CsGy5G014930 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G014930
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 20649502 .. 20650527 (-)
RNA-Seq ExpressionCsGy5G014930
SyntenyCsGy5G014930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATTGGGTTCACATGCATGGTTAAAAGAGGAGAAGGGCGCGCATACAGGTTCAGCTCGAATGAAAGGAGGTTGGCTCGCGACTTCATAAAGGTGATGCTTGCGCGAAAAGCAGCTCGAAAAGCCATAACAATGAGGTTAGATTGCGAATGGAAAAGGGGCTTCTCGTGGCGACTCGAAGTAGAGAGGAAGAAGACGGGTTCTTCATCTATGTCTGTGCAAGGACCGATGATGAGGCTTGCTATTGGTCGACGATGCACAAATGGTCGTCGAAGGGGCTTTGCAGTGGCAGTGCTAGGATTTGAACGAAGGAGGAAGGTGAGAAAATTGTTTATTTGCTTAGCACACAGATCGAGACTAAATTTATAATAATAATAATAAATGTTATTATTATTACTATTATTTCCTTTTCGTTAATACTTTTAAATAAATCATATTTTTCTATTTTTCTATGAAATGTAAATATTTTTTCAAATGTTCTATTTTTGACAATTTTTCTTAAATATACATAAAAAATGTACTTAATTAATTTCAAATTCAACAAAACCAAAATAACCTCACATTTAAAACAATTCAACATAGCACCCAATATTCTTAAAATAAAAATTAAGATAATTAAATACAGAATTTCCTTACGTTTGAGTTCACAAATTATCTTTGTTGGTTGTGGCTTGAGTGATCTTTAACCATCTATATTTTTAACAACATCACTTTTGTCCCATACTCAACATCTTGAATTCTAAAAAAAAAAAAAAACAGAGAGAGATTATGTGTTAATTTTTCTTTTGGCGTATGACATGATCCTTCGAGAATCTCAACTTTGATTGCTTTATAAATATTGTTTAGAGGAGAGGTGTATTTGAAGGGAAAGAAGAGAATAAACGCTTAATCAAGATCAAGATCATGAAGAGGAATTTTAAGAAGAAGGAAATCCAAGAAGAGAAGAAATGGACGAAGCAAGAGAAACTAGGGTTGAAGACCACCATTTCGTTTATCTGGAGACCACCATTTCGTTTGACTTAA

mRNA sequence

ATGCAGATTGGGTTCACATGCATGGTTAAAAGAGGAGAAGGGCGCGCATACAGGTTCAGCTCGAATGAAAGGAGGTTGGCTCGCGACTTCATAAAGGTGATGCTTGCGCGAAAAGCAGCTCGAAAAGCCATAACAATGAGGTTAGATTGCGAATGGAAAAGGGGCTTCTCGTGGCGACTCGAAGTAGAGAGGAAGAAGACGGGTTCTTCATCTATGTCTGTGCAAGGACCGATGATGAGGCTTGCTATTGGTCGACGATGCACAAATGGTCGTCGAAGGGGCTTTGCAGTGGCAGTGCTAGGATTTGAACGAAGGAGGAAGAGGAGAGGTGTATTTGAAGGGAAAGAAGAGAATAAACGCTTAATCAAGATCAAGATCATGAAGAGGAATTTTAAGAAGAAGGAAATCCAAGAAGAGAAGAAATGGACGAAGCAAGAGAAACTAGGGTTGAAGACCACCATTTCGTTTATCTGGAGACCACCATTTCGTTTGACTTAA

Coding sequence (CDS)

ATGCAGATTGGGTTCACATGCATGGTTAAAAGAGGAGAAGGGCGCGCATACAGGTTCAGCTCGAATGAAAGGAGGTTGGCTCGCGACTTCATAAAGGTGATGCTTGCGCGAAAAGCAGCTCGAAAAGCCATAACAATGAGGTTAGATTGCGAATGGAAAAGGGGCTTCTCGTGGCGACTCGAAGTAGAGAGGAAGAAGACGGGTTCTTCATCTATGTCTGTGCAAGGACCGATGATGAGGCTTGCTATTGGTCGACGATGCACAAATGGTCGTCGAAGGGGCTTTGCAGTGGCAGTGCTAGGATTTGAACGAAGGAGGAAGAGGAGAGGTGTATTTGAAGGGAAAGAAGAGAATAAACGCTTAATCAAGATCAAGATCATGAAGAGGAATTTTAAGAAGAAGGAAATCCAAGAAGAGAAGAAATGGACGAAGCAAGAGAAACTAGGGTTGAAGACCACCATTTCGTTTATCTGGAGACCACCATTTCGTTTGACTTAA

Protein sequence

MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRLEVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENKRLIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT*
Homology
[Close]
BLAST of CsGy5G014930 vs. NCBI nr
Match: XP_031742134.1 (uncharacterized protein LOC116404077 [Cucumis sativus] >KGN51054.1 hypothetical protein Csa_008327 [Cucumis sativus])

HSP 1 Score: 318 bits (816), Expect = 2.00e-109
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0 

Query: 1   MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL 60
           MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL
Sbjct: 1   MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL 60

Query: 61  EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENKR 120
           EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENK 
Sbjct: 61  EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENKC 120

Query: 121 LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT 165
           LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT
Sbjct: 121 LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT 165

[Close]
BLAST of CsGy5G014930 vs. ExPASy TrEMBL
Match: A0A0A0KQC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420860 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 9.67e-110
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0 

Query: 1   MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL 60
           MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL
Sbjct: 1   MQIGFTCMVKRGEGRAYRFSSNERRLARDFIKVMLARKAARKAITMRLDCEWKRGFSWRL 60

Query: 61  EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENKR 120
           EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENK 
Sbjct: 61  EVERKKTGSSSMSVQGPMMRLAIGRRCTNGRRRGFAVAVLGFERRRKRRGVFEGKEENKC 120

Query: 121 LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT 165
           LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT
Sbjct: 121 LIKIKIMKRNFKKKEIQEEKKWTKQEKLGLKTTISFIWRPPFRLT 165

The following BLAST results are available for this feature:
BLAST of CsGy5G014930 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G014930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031742134.12.00e-10999.39uncharacterized protein LOC116404077 [Cucumis sativus] >KGN51054.1 hypothetical ... [more]
BLAST of CsGy5G014930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQC19.67e-11099.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420860 PE=4 SV=1[more]
BLAST of CsGy5G014930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G014930.2CsGy5G014930.2mRNA