CsGy5G007930 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G007930
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionElf4 domain-containing protein
LocationGy14Chr5: 5703704 .. 5704093 (+)
RNA-Seq ExpressionCsGy5G007930
SyntenyCsGy5G007930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

mRNA sequence

ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

Coding sequence (CDS)

ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGACGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACTGCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

Protein sequence

MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA*
Homology
BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-24
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           DP +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 100 MYSDFSSDFSTAFHNHK 117
           MYSD ++ FS+ FH  K
Sbjct: 82  MYSDLNTSFSSGFHGGK 98

BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 100 MYSDFSSDFSTAFHNHKPRTGKRGTT 126
           +YSD S +F+  F + + RT K G T
Sbjct: 94  IYSDLSLNFAKKF-DQRRRTTKDGDT 118

BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.0e-13
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0

Query: 38  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKV 97
           + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 98  VSMYSDFSSDFSTAFHNHKPRTGKRGTTN 127
             +Y D S++FS +           G  N
Sbjct: 75  AHLYVDLSNNFSKSMEASSEGDSSEGRGN 103

BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

BLAST of CsGy5G007930 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10
Identity = 31/72 (43.06%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 38  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKV 97
           + D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+ELN NI  V
Sbjct: 18  QMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRELNNNIRTV 77

Query: 98  VSMYSDFSSDFS 110
            S+Y D S  F+
Sbjct: 78  ASLYGDLSHSFA 89

BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_004149248.1 (protein EARLY FLOWERING 4 [Cucumis sativus])

HSP 1 Score: 254 bits (650), Expect = 2.77e-85
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

BLAST of CsGy5G007930 vs. NCBI nr
Match: KAA0031907.1 (protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (624), Expect = 2.56e-81
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_008463236.2 (PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo])

HSP 1 Score: 244 bits (624), Expect = 2.59e-80
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 190 KRGTTNPDA 198

BLAST of CsGy5G007930 vs. NCBI nr
Match: KAE8648025.1 (hypothetical protein Csa_005775 [Cucumis sativus])

HSP 1 Score: 234 bits (596), Expect = 3.32e-77
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0

Query: 12  MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNEN 71
           MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNEN
Sbjct: 1   MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNEN 60

Query: 72  HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA 129
           HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA
Sbjct: 61  HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA 118

BLAST of CsGy5G007930 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida])

HSP 1 Score: 223 bits (569), Expect = 6.68e-73
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTT-SDDAPHHA-FPDEYDPEVWASFDQTFRQVQSVL 60
           MADNNPRRKSKMKPSATTTTTTTTTT SDD PH   FPDEYD EVWASFDQTFRQVQSVL
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTTSDDGPHDGDFPDEYDAEVWASFDQTFRQVQSVL 60

Query: 61  DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR 120
           DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+AF NHKPR
Sbjct: 61  DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSAFSNHKPR 120

Query: 121 TGKRGTTNPDA 129
            GKRG+ NP+A
Sbjct: 121 NGKRGSNNPNA 131

BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A0A0KM35 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.34e-85
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1)

HSP 1 Score: 244 bits (624), Expect = 1.24e-81
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1)

HSP 1 Score: 244 bits (624), Expect = 1.26e-80
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189

Query: 121 KRGTTNPDA 129
           KRGTTNPDA
Sbjct: 190 KRGTTNPDA 198

BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1)

HSP 1 Score: 213 bits (543), Expect = 2.79e-69
Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MA+ N RRKSK KPSATTTTTTTTTTSDD  H  FPDE DP+VWASFDQTFRQVQSVLDR
Sbjct: 1   MAEINHRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDPQVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F+NHK R G
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNHKSRNG 120

Query: 121 KRGTTNPDA 129
           KRG++NPDA
Sbjct: 121 KRGSSNPDA 129

BLAST of CsGy5G007930 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1)

HSP 1 Score: 213 bits (541), Expect = 5.62e-69
Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0

Query: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60
           MAD NPRRKSK KPSATTTTTTTTTTSDD  H  FPDE D +VWASFDQTFRQVQSVLDR
Sbjct: 1   MADINPRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDAQVWASFDQTFRQVQSVLDR 60

Query: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120
           NR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F+N+K R G
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNNKSRNG 120

Query: 121 KRGTTNPDA 129
           KRG++NPDA
Sbjct: 121 KRGSSNPDA 129

BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           DP +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 100 MYSDFSSDFSTAFHNHK 117
           MYSD ++ FS+ FH  K
Sbjct: 82  MYSDLNTSFSSGFHGGK 98

BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 100 MYSDFSSDFSTAFHNHKPRTGKRGTT 126
           +YSD S +F+  F + + RT K G T
Sbjct: 94  IYSDLSLNFAKKF-DQRRRTTKDGDT 118

BLAST of CsGy5G007930 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0

Query: 38  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKV 97
           + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 98  VSMYSDFSSDFSTAFHNHKPRTGKRGTTN 127
             +Y D S++FS +           G  N
Sbjct: 75  AHLYVDLSNNFSKSMEASSEGDSSEGRGN 103

BLAST of CsGy5G007930 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-13
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

BLAST of CsGy5G007930 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-13
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 40  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O042116.3e-2470.13Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1[more]
O808774.8e-1652.33Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1[more]
Q8S8F55.0e-1339.33Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1[more]
Q570U61.2e-1147.14Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1[more]
Q94BS84.0e-1043.06Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_004149248.12.77e-85100.00protein EARLY FLOWERING 4 [Cucumis sativus][more]
KAA0031907.12.56e-8196.90protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY F... [more]
XP_008463236.22.59e-8096.90PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo][more]
KAE8648025.13.32e-77100.00hypothetical protein Csa_005775 [Cucumis sativus][more]
XP_038892867.16.68e-7390.84protein EARLY FLOWERING 4-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0KM351.34e-85100.00Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 S... [more]
A0A5A7SR921.24e-8196.90Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CIT11.26e-8096.90uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=... [more]
A0A6J1IH332.79e-6986.05protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 ... [more]
A0A6J1GYX85.62e-6986.05protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=... [more]
Match NameE-valueIdentityDescription
AT2G40080.14.5e-2570.13Protein of unknown function (DUF1313) [more]
AT2G29950.13.4e-1752.33ELF4-like 1 [more]
AT2G06255.13.6e-1439.33ELF4-like 3 [more]
AT1G17455.18.8e-1347.14ELF4-like 4 [more]
AT1G17455.28.8e-1347.14ELF4-like 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009741Protein EARLY FLOWERING 4 domainPFAMPF07011Elf4coord: 39..116
e-value: 1.7E-37
score: 127.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..30
NoneNo IPR availablePANTHERPTHR33469:SF5PROTEIN EARLY FLOWERING 4coord: 10..122
IPR040462Protein EARLY FLOWERING 4PANTHERPTHR33469PROTEIN ELF4-LIKE 4coord: 10..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G007930.1CsGy5G007930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0000122 negative regulation of transcription by RNA polymerase II
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0042753 positive regulation of circadian rhythm
biological_process GO:0010017 red or far-red light signaling pathway
biological_process GO:0009909 regulation of flower development
biological_process GO:0010114 response to red light
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription regulator complex
molecular_function GO:0042803 protein homodimerization activity