CsGy5G013250 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCCATTTTGGATCAACAACCTCTCCTCTTCCCCGCCGTCGATGATCTCTCCTCCGCCGTCCCCGCCTTCGCTTCCACCCCTCTCCTCCGCAAGAAACGTATGCCCAGAAACCGTCGCCCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCAATCTTCCTACTTTCTCCTTTCCTTCTTCTTCCTCCTCCTCCACTCCCCACCTCCCTTCTCCTCGGGTACTTTCTCTCTTCTCTTTTTTTTCTAATTTTATTTCTTTATCTACTTATTTCTACTCTACCCTTTTTGGGTTATCTCACAATTCACTTAGCCCTACACATTTACCACATACCTAAGATCATCATCATCATCATCATTTAACCTTACAATTTTTAACTCAATATTATTTTTTATTAATACACTAAATTATTTTACTAAATTTAAGTTGTGTATAGATTGTTTTACTAATGTCAACTAGCAAGCTGGAGTACTTCATCCATCAATTTATGTATAGGAAAAGTAATTAACTAGAAGCAAAAATCAAATGAAAAATACAAAGTTTCTCGTTTTATTTACTTATTATATTTTTCATGGTGCAAAAAAAGAAAAAGGTCGTGGCTTAGGGTAAGCTGGTAATTTAAGTAGAATATGGAGGTGAATTAATTAAGCCTTGAGATTTTGTATGGCAACCTAAATAAAGTAGTTTTTGAAGACGACGACACCAAACAAACAAAAAGAGACATACCATATATATATATATATATATATATATTATTTTAATTACAATAATCCAAACATCTTTTTTTTTTCACTATTTCTTCCTTTCTTATTATTTTTAAAAATGTTGTTTTTATTTACATTATGTCCCAGACAATCTAGTTTCGAAGAAAGTGAATTTGTTTCCTTAATTAATAAATAATTTAATTCTCTCTTCTTCTTTTAATTTTTTTTCTCCTACTTTTTCCTTCTTTTGGTTATGTTTTCGATCCTAATGTTGGATTTTTTGAGATGGTCTTGTTGGGGGCAGTGTCATTGCTATTTCAAAACACCATGTTTCTTCTAGAAAAAAAAAAAAAAGTAATAAATTTGATTTTGATATGGTTTTCAAGTTTTATACTTCATTATTTGATTCAATCGACCTTCAAGTAATTTATTTGAGAAATTTAAAGAAAAAGAATATATAAAATAACATGTTTTTGTTTTAAACAGCTATCTATGATGTAAATAAATTAAATAATTTGATTGTAAAAGAAAAATTGGTGTTTGTAATTTAAATGAACAGGTAATTGACCCAAGGAAGCTGAAGTTTCTTTTTCAAAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTCAGGAGAATGATACTCCCAAAGGTTTTGTTTTTTGTTTTTTGTTTTTTTTTTAAATTTTTTATATTCATTTGATTAATTTAGATAAATATATACATATATAATTAATTAAGACGTAGCTATAAATATTAATTAGAGTTTTGATTAGTTAATTTAACTTTTCAGAAAGCAGCTGAAACTCACCTTCCTGCTTTGGAGTCTAAAGAAGGAATGATGATCACCATGGATGACTTGGATGGGGTGCATGTCTGGAACTTTAAATACAGGTTTTGTAGTTATAAATAAGATTTTATTTCCCTTTTATTTTCCTTTTGAAATATATTCATCTTCTTAGCTTATGATTTTACTTCTTTAATAATGATACTCGATGATGTACTCAATAATATGCAATTATTTGCAATTATTTGGTGATGAATTTTGCAGGTTTTGGCCAAATAACAACAGTAGAATGTATGTACTTGAAAATACTGGTAAGCTTTCTTGATTCTTCAATTTATTACTTATAATTAACTCTACACACATTTTGAAGAAAAAGAAAAGGATGAATATTGTTTTCTAGTTTTTTTTCATTACTTTTCTCGAAAAAAAAATAAATTATAAGGCAGTTGACAAAATCAAAACAAGACTATATATATGTGTTTTGTTTAATTCTTGGGTTTTTATTAGAATCGGAAAATATCATAATCTAACATATATAGATATTAAGTACTTTCTTTGTTGTGGTATTGGGTTTTCACAGGAGACTTTGTCAATGCTCATGGCTTGCATCTAGGAGATTTCATCATGATTTACCAAGATTGTGAAGAACATAACTATGTAAGTTAAATTCATATATATTCTTTCTAATAAGTAAACTCATAGCAAGTTTTTGTCCACAATTAAAGAGATTACCACTCTTACAACATTTGGTTTCAAATCGTTCCAATTAAAAACACACTAATGCATTGCACATAATTTGAAAGTGTGTGCAAAATAATTAGGGTTGAGAGGGTTATAAGTTTTCAGATAATGTTCCTTTTTTTCTCTCTTGGCAATGCATTTCCATAGGTGATTCAAGCAAAGAAGGCTTCCGAGCAAGAAGTATACACCGACATAACAACAAATGATATTGTGATCAACAACGATGACATTGTGTTTGAAGACTTCGATGCTAGCAAAGCGGCTAGCTCCATATATGTGCCTAGTCCAAGCATGGAACATCCTGTGTCGTCGTTCATCTATGACACTAGTTGTGCCTTTGACAATGATTCCCCTTTCGACTTTATGACTGGATCAATGACCAACTACTCAAGAATGGGAGCTCTCGAGGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGATTTCTACTGA ATGATGCCCATTTTGGATCAACAACCTCTCCTCTTCCCCGCCGTCGATGATCTCTCCTCCGCCGTCCCCGCCTTCGCTTCCACCCCTCTCCTCCGCAAGAAACGTATGCCCAGAAACCGTCGCCCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCAATCTTCCTACTTTCTCCTTTCCTTCTTCTTCCTCCTCCTCCACTCCCCACCTCCCTTCTCCTCGGGTAATTGACCCAAGGAAGCTGAAGTTTCTTTTTCAAAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTCAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCTGCTTTGGAGTCTAAAGAAGGAATGATGATCACCATGGATGACTTGGATGGGGTGCATGTCTGGAACTTTAAATACAGGTTTTGGCCAAATAACAACAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCTCATGGCTTGCATCTAGGAGATTTCATCATGATTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAGAAGGCTTCCGAGCAAGAAGTATACACCGACATAACAACAAATGATATTGTGATCAACAACGATGACATTGTGTTTGAAGACTTCGATGCTAGCAAAGCGGCTAGCTCCATATATGTGCCTAGTCCAAGCATGGAACATCCTGTGTCGTCGTTCATCTATGACACTAGTTGTGCCTTTGACAATGATTCCCCTTTCGACTTTATGACTGGATCAATGACCAACTACTCAAGAATGGGAGCTCTCGAGGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGATTTCTACTGA ATGATGCCCATTTTGGATCAACAACCTCTCCTCTTCCCCGCCGTCGATGATCTCTCCTCCGCCGTCCCCGCCTTCGCTTCCACCCCTCTCCTCCGCAAGAAACGTATGCCCAGAAACCGTCGCCCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCAATCTTCCTACTTTCTCCTTTCCTTCTTCTTCCTCCTCCTCCACTCCCCACCTCCCTTCTCCTCGGGTAATTGACCCAAGGAAGCTGAAGTTTCTTTTTCAAAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTCAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCTGCTTTGGAGTCTAAAGAAGGAATGATGATCACCATGGATGACTTGGATGGGGTGCATGTCTGGAACTTTAAATACAGGTTTTGGCCAAATAACAACAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCTCATGGCTTGCATCTAGGAGATTTCATCATGATTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAGAAGGCTTCCGAGCAAGAAGTATACACCGACATAACAACAAATGATATTGTGATCAACAACGATGACATTGTGTTTGAAGACTTCGATGCTAGCAAAGCGGCTAGCTCCATATATGTGCCTAGTCCAAGCATGGAACATCCTGTGTCGTCGTTCATCTATGACACTAGTTGTGCCTTTGACAATGATTCCCCTTTCGACTTTATGACTGGATCAATGACCAACTACTCAAGAATGGGAGCTCTCGAGGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGATTTCTACTGA MMPILDQQPLLFPAVDDLSSAVPAFASTPLLRKKRMPRNRRPSSSSSSSSSSNLPTFSFPSSSSSSTPHLPSPRVIDPRKLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGMMITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMIYQDCEEHNYVIQAKKASEQEVYTDITTNDIVINNDDIVFEDFDASKAASSIYVPSPSMEHPVSSFIYDTSCAFDNDSPFDFMTGSMTNYSRMGALEGFGSVENLSLDDFY* Homology
BLAST of CsGy5G013250 vs. ExPASy Swiss-Prot
Match: Q9LW31 (B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 GN=FUS3 PE=1 SV=2) HSP 1 Score: 268.1 bits (684), Expect = 1.1e-70 Identity = 158/286 (55.24%), Postives = 185/286 (64.69%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy Swiss-Prot
Match: Q01593 (B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 GN=ABI3 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.4e-30 Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy Swiss-Prot
Match: A4LBC0 (B3 domain-containing protein LFL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LFL1 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.7e-30 Identity = 85/191 (44.50%), Postives = 108/191 (56.54%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy Swiss-Prot
Match: P26307 (Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.8e-29 Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy Swiss-Prot
Match: Q7XKC4 (Putative B3 domain-containing protein Os04g0676650 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0676650 PE=3 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28 Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of CsGy5G013250 vs. NCBI nr
Match: XP_011656199.1 (B3 domain-containing transcription factor FUS3 [Cucumis sativus]) HSP 1 Score: 548 bits (1412), Expect = 1.75e-196 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CsGy5G013250 vs. NCBI nr
Match: XP_038874973.1 (B3 domain-containing transcription factor FUS3-like [Benincasa hispida]) HSP 1 Score: 436 bits (1120), Expect = 5.06e-152 Identity = 230/278 (82.73%), Postives = 243/278 (87.41%), Query Frame = 0
BLAST of CsGy5G013250 vs. NCBI nr
Match: XP_016903652.1 (PREDICTED: B3 domain-containing transcription factor FUS3, partial [Cucumis melo]) HSP 1 Score: 402 bits (1034), Expect = 4.77e-140 Identity = 196/206 (95.15%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of CsGy5G013250 vs. NCBI nr
Match: XP_022990186.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 385 bits (989), Expect = 3.96e-132 Identity = 201/267 (75.28%), Postives = 228/267 (85.39%), Query Frame = 0
BLAST of CsGy5G013250 vs. NCBI nr
Match: XP_022962310.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moschata] >XP_023549049.1 B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385 bits (989), Expect = 4.10e-132 Identity = 204/278 (73.38%), Postives = 231/278 (83.09%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy TrEMBL
Match: A0A0A0KR53 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G312320 PE=4 SV=1) HSP 1 Score: 550 bits (1417), Expect = 1.52e-197 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy TrEMBL
Match: A0A1S4E607 (B3 domain-containing transcription factor FUS3 OS=Cucumis melo OX=3656 GN=LOC103504182 PE=4 SV=1) HSP 1 Score: 402 bits (1034), Expect = 2.31e-140 Identity = 196/206 (95.15%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy TrEMBL
Match: A0A6J1JM90 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487156 PE=4 SV=1) HSP 1 Score: 385 bits (989), Expect = 1.92e-132 Identity = 201/267 (75.28%), Postives = 228/267 (85.39%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy TrEMBL
Match: A0A6J1HEP2 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462796 PE=4 SV=1) HSP 1 Score: 385 bits (989), Expect = 1.98e-132 Identity = 204/278 (73.38%), Postives = 231/278 (83.09%), Query Frame = 0
BLAST of CsGy5G013250 vs. ExPASy TrEMBL
Match: A0A6J1JWX4 (B3 domain-containing transcription factor FUS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489075 PE=4 SV=1) HSP 1 Score: 368 bits (945), Expect = 7.93e-126 Identity = 206/284 (72.54%), Postives = 231/284 (81.34%), Query Frame = 0
BLAST of CsGy5G013250 vs. TAIR 10
Match: AT3G26790.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 268.1 bits (684), Expect = 8.1e-72 Identity = 158/286 (55.24%), Postives = 185/286 (64.69%), Query Frame = 0
BLAST of CsGy5G013250 vs. TAIR 10
Match: AT3G24650.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 133.7 bits (335), Expect = 2.4e-31 Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0
BLAST of CsGy5G013250 vs. TAIR 10
Match: AT1G28300.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 115.9 bits (289), Expect = 5.1e-26 Identity = 69/164 (42.07%), Postives = 97/164 (59.15%), Query Frame = 0
BLAST of CsGy5G013250 vs. TAIR 10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2 ) HSP 1 Score: 78.6 bits (192), Expect = 9.1e-15 Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of CsGy5G013250 vs. TAIR 10
Match: AT4G32010.1 (HSI2-like 1 ) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-14 Identity = 65/205 (31.71%), Postives = 90/205 (43.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|