CsGy5G007930 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA* Homology
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 6.3e-24 Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.0e-13 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10 Identity = 31/72 (43.06%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_004149248.1 (protein EARLY FLOWERING 4 [Cucumis sativus]) HSP 1 Score: 254 bits (650), Expect = 2.77e-85 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsGy5G007930 vs. NCBI nr
Match: KAA0031907.1 (protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]) HSP 1 Score: 244 bits (624), Expect = 2.56e-81 Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_008463236.2 (PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]) HSP 1 Score: 244 bits (624), Expect = 2.59e-80 Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of CsGy5G007930 vs. NCBI nr
Match: KAE8648025.1 (hypothetical protein Csa_005775 [Cucumis sativus]) HSP 1 Score: 234 bits (596), Expect = 3.32e-77 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida]) HSP 1 Score: 223 bits (569), Expect = 6.68e-73 Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A0A0KM35 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 SV=1) HSP 1 Score: 254 bits (650), Expect = 1.34e-85 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1) HSP 1 Score: 244 bits (624), Expect = 1.24e-81 Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1) HSP 1 Score: 244 bits (624), Expect = 1.26e-80 Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1) HSP 1 Score: 213 bits (543), Expect = 2.79e-69 Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1) HSP 1 Score: 213 bits (541), Expect = 5.62e-69 Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) ) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25 Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 ) HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17 Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 ) HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of CsGy5G007930 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 ) HSP 1 Score: 70.9 bits (172), Expect = 8.8e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CsGy5G007930 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 ) HSP 1 Score: 70.9 bits (172), Expect = 8.8e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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