Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGCAGTATGAAAAAAATGGTGATGCTGTTAAAGTAAAAGCTTTCGATGATGTTAGAAGTTCAACTCAAATTGGCAATCGAGAAAGTGTACTGAAAATCCTAAAACCTAGTGACGGTGTTGCACACAAGCTTCGTTCAGAAGCACATATACAACCAACTCAGCGAACTGGAGGAAAGGGTAAAAAGTCCATCACAAGGGTTCTTGACAGAAAGTCATCTAATATGTCACTTAGTCGAGAGCGAATAAAGGAAATTTTCCAATATCATGATAACAACAATGATGGTTTTCTTAACAGAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCAGATGCAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGTAAAATTATCAAGAAGAAATAACTTTTAG
mRNA sequence
ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGCAGTATGAAAAAAATGGTGATGCTGTTAAAGTAAAAGCTTTCGATGATGTTAGAAGTTCAACTCAAATTGGCAATCGAGAAAGTGTACTGAAAATCCTAAAACCTAGTGACGGTGTTGCACACAAGCTTCGTTCAGAAGCACATATACAACCAACTCAGCGAACTGGAGGAAAGGGTAAAAAGTCCATCACAAGGGTTCTTGACAGAAAGTCATCTAATATGTCACTTAGTCGAGAGCGAATAAAGGAAATTTTCCAATATCATGATAACAACAATGATGGTTTTCTTAACAGAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCAGATGCAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGTAAAATTATCAAGAAGAAATAACTTTTAG
Coding sequence (CDS)
ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGCAGTATGAAAAAAATGGTGATGCTGTTAAAGTAAAAGCTTTCGATGATGTTAGAAGTTCAACTCAAATTGGCAATCGAGAAAGTGTACTGAAAATCCTAAAACCTAGTGACGGTGTTGCACACAAGCTTCGTTCAGAAGCACATATACAACCAACTCAGCGAACTGGAGGAAAGGGTAAAAAGTCCATCACAAGGGTTCTTGACAGAAAGTCATCTAATATGTCACTTAGTCGAGAGCGAATAAAGGAAATTTTCCAATATCATGATAACAACAATGATGGTTTTCTTAACAGAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCAGATGCAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGTAAAATTATCAAGAAGAAATAA
Protein sequence
MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK*
Homology
BLAST of CsGy5G011625 vs. NCBI nr
Match:
KAE8648233.1 (hypothetical protein Csa_018371 [Cucumis sativus])
HSP 1 Score: 303 bits (775), Expect = 3.69e-103
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 10 MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI 69
MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI
Sbjct: 1 MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI 60
Query: 70 QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG 129
QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG
Sbjct: 61 QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG 120
Query: 130 SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 164
SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA
Sbjct: 121 SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 155
BLAST of CsGy5G011625 vs. NCBI nr
Match:
KAA0065465.1 (putative calcium-binding protein CML11 [Cucumis melo var. makuwa])
HSP 1 Score: 273 bits (699), Expect = 2.14e-91
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60
MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG + V KILK SD VA
Sbjct: 1 MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
Query: 61 HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120
HKL EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +E
Sbjct: 61 HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
BLAST of CsGy5G011625 vs. NCBI nr
Match:
XP_022930007.1 (uncharacterized protein LOC111436449 [Cucurbita moschata])
HSP 1 Score: 177 bits (450), Expect = 8.97e-54
Identity = 99/172 (57.56%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGV 60
M+ISKLQASMA YEAS LIK+Y +NGD V++K+F D+ R STQ+ N+ + +ILK + V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRM 120
KL S AH K+S + SRE++KEIF+YHD++ DGFLN
Sbjct: 61 GLKLSSNAHP--------------------KTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
ELTKAFAFLGS+ PF KA YGM YADAN+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of CsGy5G011625 vs. NCBI nr
Match:
XP_023530717.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 176 bits (445), Expect = 5.15e-53
Identity = 98/172 (56.98%), Postives = 120/172 (69.77%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGV 60
M+ISKLQASMA YEAS LIK+Y +NGD V++K+F + R STQ+ N+ + +ILK + V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSGIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRM 120
KL S AH K+S + SRE++KEIF+YHD++ DGFLN
Sbjct: 61 GLKLSSNAHP--------------------KTSKLQFSREQMKEIFRYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
ELTKAFAFLGS+ PF KA YGM YADAN+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of CsGy5G011625 vs. NCBI nr
Match:
XP_023530727.1 (calmodulin-like protein 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 174 bits (442), Expect = 1.47e-52
Identity = 97/172 (56.40%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGV 60
M+ISKLQASMA YEAS +IK++ +NGD V++++F + R STQ+ N+ +L+ILK + V
Sbjct: 1 MFISKLQASMAKYEASEMIKKHIRNGDNVQLQSFSGIARDSTQLNNQGKILEILKDNKNV 60
Query: 61 AHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRM 120
KL S AH K+S + SRE++KEIF+YHDN+ DGFLN
Sbjct: 61 GLKLSSNAHP--------------------KTSKLQFSREQMKEIFRYHDNDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
ELTKAFAFLGS+ PF KA YGM YADAN+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of CsGy5G011625 vs. ExPASy TrEMBL
Match:
A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)
HSP 1 Score: 330 bits (847), Expect = 2.85e-114
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60
MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA
Sbjct: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60
Query: 61 HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120
HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME
Sbjct: 61 HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
BLAST of CsGy5G011625 vs. ExPASy TrEMBL
Match:
A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)
HSP 1 Score: 273 bits (699), Expect = 1.04e-91
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60
MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG + V KILK SD VA
Sbjct: 1 MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
Query: 61 HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120
HKL EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +E
Sbjct: 61 HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
BLAST of CsGy5G011625 vs. ExPASy TrEMBL
Match:
A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)
HSP 1 Score: 189 bits (479), Expect = 7.86e-58
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDD-VRSSTQIG-NRESVLKILKPSDG 60
M+I +LQ S A YEAS L+K+YE+NG+ V + AF+D R STQI NRE K LKP+D
Sbjct: 28 MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
Query: 61 VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120
VAHKL S A ++ + GK + I RV D K+SNM SRE+IKEIFQY+D++ DGFLN
Sbjct: 88 VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147
Query: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200
BLAST of CsGy5G011625 vs. ExPASy TrEMBL
Match:
A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)
HSP 1 Score: 177 bits (450), Expect = 4.34e-54
Identity = 99/172 (57.56%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGV 60
M+ISKLQASMA YEAS LIK+Y +NGD V++K+F D+ R STQ+ N+ + +ILK + V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRM 120
KL S AH K+S + SRE++KEIF+YHD++ DGFLN
Sbjct: 61 GLKLSSNAHP--------------------KTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
ELTKAFAFLGS+ PF KA YGM YADAN+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of CsGy5G011625 vs. ExPASy TrEMBL
Match:
A0A0A0KIY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1)
HSP 1 Score: 178 bits (452), Expect = 4.62e-54
Identity = 100/176 (56.82%), Postives = 134/176 (76.14%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVR-SSTQIGNRESVLK--ILKPSD 60
MYIS LQ S A YEAS L+K++E N + V +KAF+ + +ST+I N++++ ILKPS+
Sbjct: 1 MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60
Query: 61 G-VAHKLRSEAHIQPTQRTG-GKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGF 120
VAH L S A++ P+++ G GK + + T VLD K+SNM SRE+IKEIFQYHD++NDGF
Sbjct: 61 HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120
Query: 121 LNRMELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
LN E+TKAFAFLG++ P YKA +GMVYADAN+DGLIS+ EL+KL+DYA K K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KMQ1 | 2.85e-114 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1 | [more] |
A0A5A7VI66 | 1.04e-91 | 83.63 | Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A0A0KLF3 | 7.86e-58 | 60.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1 | [more] |
A0A6J1EP67 | 4.34e-54 | 57.56 | uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
A0A0A0KIY4 | 4.62e-54 | 56.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |