CsGy5G014020 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G014020
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein MNN4-like
LocationGy14Chr5: 19054696 .. 19056296 (+)
RNA-Seq ExpressionCsGy5G014020
SyntenyCsGy5G014020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAGAAGGGAAACAGGGAGCGGGAAGAGCTCCTCAACAAAGTTCAAAAGATAGCCCTCTCTGTAGAGAGAGATAAGACAAAGAAAACTCCAAGCGAACTGTGTGACGAGTTGGAGAAGGAACTGGAAGATGAAAATTCTCTAGAAGAGGTGATAAAACCTTCAAGAAAAAGGAAGGTTACGATGAAGAAGGTCTTCCAGTCTCTAATCTTCAGCATCTCAGTCGGCTTGATTCCAGAGGCTTCAATCTTCAACCGTTCGTCAGCGTTCGACGTACGGCAGCTCGTTTTCAGATGGCCACCATACGACAGTCTTCTCCGATTCCAGCGCACGGCTCCAATCGTCCGATCTTCAGCGCACAGTTGAGGACAGCCACAGTACGACAGTCTTCTCCTATTCTAGAAGTACGCGGGTTCTTCCCCGATTTCTTCATGTTTCCTTCTCTTAAGTTATTAAGTTTCTTTCCTTCTCCCCTCGTATGTTTGTGTAAGTTACAAATGACAATTTCATTGTAATTTCTTTTATTTTACTGTCTCTGATTTCTTCAGGTTGCCTATCTTTCCCTCTCCCCTCGTATGTTATGAGTAAAATACTTGTGCCATATGAAAATTTTCAAGAAAAAAAAATTGTAAAAAAGATCTTGGATAGTTGGACTGAGAATAATTAATAACACTCTTATTTTTCATTACATGAAGTTTTCTATCCAGTTCTAATACTTTCAAATTGAGTAGGAACATATTTTTATTGTTTGAGGATATTCATTTAAAGTTATGAATAAAATGCTTGTGCCACTTAAACATTTTCAAGAAAAGAAATTGTAAAAGGTCTTGGCTAGCTGTACTAAGAATAATTAATAACATCCTTATTTCTCAAAACATGAAGTTTTCTATCCAGTTCTAATACTCTTTGGTATTGATAATATAACCCTTCTTTAAAGTATTCATCATTTTCTTTTCACTTCTAACATAAATATGTTGACATGAAATTTGACAAAAAAATGTCTTGTGATTTATCAGAAGGGCCATGGTATTTCTGAATCTCTCCTTAGTGAGGCAAAGAAAGTGACACGCATGTTTTTCCAACTTCCTTGTAAAGAAAAAATTAAAATCAAATTGACTCCAGACAGTGGATACAAGTTTGTTGAAGAGAATAGGATGTTATTTCTCACACATGTAAACAGCCAAATTTTCTGTTGATAATTTCAAGAAGCCAATGCGAATTTAAAATTTTATATGCAGAGGGTATCAAAGAGTAGGGGAAAACATAACTAGAGGAGTTTCAGATATGCATGAAGCTATAGACGTGAGCTTGTCTTCATTTATTGAACAAGTTACTTATATTAACTTTCCATGTCATAGTGGAAGCCATCTATTTTTGTATTTTGTATTGCTAAACTTCTGTGCCTTCACGTTTGCAATTGTATACAGTGCTATAGGAAATTTAAACCAGGAACTGTGGAACTCTTGGCAAAACAATGGAGGGTAGTAACCAATGGTAAGCAAGTTGCTGAGAACGGCCACCGTCTCACGCACAAGCAACGTTTTAATCATAAGTGTTATGGCTATGATGAGATCCACCTTTGCGGTTGCTCTTCGTAA

mRNA sequence

ATGAGAGAGAAGGGAAACAGGGAGCGGGAAGAGCTCCTCAACAAAGTTCAAAAGATAGCCCTCTCTGTAGAGAGAGATAAGACAAAGAAAACTCCAAGCGAACTGTGTGACGAGTTGGAGAAGGAACTGGAAGATGAAAATTCTCTAGAAGAGGTGATAAAACCTTCAAGAAAAAGGAAGGTTACGATGAAGAAGCATCTCAGTCGGCTTGATTCCAGAGGCTTCAATCTTCAACCGTTCGTCAGCGTTCGACGTACGGCAGCTCGTTTTCAGATGGCCACCATACGACAGTCTTCTCCGATTCCAGCGCACGGCTCCAATCGTCCGATCTTCAGCGCACAGTTGAGGACAGCCACAGTACGACAGTCTTCTCCTATTCTAGAATGCTATAGGAAATTTAAACCAGGAACTGTGGAACTCTTGGCAAAACAATGGAGGGTAGTAACCAATGGTAAGCAAGTTGCTGAGAACGGCCACCGTCTCACGCACAAGCAACGTTTTAATCATAAGTGTTATGGCTATGATGAGATCCACCTTTGCGGTTGCTCTTCGTAA

Coding sequence (CDS)

ATGAGAGAGAAGGGAAACAGGGAGCGGGAAGAGCTCCTCAACAAAGTTCAAAAGATAGCCCTCTCTGTAGAGAGAGATAAGACAAAGAAAACTCCAAGCGAACTGTGTGACGAGTTGGAGAAGGAACTGGAAGATGAAAATTCTCTAGAAGAGGTGATAAAACCTTCAAGAAAAAGGAAGGTTACGATGAAGAAGCATCTCAGTCGGCTTGATTCCAGAGGCTTCAATCTTCAACCGTTCGTCAGCGTTCGACGTACGGCAGCTCGTTTTCAGATGGCCACCATACGACAGTCTTCTCCGATTCCAGCGCACGGCTCCAATCGTCCGATCTTCAGCGCACAGTTGAGGACAGCCACAGTACGACAGTCTTCTCCTATTCTAGAATGCTATAGGAAATTTAAACCAGGAACTGTGGAACTCTTGGCAAAACAATGGAGGGTAGTAACCAATGGTAAGCAAGTTGCTGAGAACGGCCACCGTCTCACGCACAAGCAACGTTTTAATCATAAGTGTTATGGCTATGATGAGATCCACCTTTGCGGTTGCTCTTCGTAA

Protein sequence

MREKGNREREELLNKVQKIALSVERDKTKKTPSELCDELEKELEDENSLEEVIKPSRKRKVTMKKHLSRLDSRGFNLQPFVSVRRTAARFQMATIRQSSPIPAHGSNRPIFSAQLRTATVRQSSPILECYRKFKPGTVELLAKQWRVVTNGKQVAENGHRLTHKQRFNHKCYGYDEIHLCGCSS*
Homology
BLAST of CsGy5G014020 vs. NCBI nr
Match: KAE8648391.1 (hypothetical protein Csa_008179 [Cucumis sativus])

HSP 1 Score: 248 bits (632), Expect = 2.38e-81
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0

Query: 64  KKHLSRLDSRGFNLQPFVSVRRTAARFQMATIRQSSPIPAHGSNRPIFSAQLRTATVRQS 123
           +KHLSRLDSRGFNLQPFVSVRRTAARFQMATIRQSSPIPAHGSNRPIFSAQLRTATVRQS
Sbjct: 25  RKHLSRLDSRGFNLQPFVSVRRTAARFQMATIRQSSPIPAHGSNRPIFSAQLRTATVRQS 84

Query: 124 SPILECYRKFKPGTVELLAKQWRVVTNGKQVAENGHRLTHKQRFNHKCYGYDEIHLCGCS 183
           SPILECYRKFKPGTVELLAKQWRVVTNGKQVAENGHRLTHKQRFNHKCYGYDEIHLCGCS
Sbjct: 85  SPILECYRKFKPGTVELLAKQWRVVTNGKQVAENGHRLTHKQRFNHKCYGYDEIHLCGCS 144

BLAST of CsGy5G014020 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 2.49e-08
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 11 ELLNKVQKIALSVERDKTKKTPSELCDELEKELED--ENSLEEVIKPSRKRKVTMK 64
          ELLNK +KI LSV++DK KKT    CDELEKELED   +  EEV+KPS+KRKVTMK
Sbjct: 34 ELLNKAEKITLSVKKDKAKKTSEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMK 89

BLAST of CsGy5G014020 vs. NCBI nr
Match: KAA0062287.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 3.28e-08
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 7   REREELLNKVQKIALSVERDKTKKTPSE-LCDELEKELEDENSL-EEVIKPSRKRKVTMK 65
           RE+EELLNKV KI+LS+++ KTKKT SE + +E EK+LED +S  +EV+KPS+KRKVT+K
Sbjct: 58  REQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEKKLEDLSSFKDEVVKPSKKRKVTIK 117

BLAST of CsGy5G014020 vs. NCBI nr
Match: KAE8637518.1 (hypothetical protein CSA_004751 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 6.16e-08
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 7   REREELLNKVQKIALSVERDKTKKTPSELCD-ELEKELEDENSLE-EVIKPSRKRKVTMK 65
           +ER+ELLNKV+K+ LSV++ K KKT SE  D E+EKELEDE+ L+ EV KPS+K+KVT+K
Sbjct: 66  KERKELLNKVEKVTLSVKKGKAKKTHSEEYDKEMEKELEDESPLDDEVAKPSKKKKVTIK 125

BLAST of CsGy5G014020 vs. NCBI nr
Match: KAE8648010.1 (hypothetical protein Csa_021463, partial [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 9.23e-08
Identity = 25/30 (83.33%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 155 AENGHRLTHKQRFNHKCYGYDEIHLCGCSS 184
           AEN HRLTHKQ FN KCY YDEIHLC CSS
Sbjct: 15  AENSHRLTHKQCFNWKCYVYDEIHLCSCSS 44

BLAST of CsGy5G014020 vs. ExPASy TrEMBL
Match: A0A0A0KN01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G366680 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 1.92e-29
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1  MREKGNREREELLNKVQKIALSVERDKTKKTPSELCDELEKELEDENSLEEVIKPSRKRK 60
          MREKGNREREELLNKV+KIALSVERDKTKKTPSELCDELEKELEDENSLEEVIKPSRKRK
Sbjct: 1  MREKGNREREELLNKVKKIALSVERDKTKKTPSELCDELEKELEDENSLEEVIKPSRKRK 60

Query: 61 VTMKK 65
          VTMKK
Sbjct: 61 VTMKK 65

BLAST of CsGy5G014020 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.21e-08
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 11 ELLNKVQKIALSVERDKTKKTPSELCDELEKELED--ENSLEEVIKPSRKRKVTMK 64
          ELLNK +KI LSV++DK KKT    CDELEKELED   +  EEV+KPS+KRKVTMK
Sbjct: 34 ELLNKAEKITLSVKKDKAKKTSEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMK 89

BLAST of CsGy5G014020 vs. ExPASy TrEMBL
Match: A0A5A7V5R2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00280 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.59e-08
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 7   REREELLNKVQKIALSVERDKTKKTPSE-LCDELEKELEDENSL-EEVIKPSRKRKVTMK 65
           RE+EELLNKV KI+LS+++ KTKKT SE + +E EK+LED +S  +EV+KPS+KRKVT+K
Sbjct: 58  REQEELLNKVDKISLSIKKGKTKKTSSEEIYEEFEKKLEDLSSFKDEVVKPSKKRKVTIK 117

BLAST of CsGy5G014020 vs. ExPASy TrEMBL
Match: A0A5D3BAQ6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00350 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.09e-08
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 2   REKGNREREELLNKVQKIALSVERDKTKKTPSELCDELEKELEDENSL-EEVIKPSRKRK 61
           +EK  ++ EELLN V+KI LSVE+ K KKT  E C+E EKE+ED + L EEV+KP ++RK
Sbjct: 42  KEKRLKDLEELLNIVEKITLSVEKGKAKKTTKEYCEEFEKEMEDSSHLVEEVMKPQKRRK 101

Query: 62  VTMKKHL 67
           + +K+ +
Sbjct: 102 MIVKRKM 108

BLAST of CsGy5G014020 vs. ExPASy TrEMBL
Match: A0A5A7TQG2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001330 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.77e-07
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 2   REKGNREREELLNKVQKIALSVERDKTKKTPSELCDELEKELEDENSL-EEVIKPSRKRK 61
           +EK  ++ EELLN V+KI LS+E+ K KKT  E C+E EKE+ED + L EEV+KP ++RK
Sbjct: 42  KEKRLKDLEELLNIVEKITLSIEKGKAKKTTKEYCEEFEKEMEDSSHLVEEVMKPPKRRK 101

Query: 62  VTMKKHL 67
           + +K+ +
Sbjct: 102 MIVKRKM 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8648391.12.38e-8199.17hypothetical protein Csa_008179 [Cucumis sativus][more]
TYK25886.12.49e-0867.86protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0062287.13.28e-0863.93protein MNN4-like [Cucumis melo var. makuwa][more]
KAE8637518.16.16e-0863.93hypothetical protein CSA_004751 [Cucumis sativus][more]
KAE8648010.19.23e-0883.33hypothetical protein Csa_021463, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0KN011.92e-2998.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G366680 PE=4 SV=1[more]
A0A5D3DQE51.21e-0867.86Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00... [more]
A0A5A7V5R21.59e-0863.93Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00... [more]
A0A5D3BAQ69.09e-0852.24Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00... [more]
A0A5A7TQG21.77e-0750.75Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G014020.2CsGy5G014020.2mRNA