CsGy5G010010 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G010010
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Uracil-DNA glycosylase
Location	Gy14Chr5: 8896876 .. 8902307 (+)
RNA-Seq Expression	CsGy5G010010
Synteny	CsGy5G010010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATGGAGTCATTGACCGTAACAAAGGACATGAGGAGACATAAGGAGGCAAGTCTCATACCATCAATTTCAAACCATCTTTGGAGAGATGAAAGGTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCACACCTACAATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGTGCTGTTGTCTTTCATCTCTTTGTTCTGTAGACTTAGTTATGCTTACTTAAATGTATCTACTTCTCTAATATATCGGTGTTGTGATTTTTCTTGCTTATTTATCATTAGATGAAAGTTATGTGAAAATAGGTTTGGGACACACATGAACTGTACAATCCATGGTCCTCAATTCGCCTTTTGGGTGAGGAAGCCCGTTTTTTTCTCTTATGGCTTGCAGGGTTTGTGCAGTCTTGTGGGTCTTATGGGGTGAGTGTAACATGTTTAAGGGGGTGGAGAGGGGATCCCAAGAAGTTATGGTCCGTTGTTTGCTTTTATGTTTCTCTTTAGACTTCGATTTTGAAGATTTTTTATAATTGTTCTATAGGTGTGATTTCGTATAATTGGAGTCCCTTCTTGTAAAGGAGTTTTTCTTTTTAGTGGACTTGCCTTTTTGTTTGCGCATGCATTCTTTAATTTTTTTCTCATCAAAAGTTGTTGATTTTACATATAAAAAAATGGATTATACAATGGATGTGGTTCCCATCACAAGGATGTGATTTTGGTGATTGCTTAGGGAATGAGGAAGTATTTTTGACATTTCGCCTTTTATTTGATTAAAAACTTCACTTCTGAATTGTTATTATGTAAAAATTTGTTAATATGTCGAGAATTTGGGTTCTTACTAGGTGACTTCTCTAAGTTGAGATATCGTATCATACAATTATTAGTTCTTGTTGAAGCATTCTAAGTGAGGTTTGTCATGACATTACTCTTATGAACGTGGACTTGAGTGGATTCGTAGGATAAGTTGATCGATTTGGGAGATTTTTCTGCATGGAAAAATGCATGATTAGTTGGTTTCTGAAAGGCTATTTTGTTAGGATGTATTTGAAGTCCTATCTGGCGTCTTTTTCATTTTTTTTTTGCTCTAAAATGATTCTTATATACATTGTAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGGTAATTTCCTCCCAGGTTTTACTCCTTCTTTTCTCAGTCTACTTTTATTTTTTAAACAAGTAAACTTATGGTGAAGGTATGATCAAAATGCTTTGTTTTGCTCTTTGTGATTGTTTTTGAGCAAGTATTTCACCATGAGTAACTCTTGACCATCTTAAAAGCTTTGTAATAGCTACATAACAGTTTAAATTTTCAGCCCCAAAGAATGATAGCGAACTTTAATGCCATCAGCAACATCTAGGACATCGAACCAGAAACTCTTCAAACACCACCAAACTGTGATGAAGAGCAACAAGGCCGGCATAGATAGCCATATCTTCAAAGCCAAAAGAGAAATTAGCTACAACTAAAGCAAAATTGTTTGAGGAACAAACTAACAAATGCGCCAGTCCTCAAAATAACCTTAAAAGAAACATCAGACCCAAAGAAGGCCAAAGTGCCCTGTCCAAGTTGCCATAACCAAACCGAAAAAACAGAAACCTAGACTTTGGATACTTTAAAGGGTGGAGTTTAAAGGGTGAAAATACTTTAAAGGGTGGAGTTTCTTCTTCTGTCACATTTCTATCAAATTTAGGGTTTCCTTAAAGTTGCCTTTTGTCCATCAAACTTTAATAAGAGTTCTATATTGTTCTATTCTGACGTAAGGATACATGCTTCCTGCATTTAGTTATCGATTAAAATTTTGGTTTTACCTATTTAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTACTTTTGTTGTATGATATTAGTTCTAAGTTCCTAACAGGGAGTGCACGACTCTGGAAAGAACGAAAATAATAACAAAATCAAGATTAAAATATAAACTGCAACCTTTAGATTTTTCTTAATGGGAAAAGAAAATGAAGACTGAGGGCTTTCACTTGAAGACTTGAAGTATTTGATAGATAAAATGGGATGAGATATTAGATAATTAGTGTAACTCAGTTTATACAAGTCTAATTGTTGACACTTAGATTAACGTGATTGATTAATATTTTGGATTTATTTCATTGTTTGTTAATTTTATCGTAAGCCTCAATAATAACTTTTTAGGAATGTCAGGAAGCTTTTGAATATTATTTTGAAGTAAACAACAAAATAACATTTTGGTCTTCAAAACCTACATGATTGAAGTACTTTGAGAGGCTAGGAGGCCTCTCTCAAAGACCATTTCCCAAAAATTGTGTACTTAAAAAAACTGTTGATTTTATTTCTAAGACTCAACTTTGACAAGCTTATATTAAGAATTACAATAAATATGTCATTGGTAATATTCTCCTTTCTCAATTGCATTTCATATTAATAGTTCACAAATTAAAAGCCTCCTTTGAATGTAAAACGCACGCCCACACATGAGGGGATGTTTTGTAAACACTTTACTATAGTGTAGTCGTTTGCTACCAATGTTGTTATGCAAGCTTTAATCTTTCAAGTATAGGAACTTTTCCTGTGAAGTACATGAAACAATTTGGGGAAAAAATGGTTTTGCTGCGTTTTAAAATCAACGTAGTGCAATTTTCATCTACTTTAGCGATCTAACGTTCTATTGTCTTGATAAAACTTACAAGAGCACAAAGAGATTTAATTTCTCTTCTTTGGGGGGCAATAACACCCTACATCACTTAGAATCTAATGTCTGAAGTGAACAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGTTAGTTTCATCGTTTAATTCCTTCATACACTTTTTGAACCTTCCTTTTCTTAAAATATTAACTAGGATTTGCTCTACCTCCAGCCATTGTATTTTATCATTTCCCTTCAGTGTAGTTCTCCCAATAACAACATTTTATTGCCAGTGCATGGCTTGGTATTTTGTGTATATCACTTGGTTTTCTGCCTTTTCTCTAAGTTAAACTTACTATGTTGGAGCGCTTTGCTCGATTTTACAAGTGATAATGGCTGGAGCATGAATTTGGTATGATTTTTCTGATTGTGAAAAAAATATTTAGCCTGCCCCAAACAAACATTTCCAAACTTTTTATGTGGTTTTGATTCATAGTAAAAAATGATTGAGAGTTCTCAAAATACATAAAAGCACTTTTGGAACATAGTTTAGATATAATGTCACTTAAAAGTATTTACTCTCGAGAATCATACCAAACTCCCACTTACCTTTTTGGCTCTTCCCTTAAGTTCTGTGGTCCATCTCTCAGAACATAGACAATTTTGTGAGGCTGTTGAAGTTTATAAATCGTTAAGAGATTATATGTTTATGTGATTCACTAGTATGAAGCTGTTTAGATGGGTGTTTTTTCATTTCCCTTGGAATTTTAGTTTGTTTACTGCCAACTTTGGATTTTCGACAGGCATTTTTCTCGAACAAACATACTACTCAAGGAAATGGGTACTGCTTCCATAGATTGGCAACTTTGATCCAAACATGTGAACCATTGAAGTTCATTTTTTGTGGATACACTTTAAGATCCCCAGTCATGCTCAGACCTGCTTGCTTGATGACTTTTTGTTGAATTTTCACTTGTCGCTTCACCGTTGTTTAAATGTCGAGATGCCCATCCTTTATCTTTTTGTATTATAGTGTTTATTCCTGCTGTTTGATTTTTATTCCAAAGCAGCAGCAGAACCGTTCTTTTTATAAAATAGGGTAAAATTAGAAGTTAGTCTTTCATATGGTGACCAGTGGTTTTCATAAATCAGGCTAGATGTTTTGTTGTACCTAACTTTTGGCGGTTCTCTCAATCCTATCATGGGAAGTGGGAAGATTCATATTAGTCCCTGTCGAGTGTGGATGGAAGGATATGGGTAGAACATTAACTGCCCTTCTTGTGCTTTCAATAGTAAAGTTGTAATTTTGAAGAAAGAAAGATGACTTGTAAAACAAAGAAGAAAAGAAAACACATGTGCCTCCAATGCTTAAGTCATAATCCAGGGAGCAACTTACCTTTTTTGGTTGTATAATCTCTTATTTATAGAGGGTTGAACCCTTGGCTTACCAGTCTAAAAGGGACTCGGAGATGATGATTTGAACTTATCAGAGTCTTAGAGCATGGACTTTCGTGCAAGGGAAGTGGATGGCCTGGTCGAGGTGGGTCTCTTAGATTGTGGACCTATAACTCTCCTTTTCTGTTTCTTGGCATGTTTCTTGCATTTCATTGACCTTTAGGTGACTCTTGCTTTGTTGCTATTGAAATATGATAAACACACCAGGTTTAAAGAAATGCAAGTAACAAGGAAAGGAAAGACCATTAGAATGAGAGTTATTAGGGTGAGTGGCCCAATTGGCCCAGCTTATCAAGTCAAAAAGGCGAAGGCTATCCACTTCCTTTCACAGAGGTTCACTTCTTGTGGGTCATGATCTAATTTGCAATTGGCTTTAATAAGCATCTCTCGGTCCTTTTTGGATCAGGAACTCTAGGGTCCTCCTATATAAATAAGAGATCATAACTTCATGTTAGAAAGATCAATGCAACTATGTATGTATCATGCACCATGGAAATTTTATGCAATCTGATAACTCAAG

mRNA sequence

CCCATGGAGTCATTGACCGTAACAAAGGACATGAGGAGACATAAGGAGGCAAGTCTCATACCATCAATTTCAAACCATCTTTGGAGAGATGAAAGGTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCACACCTACAATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATACTACTCAAGGAAATGGGTACTGCTTCCATAGATTGGCAACTTTGATCCAAACATGTGAACCATTGAAGTTCATTTTTTGTGGATACACTTTAAGATCCCCAGTCATGCTCAGACCTGCTTGCTTGATGACTTTTTGTTGAATTTTCACTTGTCGCTTCACCGTTGTTTAAATGTCGAGATGCCCATCCTTTATCTTTTTGTATTATAGTGTTTATTCCTGCTGTTTGATTTTTATTCCAAAGCAGCAGCAGAACCGTTCTTTTTATAAAATAGGGTAAAATTAGAAGTTAGTCTTTCATATGGTGACCAGTGGTTTTCATAAATCAGGCTAGATGTTTTGTTGTACCTAACTTTTGGCGGTTCTCTCAATCCTATCATGGGAAGTGGGAAGATTCATATTAGTCCCTGTCGAGTGTGGATGGAAGGATATGGGTAGAACATTAACTGCCCTTCTTGTGCTTTCAATAGTAAAGTTGTAATTTTGAAGAAAGAAAGATGACTTGTAAAACAAAGAAGAAAAGAAAACACATGTGCCTCCAATGCTTAAGTCATAATCCAGGGAGCAACTTACCTTTTTTGGTTGTATAATCTCTTATTTATAGAGGGTTGAACCCTTGGCTTACCAGTCTAAAAGGGACTCGGAGATGATGATTTGAACTTATCAGAGTCTTAGAGCATGGACTTTCGTGCAAGGGAAGTGGATGGCCTGGTCGAGGTGGGTCTCTTAGATTGTGGACCTATAACTCTCCTTTTCTGTTTCTTGGCATGTTTCTTGCATTTCATTGACCTTTAGGTGACTCTTGCTTTGTTGCTATTGAAATATGATAAACACACCAGGTTTAAAGAAATGCAAGTAACAAGGAAAGGAAAGACCATTAGAATGAGAGTTATTAGGGTGAGTGGCCCAATTGGCCCAGCTTATCAAGTCAAAAAGGCGAAGGCTATCCACTTCCTTTCACAGAGGTTCACTTCTTGTGGGTCATGATCTAATTTGCAATTGGCTTTAATAAGCATCTCTCGGTCCTTTTTGGATCAGGAACTCTAGGGTCCTCCTATATAAATAAGAGATCATAACTTCATGTTAGAAAGATCAATGCAACTATGTATGTATCATGCACCATGGAAATTTTATGCAATCTGATAACTCAAG

Coding sequence (CDS)

ATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATACTACTCAAGGAAATGGGTACTGCTTCCATAGATTGGCAACTTTGA

Protein sequence

MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL*

Homology

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BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot
Match: Q9LIH6 (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-110
Identity = 209/330 (63.33%), Postives = 245/330 (74.24%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  ADISASQISRMETNKWIARSKRNLKTCSDRV--SKWENGC-VKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL  CS+RV  +K E  C V L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FQKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 308
            NSHAK+GWEQFTDAVI++ISQ+KEG++FLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSRTNILLKEMGTASIDWQL 319
           ANRGFF CRHFSR N LL+EMG   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

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BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot
Match: A7I0A8 (Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) OX=360107 GN=ung PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.2e-72
Identity = 137/227 (60.35%), Postives = 164/227 (72.25%), Query Frame = 0


Query: 92  VKLEELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFD 151
           +KLE + +E++W E L GEF  PY L + K     + +SGV IYPP +LIFNA N TPFD
Sbjct: 3   IKLENIKIEKSWKEVLKGEFLSPYFLEI-KEKLVCLKNSGVTIYPPGNLIFNAFNLTPFD 62

Query: 152 RVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWA 211
           +VKVVILGQDPYH   QAMGLSFSVP+ V+IP SL+NIFKE+  DLG + P+ G+L  WA
Sbjct: 63  KVKVVILGQDPYHEVNQAMGLSFSVPKDVRIPPSLINIFKEINSDLGINEPNCGDLTFWA 122

Query: 212 VQGVLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLI 271
            QGVLLLNA LSV    ANSH   GW+ FTDAVIKT+SQK+E I+F+LWGN A+AK  LI
Sbjct: 123 KQGVLLLNASLSVSAKIANSHKNFGWQIFTDAVIKTLSQKRENIVFMLWGNFAKAKATLI 182

Query: 272 DEKKHHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL 319
           D KKH IL AAHPS L A   FFGC+HFS+ N  L   G + I+W L
Sbjct: 183 DAKKHLILTAAHPSPL-AGGAFFGCKHFSKCNNFLISRGISPINWDL 227

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BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot
Match: C1DQR0 (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.9e-72
Identity = 129/224 (57.59%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 95  EELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EF+KPY   L  F++ E  ++G  IYPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRRE-KAAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQG 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKEL+ DL   IP HG+L +WA QG
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 VLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEK 274
           VLLLN  L+V +  A SHA  GW++FTD VI+ +SQ++E ++F+LWG+ AQ+K RLID  
Sbjct: 126 VLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSS 185

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL 319
           KH +L +AHPS LSA+RGF G  HFSR N  L++ G   IDW L
Sbjct: 186 KHLVLCSAHPSPLSAHRGFIGNGHFSRANQFLEQHGLTPIDWHL 228

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BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot
Match: A6L7T5 (Uracil-DNA glycosylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) OX=435590 GN=ung PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.8e-71
Identity = 125/218 (57.34%), Postives = 159/218 (72.94%), Query Frame = 0


Query: 99  VEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVIL 158
           +EE+W + L  EF+K Y + L +FV++E  ++   IYPP   IFNA N  PFD+VKVVI+
Sbjct: 5   IEESWKQHLAPEFEKDYFIRLTEFVRSEYQTA--TIYPPGRFIFNAFNLCPFDKVKVVII 64

Query: 159 GQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLL 218
           GQDPYHGPGQA GL FSV +GV  P SL NIFKE++ DLG  IP+ GNL +WA QGVLLL
Sbjct: 65  GQDPYHGPGQAHGLCFSVNDGVPFPPSLQNIFKEIQSDLGAPIPTSGNLTRWANQGVLLL 124

Query: 219 NAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHI 278
           NA L+VR HQA SH +RGWE+FTDA I+ +++++E I+F+LWG+ AQ K   ID  KH +
Sbjct: 125 NATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEQRENIVFILWGSYAQKKGAFIDRNKHLV 184

Query: 279 LKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDW 317
           L +AHPS LSA  GFFG +HFSRTN  L+  G   I+W
Sbjct: 185 LASAHPSPLSAYNGFFGNKHFSRTNEYLQAHGQTPIEW 220

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BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot
Match: Q88N05 (Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=ung PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.8e-71
Identity = 128/224 (57.14%), Postives = 159/224 (70.98%), Query Frame = 0


Query: 95  EELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W  AL GEF +PY   L +F++ E  ++G  IYPP  LIFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLDQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IPSHG L  WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQG 124

Query: 215 VLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEK 274
           VLLLN  ++V +  A SHAK+GWE FTD +I+ +S++   ++FLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL 319
           KH +LK+ HPS LSA RGF GC HFSR N  L++ G   IDW L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFIGCGHFSRANSFLEQRGLGPIDWAL 227

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BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_004140430.1 (uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical protein Csa_004717 [Cucumis sativus])

HSP 1 Score: 635 bits (1639), Expect = 8.63e-230
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTNILLKEMGTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_008465227.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 623 bits (1606), Expect = 9.26e-225
Identity = 308/318 (96.86%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTNILLKE+GTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_008465225.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 609 bits (1570), Expect = 7.20e-219
Identity = 308/343 (89.80%), Postives = 316/343 (92.13%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKK 300
                   VR+HQANSHAKRGWEQFTDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL 318
           HHILKAAHPSGLSANRGFFGCRHFSRTNILLKE+GTASIDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_038891400.1 (uracil-DNA glycosylase, mitochondrial [Benincasa hispida])

HSP 1 Score: 598 bits (1542), Expect = 2.79e-214
Identity = 295/318 (92.77%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLAS S D+SA+Q
Sbjct: 46  MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASFSIDMSAAQ 105

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGC+KLE+LLVEETWFEALPGEF+KPYA+NLC
Sbjct: 106 KSRMETNKWMARSKRNLKIVSDRVSKWENGCMKLEDLLVEETWFEALPGEFEKPYAVNLC 165

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 166 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 225

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNL KWAVQGVLLLN VLSVRKHQANSHAK+GWEQF
Sbjct: 226 KIPSSLLNIFKELKDDLGCSIPSHGNLEKWAVQGVLLLNTVLSVRKHQANSHAKKGWEQF 285

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA+RGFFGCRHFS
Sbjct: 286 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSASRGFFGCRHFS 345

Query: 301 RTNILLKEMGTASIDWQL 318
           RTN+LLKE+GTASIDWQL
Sbjct: 346 RTNVLLKELGTASIDWQL 363

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_022981553.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 595 bits (1534), Expect = 8.73e-214
Identity = 293/318 (92.14%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASL SKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARS RNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEFQKPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTN+LLKE+G  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL
Match: A0A0A0KMG3 (Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 635 bits (1639), Expect = 4.18e-230
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTNILLKEMGTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL
Match: A0A1S3CPW3 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 623 bits (1606), Expect = 4.48e-225
Identity = 308/318 (96.86%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTNILLKE+GTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL
Match: A0A1S3CND7 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 609 bits (1570), Expect = 3.49e-219
Identity = 308/343 (89.80%), Postives = 316/343 (92.13%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKK 300
                   VR+HQANSHAKRGWEQFTDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKEMGTASIDWQL 318
           HHILKAAHPSGLSANRGFFGCRHFSRTNILLKE+GTASIDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL
Match: A0A6J1J2E4 (Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1)

HSP 1 Score: 595 bits (1534), Expect = 4.23e-214
Identity = 293/318 (92.14%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASL SKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARS RNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEFQKPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTN+LLKE+G  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL
Match: A0A6J1EEH8 (Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1)

HSP 1 Score: 588 bits (1515), Expect = 3.33e-211
Identity = 290/318 (91.19%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASL SKTRTLIDIFQPALSKR+KTSQTLKTLAT D+K DS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEF KPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TD VIKTISQ KEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDVVIKTISQNKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKEMGTASIDWQL 318
           RTN+LLKE+G  +IDWQL
Sbjct: 301 RTNVLLKELGIDAIDWQL 318

[Close]

BLAST of CsGy5G010010 vs. TAIR 10
Match: AT3G18630.1 (uracil dna glycosylase )

HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-111
Identity = 209/330 (63.33%), Postives = 245/330 (74.24%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  ADISASQISRMETNKWIARSKRNLKTCSDRV--SKWENGC-VKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL  CS+RV  +K E  C V L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FQKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 308
            NSHAK+GWEQFTDAVI++ISQ+KEG++FLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSRTNILLKEMGTASIDWQL 319
           ANRGFF CRHFSR N LL+EMG   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

The following BLAST results are available for this feature:

BLAST of CsGy5G010010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH6	1.7e-110	63.33	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=...	[more]
A7I0A8	5.2e-72	60.35	Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568...	[more]
C1DQR0	6.9e-72	57.59	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=...	[more]
A6L7T5	5.8e-71	57.34	Uracil-DNA glycosylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JC...	[more]
Q88N05	5.8e-71	57.14	Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCI...	[more]

BLAST of CsGy5G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140430.1	8.63e-230	100.00	uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical...	[more]
XP_008465227.1	9.26e-225	96.86	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_008465225.1	7.20e-219	89.80	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_038891400.1	2.79e-214	92.77	uracil-DNA glycosylase, mitochondrial [Benincasa hispida]	[more]
XP_022981553.1	8.73e-214	92.14	uracil-DNA glycosylase, mitochondrial [Cucurbita maxima]	[more]

BLAST of CsGy5G010010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG3	4.18e-230	100.00	Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1	[more]
A0A1S3CPW3	4.48e-225	96.86	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
A0A1S3CND7	3.49e-219	89.80	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
A0A6J1J2E4	4.23e-214	92.14	Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1	[more]
A0A6J1EEH8	3.33e-211	91.19	Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1	[more]

BLAST of CsGy5G010010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18630.1	1.2e-111	63.33	uracil dna glycosylase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 146..306 e-value: 6.2E-39 score: 145.3
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 151..305 e-value: 6.1E-24 score: 84.8
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 146..306 e-value: 6.2E-39 score: 145.3
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 79..318 e-value: 9.5E-97 score: 325.3
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 98..318
IPR002043	Uracil-DNA glycosylase family 1	TIGRFAM	TIGR00628	TIGR00628	coord: 101..310 e-value: 2.5E-78 score: 260.7
IPR002043	Uracil-DNA glycosylase family 1	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 34..318
IPR002043	Uracil-DNA glycosylase family 1	HAMAP	MF_00148	UDG	coord: 100..317 score: 38.558659
IPR002043	Uracil-DNA glycosylase family 1	CDD	cd10027	UDG-F1-like	coord: 115..316 e-value: 1.56687E-128 score: 362.922
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G010010.2	CsGy5G010010.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0097510	base-excision repair, AP site formation via deaminated base removal
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds