CsGy5G009643 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G009643
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCystatin/monellin superfamily protein
LocationGy14Chr5: 8351729 .. 8352221 (-)
RNA-Seq ExpressionCsGy5G009643
SyntenyCsGy5G009643
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATTAACCATATTAAACGATCCAAATATCATGAGTTGTGTACAAGTACCTCCAAATACTCATGACTTGATTAAGGATGTCCATAGCCCAGACGTAGTAGAAGCTGGAAAGGTAGCAGTGGAAGAACATAACAAGAAAGAAAATGACAATTTAGTTTTCATTCGTGTAGTGAGTGCTATAGCACCCCGAGCTCTTATTTTTATTAAATTGTGGTCATTTATCCTTGTGATAGAAGCTAAAACTTGCAATGGATTTCCTGTCACATATGTGGTTGAAATAGATAAGTATCTTACAATTCCAGAGGAAAGCTATAAACTTATCAGGTTTGAAGCAGTACTCGAGTATAAGTAGTATTAGATTGCTCTCCCTATCTTCAGAATAATATGCCCTATATATATATAAAAGTAAGGGGCATTATTGTGTTTAATTACCTATATGAAAATGGTATAGCCATACATACTGAAATAATCAATGATACTTACCTAATAATGG

mRNA sequence

CTAATTAACCATATTAAACGATCCAAATATCATGAGTTGTGTACAAGTACCTCCAAATACTCATGACTTGATTAAGGATGTCCATAGCCCAGACGTAGTAGAAGCTGGAAAGGTAGCAGTGGAAGAACATAACAAGAAAGAAAATGACAATTTAGTTTTCATTCGTGTAGTGAGTGCTATAGCACCCCGAGCTCTTATTTTTATTAAATTGTGGTCATTTATCCTTGTGATAGAAGCTAAAACTTGCAATGGATTTCCTGTCACATATGTGGTTGAAATAGATAAGTATCTTACAATTCCAGAGGAAAGCTATAAACTTATCAGGTTTGAAGCAGTACTCGAGTATAAGTAGTATTAGATTGCTCTCCCTATCTTCAGAATAATATGCCCTATATATATATAAAAGTAAGGGGCATTATTGTGTTTAATTACCTATATGAAAATGGTATAGCCATACATACTGAAATAATCAATGATACTTACCTAATAATGG

Coding sequence (CDS)

ATGAGTTGTGTACAAGTACCTCCAAATACTCATGACTTGATTAAGGATGTCCATAGCCCAGACGTAGTAGAAGCTGGAAAGGTAGCAGTGGAAGAACATAACAAGAAAGAAAATGACAATTTAGTTTTCATTCGTGTAGTGAGTGCTATAGCACCCCGAGCTCTTATTTTTATTAAATTGTGGTCATTTATCCTTGTGATAGAAGCTAAAACTTGCAATGGATTTCCTGTCACATATGTGGTTGAAATAGATAAGTATCTTACAATTCCAGAGGAAAGCTATAAACTTATCAGGTTTGAAGCAGTACTCGAGTATAAGTAG

Protein sequence

MSCVQVPPNTHDLIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKLWSFILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEYK*
Homology
BLAST of CsGy5G009643 vs. NCBI nr
Match: KAE8648094.1 (hypothetical protein Csa_004738 [Cucumis sativus])

HSP 1 Score: 212 bits (539), Expect = 4.33e-69
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query: 1   MSCVQVPPNTHDLIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKL 60
           MSCVQVPPNTHDLIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKL
Sbjct: 1   MSCVQVPPNTHDLIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKL 60

Query: 61  WSFILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEYK 106
           WSFILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEYK
Sbjct: 61  WSFILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEYK 106

BLAST of CsGy5G009643 vs. NCBI nr
Match: KAE8648095.1 (hypothetical protein Csa_004720 [Cucumis sativus])

HSP 1 Score: 166 bits (419), Expect = 8.70e-51
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 0

Query: 1   MSCVQVPPNTHDLIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKL 60
           MSCVQV PNTHDLIKDVHSP+V+EAGK+AV+EHNKKENDNLVF RVVS +APRA+I   L
Sbjct: 1   MSCVQVLPNTHDLIKDVHSPNVIEAGKIAVDEHNKKENDNLVFTRVVSGLAPRAIIGTIL 60

Query: 61  WSFILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEYK 106
           WS+ILVIEAK C+G+PV YV +I KYLTIPE SY+L+ F+A+L YK
Sbjct: 61  WSYILVIEAKNCDGYPVAYVAKIVKYLTIPENSYELVSFQAILGYK 106

BLAST of CsGy5G009643 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 50.4 bits (119), Expect = 2.96e-05
Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 0

Query: 14  IKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKLWS------FILVI 73
           IKD++ P V E G + V++HNKK  +NL F+RVV+ +      F+  +S      + LV+
Sbjct: 10  IKDINDPQVQEIGNLTVDDHNKKTGENLKFVRVVNGLFAG---FVDPFSPLGGTVYELVL 69

Query: 74  EAKTCNGFPVTYVVEIDKYLTIPEES--YKLIRFEAVLEYK 106
           EA        TY V++    TI      Y    FE VL+Y+
Sbjct: 70  EAINAGKINWTYKVKVSASTTIRPLGVVYNFQSFEPVLQYE 107

BLAST of CsGy5G009643 vs. NCBI nr
Match: KAA0040521.1 (Cystatin [Cucumis melo var. makuwa] >TYK05563.1 Cystatin [Cucumis melo var. makuwa])

HSP 1 Score: 49.7 bits (117), Expect = 5.30e-05
Identity = 33/92 (35.87%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 14  IKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAP--RALIFIKLWSFILVIEAKT 73
           IKDV S ++   G+ AV EHN+++ +NL F++V++      R +  I    F +V+ AK 
Sbjct: 14  IKDVDSEEIQGLGEFAVREHNEEKGENLEFVKVINGFEQGRRGVRII----FTIVLSAKN 73

Query: 74  CNGFPVTYVVEIDKYLTIPEESYKLIRFEAVL 103
           CNG   TY     K       + +L+ FEAVL
Sbjct: 74  CNGIIWTYKA---KVFFNQRAAVRLLEFEAVL 98

BLAST of CsGy5G009643 vs. NCBI nr
Match: KAF8093897.1 (hypothetical protein N665_0375s0014 [Sinapis alba])

HSP 1 Score: 46.6 bits (109), Expect = 9.16e-04
Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 13 LIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKLWSFILVIEAKTC 72
          LIKDV +P+V E  K A++EHN + N+NLVF+ ++     R L+   ++   L+I AK  
Sbjct: 30 LIKDVSAPNVKEVAKYAIDEHNSESNENLVFVEIIEG--KRQLLSAIIYD--LIIAAKNN 87

Query: 73 NG 74
           G
Sbjct: 90 GG 87

BLAST of CsGy5G009643 vs. ExPASy TrEMBL
Match: A0A5A7TFU6 (Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00010 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.57e-05
Identity = 33/92 (35.87%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 14  IKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIAP--RALIFIKLWSFILVIEAKT 73
           IKDV S ++   G+ AV EHN+++ +NL F++V++      R +  I    F +V+ AK 
Sbjct: 14  IKDVDSEEIQGLGEFAVREHNEEKGENLEFVKVINGFEQGRRGVRII----FTIVLSAKN 73

Query: 74  CNGFPVTYVVEIDKYLTIPEESYKLIRFEAVL 103
           CNG   TY     K       + +L+ FEAVL
Sbjct: 74  CNGIIWTYKA---KVFFNQRAAVRLLEFEAVL 98

BLAST of CsGy5G009643 vs. ExPASy TrEMBL
Match: A0A6J0MCI3 (cysteine proteinase inhibitor 4-like OS=Raphanus sativus OX=3726 GN=LOC108840944 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.23e-04
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 0

Query: 14 IKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVS 48
          IKDV +P+V+E  K A++EHN + NDNL+F+ +V 
Sbjct: 31 IKDVSAPNVIEVAKYAIDEHNSETNDNLMFVEIVE 65

BLAST of CsGy5G009643 vs. ExPASy TrEMBL
Match: A0A0A0L3W1 (Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.60e-04
Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 0

Query: 9   NTHDLIKDVHSPDVVEA--GKVAVEEHNKKENDNLVFIRVVSAIAPRALIFIKLWS---- 68
           +T   I+D++    V++  G++AVE+HNKK  DNL  + VV+ +  R+ IF++  S    
Sbjct: 17  HTSKPIEDINDDLQVQSIIGQLAVEDHNKKTGDNLELVDVVNGL--RSGIFVQPGSTHEG 76

Query: 69  --FILVIEAKTCNGFPVTYVVEIDKYLTIPEESYKLIRFEAVLEY 105
             + L++EAKT  G   TYV ++ +        Y+   FE +L Y
Sbjct: 77  ILYHLLVEAKTIEGINWTYVAKLLELYVGCRIRYEFKSFEPLLPY 119

BLAST of CsGy5G009643 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 0

Query: 14 IKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVV 48
          IK+V  PDVV   K A+EEHNK+  + LVF++VV
Sbjct: 35 IKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVV 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8648094.14.33e-69100.00hypothetical protein Csa_004738 [Cucumis sativus][more]
KAE8648095.18.70e-5174.53hypothetical protein Csa_004720 [Cucumis sativus][more]
KAE8649716.12.96e-0534.65hypothetical protein Csa_012476 [Cucumis sativus][more]
KAA0040521.15.30e-0535.87Cystatin [Cucumis melo var. makuwa] >TYK05563.1 Cystatin [Cucumis melo var. maku... [more]
KAF8093897.19.16e-0440.32hypothetical protein N665_0375s0014 [Sinapis alba][more]
Match NameE-valueIdentityDescription
A0A5A7TFU62.57e-0535.87Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00010 PE=4 S... [more]
A0A6J0MCI36.23e-0451.43cysteine proteinase inhibitor 4-like OS=Raphanus sativus OX=3726 GN=LOC108840944... [more]
A0A0A0L3W17.60e-0433.33Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE... [more]
Match NameE-valueIdentityDescription
AT4G16500.11.6e-0455.88Cystatin/monellin superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 14..49
e-value: 5.3E-8
score: 33.1
NoneNo IPR availableGENE3D3.10.450.10coord: 9..106
e-value: 5.6E-10
score: 41.1
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 14..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G009643.1CsGy5G009643.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity