PE=4 SV=1)

HSP 1 Score: 563 bits (1452), Expect = 1.92e-202
Identity = 282/292 (96.58%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+ TAVPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240

Query: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 292

[Close]

BLAST of CsGy5G015460 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 469.5 bits (1207), Expect = 1.9e-132
Identity = 225/293 (76.79%), Postives = 262/293 (89.42%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60
           M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKP PTELRN EA LR+EI+LE
Sbjct: 1   MQRRLVRLKKEYIYRKSLEGDERKVYEQKRLIREALQEGKPIPTELRNVEAKLRQEIDLE 60

Query: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+ TAVPR+HIDDEYANA+E DPKIL+TTSR+PSAPL +F KELK VFPN+QR+NRG QV
Sbjct: 61  DQNTAVPRSHIDDEYANATEADPKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180
           ISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK- 240
            MPE YPH+I NNFTT++G+R  NILKH+FP PK D KR+VTF+NQSDYISFR+H+Y+K 
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVGNILKHIFPAPKLDAKRIVTFSNQSDYISFRNHVYDKG 240

Query: 241 HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 293
            GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKR F+G
Sbjct: 241 EGGPKSIELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFIG 293

[Close]

BLAST of CsGy5G015460 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37
Identity = 113/314 (35.99%), Postives = 163/314 (51.91%), Query Frame = 0


Query: 9   RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPFPTEL---------RNEEAA 68
           +R  +Y K    K+    EK++KIR        ALE G+  P ++          ++E  
Sbjct: 44  KRSKVYAKQKHEKK---LEKQKKIRARDAAEKRALELGEEPPQKMIPKTIENTRESDETV 103

Query: 69  LRKEIELEDELTAVPRTHIDDEYAN---ASEVDPKILITTSRDPSAPLTQFAKELKIVFP 128
            R +   ++EL A     ID +  N     E+ PK+L+TT R  S        EL  V P
Sbjct: 104 CRPD---DEELFA----DIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALISELLSVIP 163

Query: 129 NAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVT 188
           N+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V 
Sbjct: 164 NSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVL 223

Query: 189 RHEIRDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQS 248
           R +I++    G      P ++LNNFTT+LG R     + LFP P P+   +RVVTF NQ 
Sbjct: 224 RKDIKNH---GNPTSHQPELVLNNFTTRLGNRVGRFFQSLFP-PDPNFRGRRVVTFHNQR 283

Query: 249 DYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWV 292
           D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D    + EWV
Sbjct: 284 DFIFFRHHRYIFETKESKSDKGKEETIKPRLQECGPRFTLKLVTLQHGTFDTKGGEFEWV 343

The following BLAST results are available for this feature:

BLAST of CsGy5G015460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0VD01	7.4e-89	56.51	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 ...	[more]
Q8VHZ7	9.7e-89	56.16	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Im...	[more]
Q5PQR5	9.7e-89	56.16	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 ...	[more]
Q96G21	1.7e-88	56.16	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP...	[more]
Q5R947	1.7e-88	56.16	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP...	[more]

BLAST of CsGy5G015460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465711.1	1.91e-209	100.00	PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis melo] >KAA...	[more]
XP_038907229.1	7.80e-209	100.00	U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida]	[more]
XP_004143747.1	7.80e-209	99.66	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis sativus] >KAE8648462....	[more]
XP_022939256.1	8.73e-206	97.60	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_02293...	[more]
KAG7016636.1	7.42e-205	97.60	U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CsGy5G015460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ53	9.27e-210	100.00	U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CPI1	9.27e-210	100.00	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1FFE4	4.23e-206	97.60	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K117	7.00e-205	97.26	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1DUL2	1.92e-202	96.58	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673...	[more]

BLAST of CsGy5G015460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63780.1	1.9e-132	76.79	Ribosomal RNA processing Brix domain protein	[more]
AT4G01560.1	1.4e-37	35.99	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38
None	No IPR available	GENE3D	3.40.50.10480		coord: 83..258 e-value: 7.2E-48 score: 164.6
None	No IPR available	PANTHER	PTHR22734:SF2	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 1..290
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 82..265
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 86..262 e-value: 1.5E-62 score: 223.8
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 90..260 e-value: 2.9E-33 score: 115.6
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 83..268 score: 45.28981
IPR044281	U3 snoRNP protein/Ribosome production factor 1	PANTHER	PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015460.2	CsGy5G015460.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0042134	rRNA primary transcript binding
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0019843	rRNA binding