CsGy5G012580 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTACGGTTTAAAACAAATTCTATCCGATAATAATTGATGTGAAGGGATAGAAAATTATAAATGATAAAATTCAAAACTTTAATATAAGTTGTAAATATTTTAATTTATTTTACTATTTTTAAAATGTCTCATTTTCCGAACTATATTATCTGTGCATGTAAGGTATTCTTTCTCCGATCACAAATTATTCCAACCCTAACCCTTTCTCTCCCCTAAAGTCCTCCGGCACATAACCAAAAAAAAAAAACTACAGGTCAAAGAAGAAAATTTGATAATTGTGTTCTTAAATTAATACTTCCTTTTGACAAGAAAGAAAATGGGCGTGGCGTCATTGGATTGAGATCATATTCTCATAAACCAAGAAACTAGGGTTTCATCTTGTCAGGGATTAGATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTAATATTCTTCTTAACTATGTTGTTTCTTTACAGATATTTCTATTTGTAATAAGTTGGAGTTCTGATGTGTTTTCATGACAGGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGCCAATCTAATTTTCTTGTTTCTTCTTTAACTGTTCTTCTGTTTATTTCAAATCCGCTGAGTGCTGCATTAGAATTCTGTTAGAATGACCGAAATTAATATCAGAATTCTTTGGGTTTTTGTATTCTAGACTTGTTTTTGCTGATCATTTTTGGATCGTTATCACTTATCAGGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGCCCTTTCCCCTCCTTTATGAAAGAGTTTCATTAATCGATCTCTAAGATTTTTACTTGTGTGTACTTTATATGAATTGTGAACAATTTGAGCAAGTTATCGGGGGTACACAATGGAATCATTCTGCATTTTGTGCATTAACACAAAAATTAAGCTTTACATGGAATTTGTCGTTCCTTGATTATTAACTTGTCTTCTGGTTTATCGGGGGTACTAAATAGTGTGAAATGCCGTTTAAAACAACCATTTGTTATAATTGAGGTGGATGTGGATATTTTCCATTGACATTTATGAAGTGTGTTCAACTGCGCATTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGGTATTTCATACCTTTGCTTTCATATTGTTTTACTTTTACCCTTTGGGATGATATTGTTATGTTATTTACTCTGGATGTGAGTTAATTATAGTCTTAGTGATTAGCTACCTAAGATGCCAGTTTCTGACAAATTTTCTGGATCCCAAATATAAGATTCTAGTGGTACCCTTGTCACCCTGTAATGTTAGAAAATGTATGCCTTTGTTCTATATTCTATGCATGTGTATAGGTATGGATCGTTAGACTACAAACTAAGTGCATGGTTGGGACTGATTATTTAACGGTTAAAATTACTTCGAAGAACACAAAATTTAATCACTCTAAGCCAATTTAACGTTTAATTTTACATTTTAAAACCCATTTCAAACTATTAAACTGGATTTTGATGAATTACTAAAGCATTTTTCGAATGATTTTAACCATTTTTTAATTACTCCCCAACATTCCTTAACATGCCCTGAGCTACCACGTGAAAGTGGGAAAAATATACTTCTGCGCTTTAGTAGACAGTATACTGTTTCTGACGAGGAATAAAAAAATGTGTAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAACGCACTTCTCAGACTGTTGCTTCTCTGCAATTGGACGTAACTTGCTTGATAAATTAACCATCAAGGATAAAGATCTTAGTCCTACGAATATTCTTTCACATCAGGATAGTCATCTCAGGACCTCAGGTTAGGGAGGGAAGAAATTCATAATTCATAGTTGTAAAGTCGGCTGAGTAACTTATGAGTCGAAGTAAGTTTTGGATATAATGATATTGATAATGTGATTTGCCCTCTTTGCCCTATCTGGCCGTGTCTAGTCTAAATGTTGAGATTGAGAACATGTACAATATTGATGTTGGAAAAATGGAAAATTACAAACTAATATTTATATGTTTTGACGTAGTTGAGATCTTATGCTTATATGTTATTAATTGATGTCTTAGCTGATTATCACCTTGCTATATACTTTGTCTCTTGTTAATATTCTGC ATTTACGGTTTAAAACAAATTCTATCCGATAATAATTGATGTGAAGGGATAGAAAATTATAAATGATAAAATTCAAAACTTTAATATAAGTTGTAAATATTTTAATTTATTTTACTATTTTTAAAATGTCTCATTTTCCGAACTATATTATCTGTGCATGTAAGGTATTCTTTCTCCGATCACAAATTATTCCAACCCTAACCCTTTCTCTCCCCTAAAGTCCTCCGGCACATAACCAAAAAAAAAAAACTACAGGTCAAAGAAGAAAATTTGATAATTGTGTTCTTAAATTAATACTTCCTTTTGACAAGAAAGAAAATGGGCGTGGCGTCATTGGATTGAGATCATATTCTCATAAACCAAGAAACTAGGGTTTCATCTTGTCAGGGATTAGATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAACGCACTTCTCAGACTGTTGCTTCTCTGCAATTGGACGTAACTTGCTTGATAAATTAACCATCAAGGATAAAGATCTTAGTCCTACGAATATTCTTTCACATCAGGATAGTCATCTCAGGACCTCAGGTTAGGGAGGGAAGAAATTCATAATTCATAGTTGTAAAGTCGGCTGAGTAACTTATGAGTCGAAGTAAGTTTTGGATATAATGATATTGATAATGTGATTTGCCCTCTTTGCCCTATCTGGCCGTGTCTAGTCTAAATGTTGAGATTGAGAACATGTACAATATTGATGTTGGAAAAATGGAAAATTACAAACTAATATTTATATGTTTTGACGTAGTTGAGATCTTATGCTTATATGTTATTAATTGATGTCTTAGCTGATTATCACCTTGCTATATACTTTGTCTCTTGTTAATATTCTGC ATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPVSAQTTTAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR* Homology
BLAST of CsGy5G012580 vs. ExPASy Swiss-Prot
Match: F4HVZ5 (Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 7.5e-84 Identity = 184/305 (60.33%), Postives = 224/305 (73.44%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy Swiss-Prot
Match: Q3TQI7 (Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 5.7e-15 Identity = 98/306 (32.03%), Postives = 146/306 (47.71%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy Swiss-Prot
Match: Q9NZ63 (Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 103/315 (32.70%), Postives = 151/315 (47.94%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy Swiss-Prot
Match: Q5RC87 (Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.2e-14 Identity = 102/315 (32.38%), Postives = 150/315 (47.62%), Query Frame = 0
BLAST of CsGy5G012580 vs. NCBI nr
Match: XP_011654560.1 (protein COP1 SUPPRESSOR 2 [Cucumis sativus] >KAE8648310.1 hypothetical protein Csa_004675 [Cucumis sativus]) HSP 1 Score: 572 bits (1473), Expect = 6.33e-205 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of CsGy5G012580 vs. NCBI nr
Match: XP_008466165.1 (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo] >KAA0050254.1 Hepatocellular carcinoma-associated antigen 59 [Cucumis melo var. makuwa] >TYJ98152.1 Hepatocellular carcinoma-associated antigen 59 [Cucumis melo var. makuwa]) HSP 1 Score: 555 bits (1430), Expect = 2.18e-198 Identity = 298/305 (97.70%), Postives = 299/305 (98.03%), Query Frame = 0
BLAST of CsGy5G012580 vs. NCBI nr
Match: XP_038877898.1 (protein COP1 SUPPRESSOR 2 [Benincasa hispida]) HSP 1 Score: 523 bits (1347), Expect = 1.00e-185 Identity = 284/306 (92.81%), Postives = 292/306 (95.42%), Query Frame = 0
BLAST of CsGy5G012580 vs. NCBI nr
Match: XP_023549511.1 (protein COP1 SUPPRESSOR 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 519 bits (1336), Expect = 4.93e-184 Identity = 280/306 (91.50%), Postives = 290/306 (94.77%), Query Frame = 0
BLAST of CsGy5G012580 vs. NCBI nr
Match: KAG6579146.1 (Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 518 bits (1335), Expect = 7.01e-184 Identity = 280/306 (91.50%), Postives = 290/306 (94.77%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy TrEMBL
Match: A0A0A0KLP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=3 SV=1) HSP 1 Score: 562 bits (1448), Expect = 3.32e-201 Identity = 305/319 (95.61%), Postives = 305/319 (95.61%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy TrEMBL
Match: A0A5D3BEG5 (Hepatocellular carcinoma-associated antigen 59 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00320 PE=3 SV=1) HSP 1 Score: 555 bits (1430), Expect = 1.06e-198 Identity = 298/305 (97.70%), Postives = 299/305 (98.03%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy TrEMBL
Match: A0A1S3CQV4 (uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 PE=3 SV=1) HSP 1 Score: 555 bits (1430), Expect = 1.06e-198 Identity = 298/305 (97.70%), Postives = 299/305 (98.03%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy TrEMBL
Match: A0A6J1K2G2 (protein COP1 SUPPRESSOR 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489492 PE=3 SV=1) HSP 1 Score: 518 bits (1334), Expect = 4.82e-184 Identity = 280/306 (91.50%), Postives = 290/306 (94.77%), Query Frame = 0
BLAST of CsGy5G012580 vs. ExPASy TrEMBL
Match: A0A6J1FKA0 (protein COP1 SUPPRESSOR 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444801 PE=3 SV=1) HSP 1 Score: 516 bits (1330), Expect = 1.96e-183 Identity = 279/306 (91.18%), Postives = 289/306 (94.44%), Query Frame = 0
BLAST of CsGy5G012580 vs. TAIR 10
Match: AT1G02330.1 (CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). ) HSP 1 Score: 312.0 bits (798), Expect = 5.3e-85 Identity = 184/305 (60.33%), Postives = 224/305 (73.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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