CsGy5G008310 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G008310
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description40S ribosomal protein S4
LocationGy14Chr5: 6166826 .. 6169824 (+)
RNA-Seq ExpressionCsGy5G008310
SyntenyCsGy5G008310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCAGTCCAAAAGTCCGTCCAACTAATTCTCCCAAAAAGCCCAGCCCAAATATTCCTCTATGAATAACCTAGGGTTTTCTTAAACTCAAACTCTTTAGTCTCTACCCCTGCAGCGGCCGGCCATCTTCTCCTCATCTGCTCCGTGGAACATCCCGTTTCGACAACATGGTAAGTGGATCCGTCCTCAATTCCAGAAATACGCACGCAATCGATGAGGTTTTCCGATTAAATTAATGTGTATGTATGGGTTTGACAGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGTGAGTTTAATTTTTATAGTCTCTGATTTTTGTGTACTTTTAGTTCTGTGGTTTTGATGTTGAGTCCCTTTTGTAGGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGGTATGCTCATCTCAAACTCAAACTCAATATTGCTTTTATTTGAATAATTGTTGGGTGTTGCATTCTTCGTCTATCATCTAAATTTTAGTTTTAAGGATATATGGGGAGTTTCAACTTTTGCTTCAATGCTGACTTGCTTCCAACATAACTCAAAAACATTTTTTTAATGAATATTTCGACCGTCAAAACTACTCTTTCATACAAATGGGGAATGCATCTTCAACTCTATCACCAATCTTACTATTTGCTGCTAACAAACACTTGCGGTCACTTGTTATTGCATGGAAATTGTTTGTTTGGAACTGCTCTGTCTCCTAGTTATTGTATAGTATGCATTCTGTTTAATAGTTTTATAGGCTTAACAATTCTATTTGTTCTAGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGGTTTGTTATTTTCACTTATTATTTCTTACGACAATTCTGTTTATAGAATCAGAATGAATGTATGCTGCCCAAGTAAATACCATATCTTAAAACTGTTTTGAACTTTTCTATATCACTTTTGTAAGTCAACTGTATAGTTGTTTAATATCTGTTAGGCCACCGATTATCCTTCAATATAGGAAGAGGCAAGTCAGTATGGTTAAGATTGATTCTGGAATGTTTAAAATGTGTTTGATCACACAAAATAAAATTAATATTAAATTTTATATTTCTAAATGCAACTTTCATCTGATGAAAATTGATATTGAATGATGAAAAGCATATTTCAGAATTCATAGTACTCTTGAGGTGACAAATCTGATTTTAATCATATCGAAATCACTCTTGTACATGACTTAGTTACATGGGAACGATTTACAGCTTTAATGCTGGCATTGTTGGGTGCGGATGATTAATAGAAAGGGGAAGTTGTTTGTACGAGTAGAAGGGAGCAGTAGTATAAATATATGAGAATCGGGGAGGTTCTCATCTTTTTCATTTTATGCTTTTGGCATCAGAGAACTTGTATTGCCTTAGGAAAATTTCCTTTTCAATACTAATACATAGTGACGGTGATCCTTACAATGCCATTTGATATGGTCTTTGCAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATACGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCAACTGGGCATGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATCGGGAAGGGGACAAAGCCATGGGTGTCCCTCCCTAAGGGCAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTCACCGCTTAAGAGTTCTGAGTTATTACTAAATTGTAGTCTTGAGTTTTTTAATCAGTTTTGGTAGACACATACCTTTCTCGAATTTGCTCTCCTATTATGCCTAAGTTTGTATTTTGAGACAATTTATTTCTACCAGAAATATTGGTGAGGCCGTTACTTCTTTGATTTTGTTTTTAAAGAACACTTTTCGCATATTCATAGTTGTGTAATGTGTTGTGACTCTGCTCTATAGCCTCATTTATCTGATCTATTGTCATTTTTTATATTAGTATTTATTATTGGCTGGTCTTTTTTTTTTTTTTGAAAAAACTTATAATCTTTCTTCAATCCAATTATGTCTACTGTACATTGTGTACTGTCCACAAGTTAATATATATGCATTGATAGTTGACACAAAAATTAAGTTTTTTCATTTGAGTTCTTTTCCAAGCCTACTAGGTAAAATGGGGTTTTGAGGAGAGATTGTTTTCTTTATTTGAGTTCATTTCCATGCCTACTAGGTAAATGGGGTCTTAAGAGATTGTTGTGTTAGCAAATATTTGTTGCCTTTATGGTTTTGTGTTCTCATCAGAGACCCCACCATTGATGGTTACATTTCTATGTTTGACGTTAACAGGGCATTGTTTGGTTTTTTAGCCTATAGTCTGACTAGAATGAATAAACTTCATTAATACCCTCCTCTTGACCATCTCCTCCTTTCTAACTGATGCATCGTCATCACACAAGTTAATACTCTCCTCCTTTCTAACCGTCATCACACAAGTTAATCACCACGAGTTAAGTATTTTGTAAAAATTCGAACTTAGATTTATAAATCTTGATGCCTAGAGATCATTACGGGGTGCACTTATATTT

mRNA sequence

GTGCAGTCCAAAAGTCCGTCCAACTAATTCTCCCAAAAAGCCCAGCCCAAATATTCCTCTATGAATAACCTAGGGTTTTCTTAAACTCAAACTCTTTAGTCTCTACCCCTGCAGCGGCCGGCCATCTTCTCCTCATCTGCTCCGTGGAACATCCCGTTTCGACAACATGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATACGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCAACTGGGCATGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATCGGGAAGGGGACAAAGCCATGGGTGTCCCTCCCTAAGGGCAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTCACCGCTTAAGAGTTCTGAGTTATTACTAAATTGTAGTCTTGAGTTTTTTAATCAGTTTTGGTAGACACATACCTTTCTCGAATTTGCTCTCCTATTATGCCTAAGTTTGTATTTTGAGACAATTTATTTCTACCAGAAATATTGGTGAGGCCGTTACTTCTTTGATTTTGTTTTTAAAGAACACTTTTCGCATATTCATAGTTGTGTAATGTGTTGTGACTCTGCTCTATAGCCTCATTTATCTGATCTATTGTCATTTTTTATATTAGTATTTATTATTGGCTGGTCTTTTTTTTTTTTTTGAAAAAACTTATAATCTTTCTTCAATCCAATTATGTCTACTGTACATTGTGTACTGTCCACAAGTTAATATATATGCATTGATAGTTGACACAAAAATTAAGTTTTTTCATTTGAGTTCTTTTCCAAGCCTACTAGGTAAAATGGGGTTTTGAGGAGAGATTGTTTTCTTTATTTGAGTTCATTTCCATGCCTACTAGGTAAATGGGGTCTTAAGAGATTGTTGTGTTAGCAAATATTTGTTGCCTTTATGGTTTTGTGTTCTCATCAGAGACCCCACCATTGATGGTTACATTTCTATGTTTGACGTTAACAGGGCATTGTTTGGTTTTTTAGCCTATAGTCTGACTAGAATGAATAAACTTCATTAATACCCTCCTCTTGACCATCTCCTCCTTTCTAACTGATGCATCGTCATCACACAAGTTAATACTCTCCTCCTTTCTAACCGTCATCACACAAGTTAATCACCACGAGTTAAGTATTTTGTAAAAATTCGAACTTAGATTTATAAATCTTGATGCCTAGAGATCATTACGGGGTGCACTTATATTT

Coding sequence (CDS)

ATGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATACGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCAACTGGGCATGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATCGGGAAGGGGACAAAGCCATGGGTGTCCCTCCCTAAGGGCAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTCACCGCTTAA

Protein sequence

MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSAVTA*
Homology
[Close]
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 4.7e-143
Identity = 245/261 (93.87%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-143
Identity = 245/261 (93.87%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-143
Identity = 245/264 (92.80%), Postives = 258/264 (97.73%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIE+ARKRLA+QSA  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.1e-142
Identity = 243/261 (93.10%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 4.9e-140
Identity = 243/261 (93.10%), Postives = 253/261 (96.93%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKT+E+FRLLYDTKGRF LH+I  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
            KGIKL+IIEEARKRLA+Q+A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of CsGy5G008310 vs. NCBI nr
Match: XP_011655007.1 (40S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 40S ribosomal protein S4-3 [Cucumis sativus] >KGN50688.1 hypothetical protein Csa_005820 [Cucumis sativus] >KGN50692.1 hypothetical protein Csa_005872 [Cucumis sativus])

HSP 1 Score: 528 bits (1359), Expect = 6.34e-189
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKLTIIEEARKRLASQSAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]
BLAST of CsGy5G008310 vs. NCBI nr
Match: XP_008454823.1 (PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >KAA0035892.1 40S ribosomal protein S4-3 [Cucumis melo var. makuwa] >TYK19047.1 40S ribosomal protein S4-3 [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1356), Expect = 1.82e-188
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. NCBI nr
Match: XP_038891309.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 522 bits (1345), Expect = 8.64e-187
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. NCBI nr
Match: XP_038893437.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 522 bits (1344), Expect = 1.23e-186
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+E+FRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. NCBI nr
Match: XP_022146851.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 521 bits (1341), Expect = 3.52e-186
Identity = 257/264 (97.35%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKG+KL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match: A0A0A0KQK7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 528 bits (1359), Expect = 3.07e-189
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKLTIIEEARKRLASQSAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match: A0A1S3BZK5 (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 8.79e-189
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match: A0A5D3D653 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00020 PE=3 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 8.79e-189
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 1.70e-186
Identity = 257/264 (97.35%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKG+KL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 3.44e-186
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTSENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 264
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CsGy5G008310 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 508.4 bits (1308), Expect = 3.4e-144
Identity = 245/261 (93.87%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CsGy5G008310 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 508.1 bits (1307), Expect = 4.4e-144
Identity = 245/261 (93.87%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of CsGy5G008310 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 505.8 bits (1301), Expect = 2.2e-143
Identity = 243/261 (93.10%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of CsGy5G008310 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-132
Identity = 227/243 (93.42%), Postives = 237/243 (97.53%), Query Frame = 0 

Query: 19  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VD KVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 79  DKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 138
           DKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
           LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
           EKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 259 QSA 262
           Q A
Sbjct: 241 QQA 243

[Close]
BLAST of CsGy5G008310 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.4e-96
Identity = 166/181 (91.71%), Postives = 174/181 (96.13%), Query Frame = 0 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKC 180

Query: 181 V 182
           V
Sbjct: 181 V 181

The following BLAST results are available for this feature:
BLAST of CsGy5G008310 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYK64.7e-14393.8740S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P492046.2e-14393.8740S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
P463006.2e-14392.8040S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
Q93VH93.1e-14293.1040S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P462994.9e-14093.1040S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1[more]
BLAST of CsGy5G008310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655007.16.34e-189100.0040S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 40S ribosomal prote... [more]
XP_008454823.11.82e-18899.62PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: ... [more]
XP_038891309.18.64e-18798.4840S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_038893437.11.23e-18698.4840S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_022146851.13.52e-18697.3540S ribosomal protein S4-3-like [Momordica charantia][more]
BLAST of CsGy5G008310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQK73.07e-189100.0040S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1[more]
A0A1S3BZK58.79e-18999.6240S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1[more]
A0A5D3D6538.79e-18999.6240S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1D0L71.70e-18697.3540S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=... [more]
A0A0A0K4K73.44e-18697.3540S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1[more]
BLAST of CsGy5G008310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58420.13.4e-14493.87Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.14.4e-14493.87Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.12.2e-14393.10Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.21.7e-13293.42Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.23.4e-9691.71Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 174..201
e-value: 7.7E-4
score: 28.8
IPR005824KOWPFAMPF00467KOWcoord: 177..210
e-value: 1.4E-6
score: 28.1
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 175..245
e-value: 1.7E-39
score: 135.5
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 3..39
e-value: 4.1E-19
score: 68.4
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 47..90
e-value: 2.7E-5
score: 23.8
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 51..112
e-value: 6.41987E-5
score: 38.3846
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 122..172
e-value: 2.3E-31
score: 109.3
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 1..117
e-value: 5.8E-61
score: 205.6
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 212..258
e-value: 5.2E-26
score: 90.1
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 95..169
e-value: 1.5E-35
score: 120.8
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 1..241
e-value: 1.1E-96
score: 319.9
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 221..264
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 2..220
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 7..238
score: 36.115631
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 2..220
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 221..264
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 8..22
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 175..229
e-value: 7.14757E-31
score: 107.216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G008310.1CsGy5G008310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding