CsGy5G010530 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G010530
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Stress response protein NST1-like
Location	Gy14Chr5: 10872993 .. 10874254 (+)
RNA-Seq Expression	CsGy5G010530
Synteny	CsGy5G010530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCTTGATGATGATTACACGAGCTACAAACACGTTAAGCATGGTACCGACAAAGTAATTCTGGGAAAAGGCGAATCGAGTGAGACAGGCCAAGTGTTAAAATTTCTTGATGAGTTGGGAGCAGGAGATAGGAAGAAGAAAGTAGAAGAGGTGGTTGTGGAGTGTATGATAGACTTAGTGGTTTTGCATTTGAATGGTGCAATTATCATACGTCATGAAGCAGGTTCATCGCTTATAAGATGCTCACCATATCTCTCTGTATTTTGTGATTAATTCTATATTGCTATAGGTCATGGGTCATGATCATAGCATGTGAAATGCTCACTATGTATCTCTTCATCGTGTAATAGTTAAGTTCTCGTTGAGTACAAGTTTTCCTACTACTCGCCCAAGTGCAAGCGAACAGTAGGTTTACCTGGGTGATCCAGGGTCAAACATAGAAAATTGTTTTCAGATATTAGTTTTAGGGTCTACTTGTCGTTTAAGAGTTATGACAATTAAGTTAAAAGAATATAAAAAGAACTAAAACTACTTACTTATACCTATAGACTCATGCACATGAGAATAAATTATGGCAAGATGAAAGATTGAGCGAACTAACTTGTATGCGAGAGAAAGGTGAAGGAAGGTCTAAGCATTATTAGGCGATTAAGCAATGTGAGAGCCTTGATGTGATGTAACTTGCATAATCGGTCCATGATTAACGACTTTCTCTCAAAGTGTTTAGACGCCACACTTACTCACCTTCTCTCAAATGACTACCTTTTGGGATGCAAATGACTACACTTGCTCACTCATGATGGAGGAAAGGAGAAGAAAAGAGGAAGAGGCAAGAAGGAACTAAAGCTAAGGTCGTGGGAAGATGACACTCTCCGCCAAACATTCAAAGAAAAGTGAAAGAATATAGAGTCTCTGGTGGAAACAAAAACTAAGTTAACAGAAATTTAAACCTCCAAGCACAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA

mRNA sequence

ATGCAGCTTGATGATGATTACACGAGCTACAAACACGTTAAGCATGGTACCGACAAAGTAATTCTGGGAAAAGGCGAATCGAGTGAGACAGGCCAAGTAAATTTAAACCTCCAAGCACAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA

Coding sequence (CDS)

ATGCAGCTTGATGATGATTACACGAGCTACAAACACGTTAAGCATGGTACCGACAAAGTAATTCTGGGAAAAGGCGAATCGAGTGAGACAGGCCAAGTAAATTTAAACCTCCAAGCACAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA

Protein sequence

MQLDDDYTSYKHVKHGTDKVILGKGESSETGQVNLNLQAQEEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK*

Homology

[Close]

BLAST of CsGy5G010530 vs. NCBI nr
Match: KAE8637292.1 (hypothetical protein CSA_023558, partial [Cucumis sativus])

HSP 1 Score: 186 bits (473), Expect = 1.47e-58
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 40  QEEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLV 99
           QEEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLV
Sbjct: 1   QEEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLV 60

Query: 100 DPSQPKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK 138
           DPSQPKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK
Sbjct: 61  DPSQPKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK 99

[Close]

BLAST of CsGy5G010530 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.51e-14
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSETGQVNLNLQAQEEEEARRHERTSKECGRKKK 60
           M+LDD+   YKH+KHG  K ++G GE SE   + +  +   +          K   + K 
Sbjct: 4   MRLDDNQPKYKHLKHGASKDLVGSGEVSEKEGIQVPSKFSNQ--------VMKYLEKLKM 63

Query: 61  VAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGEAGTSRLEDVE 120
           V K K        +E+  +E ER SPLKP   P+E  LV+ +Q KK K +AGTSR +DV+
Sbjct: 64  VEKKK--------IEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNKAGTSRPKDVQ 123

Query: 121 ESEPQSAQELHKLIKTEK 138
           +    S Q+L KLIK EK
Sbjct: 124 KRSKMSTQDLDKLIKIEK 125

[Close]

BLAST of CsGy5G010530 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 4.23e-14
Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSET------GQVNLNLQAQEEEEARRHERTSKE 60
           M+LDD+    KH+KH  +KV++G  E+S+        ++    + ++E  A   E+    
Sbjct: 90  MRLDDNRPKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESV 149

Query: 61  CGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGE--AG 120
             R K VA+++EVDR+ V+VE+F  E E  SPL PR  P+E  L +   PKK K +  AG
Sbjct: 150 VTRSK-VAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKRKAG 209

Query: 121 TSRLEDVEESEPQSAQELHKLIKTEK 138
           TSR +D++     SAQ+L KLIK EK
Sbjct: 210 TSRPKDIQRGNKMSAQKLDKLIKIEK 234

[Close]

BLAST of CsGy5G010530 vs. NCBI nr
Match: KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 6.89e-12
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 5   DDYTSYKHVKHGTDKVILGKGESSETGQVNLNL------------------------QAQ 64
           D    YK VKHG  KVI    ESSET ++ +++                        Q +
Sbjct: 6   DSQPGYKCVKHGVVKVIFRVRESSETEEIEVSMEYFDRGNRLRQTFKEKKLVKIQIVQKK 65

Query: 65  EEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVD 123
           +++E        ++   + K  +N++VD L+VV E+F +E ER SPL+PR  P E +L +
Sbjct: 66  KKKELSHLSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKE 125

[Close]

BLAST of CsGy5G010530 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.59e-11
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSET-------------GQVNLNLQAQEEEEARR 60
           M+LDD+    KH+KH  +KV++G  E+S+              G+     +  E+   R+
Sbjct: 90  MRLDDNRPKNKHLKHEANKVLVGHREASKKEVERKKVEDEKRKGEERKKQKKDEDRAQRK 149

Query: 61  HERTSK----ECGRKKK-------------------VAKNKEVDRLKVVVEKFGEEFERT 120
            E  +K    +  +KKK                   VA+++EVDR+ V+VE+F  E E  
Sbjct: 150 EEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGM 209

Query: 121 SPLKPRSWPKEFKLVDPSQPKKGKGE--AGTSRLEDVEESEPQSAQELHKLIKTEK 138
           SPL PR  P+E  L +   PKK K +  AGTSR +D++     SAQ+L KLIK EK
Sbjct: 210 SPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQKLDKLIKIEK 265

[Close]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL
Match: A0A0A0KJ65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 1.23e-80
Identity = 132/155 (85.16%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSETGQV-----------------NLNLQAQEEE 60
           MQLDDDYTSYKHVKHGTDKVILGKGESSETGQV                  + +++QEEE
Sbjct: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSETGQVLKFLDELGAGDRKKKVEEVVVESQEEE 60

Query: 61  EARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQ 120
           EARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQ
Sbjct: 61  EARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQ 120

Query: 121 PKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK 138
           PKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK
Sbjct: 121 PKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK 155

[Close]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.31e-15
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSETGQVNLNLQAQEEEEARRHERTSKECGRKKK 60
           M+LDD+   YKH+KHG  K ++G GE SE   + +  +   +          K   + K 
Sbjct: 4   MRLDDNQPKYKHLKHGASKDLVGSGEVSEKEGIQVPSKFSNQ--------VMKYLEKLKM 63

Query: 61  VAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGEAGTSRLEDVE 120
           V K K        +E+  +E ER SPLKP   P+E  LV+ +Q KK K +AGTSR +DV+
Sbjct: 64  VEKKK--------IEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNKAGTSRPKDVQ 123

Query: 121 ESEPQSAQELHKLIKTEK 138
           +    S Q+L KLIK EK
Sbjct: 124 KRSKMSTQDLDKLIKIEK 125

[Close]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.05e-14
Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSET------GQVNLNLQAQEEEEARRHERTSKE 60
           M+LDD+    KH+KH  +KV++G  E+S+        ++    + ++E  A   E+    
Sbjct: 90  MRLDDNRPKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESV 149

Query: 61  CGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGE--AG 120
             R K VA+++EVDR+ V+VE+F  E E  SPL PR  P+E  L +   PKK K +  AG
Sbjct: 150 VTRSK-VAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKRKAG 209

Query: 121 TSRLEDVEESEPQSAQELHKLIKTEK 138
           TSR +D++     SAQ+L KLIK EK
Sbjct: 210 TSRPKDIQRGNKMSAQKLDKLIKIEK 234

[Close]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL
Match: A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.33e-12
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 5   DDYTSYKHVKHGTDKVILGKGESSETGQVNLNL------------------------QAQ 64
           D    YK VKHG  KVI    ESSET ++ +++                        Q +
Sbjct: 6   DSQPGYKCVKHGVVKVIFRVRESSETEEIEVSMEYFDRGNRLRQTFKEKKLVKIQIVQKK 65

Query: 65  EEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVD 123
           +++E        ++   + K  +N++VD L+VV E+F +E ER SPL+PR  P E +L +
Sbjct: 66  KKKELSHLSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKE 125

[Close]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.69e-12
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MQLDDDYTSYKHVKHGTDKVILGKGESSET-------------GQVNLNLQAQEEEEARR 60
           M+LDD+    KH+KH  +KV++G  E+S+              G+     +  E+   R+
Sbjct: 90  MRLDDNRPKNKHLKHEANKVLVGHREASKKEVERKKVEDEKRKGEERKKQKKDEDRAQRK 149

Query: 61  HERTSK----ECGRKKK-------------------VAKNKEVDRLKVVVEKFGEEFERT 120
            E  +K    +  +KKK                   VA+++EVDR+ V+VE+F  E E  
Sbjct: 150 EEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGM 209

Query: 121 SPLKPRSWPKEFKLVDPSQPKKGKGE--AGTSRLEDVEESEPQSAQELHKLIKTEK 138
           SPL PR  P+E  L +   PKK K +  AGTSR +D++     SAQ+L KLIK EK
Sbjct: 210 SPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQKLDKLIKIEK 265

The following BLAST results are available for this feature:

BLAST of CsGy5G010530 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G010530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637292.1	1.47e-58	100.00	hypothetical protein CSA_023558, partial [Cucumis sativus]	[more]
KAA0045335.1	1.51e-14	39.13	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
TYK25768.1	4.23e-14	39.73	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0043535.1	6.89e-12	35.66	hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa]	[more]
KAA0038829.1	1.59e-11	34.66	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ65	1.23e-80	85.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1	[more]
A0A5A7TVC2	7.31e-15	39.13	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	2.05e-14	39.73	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TQ54	3.33e-12	35.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TBU7	7.69e-12	34.66	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CsGy5G010530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G010530.1	CsGy5G010530.1	mRNA