CsGy5G007510 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G007510
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Thioredoxin domain-containing protein
Location	Gy14Chr5: 5266877 .. 5268211 (-)
RNA-Seq Expression	CsGy5G007510
Synteny	CsGy5G007510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTCTTCGATAGGCCAACTCATTTTAAACTCACTCTTATATCCTTTTTCTTTCACAGTAGAAGAAGAATTTGCAAAATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATACAACAAGCTGGTATATATATCTCTACTTTTTCTTTAGTTTTCAAGATCAAATCCTAAATTTTGAAACTAAACACTCGTTTGACAATCTTAATTAGTTTGTTGGTCTTTGAAGTACAGTTTTATAATACCACTAAAAAAACACTTATTTTCTCTGTCAAATTCTAAAAACAAAAACCAGTATTTAAAAGGAAAATTTTAAAACATACTAAATTTTACAAAATATTTACAATATACAGCAAATTCTTTTGCTATTTTTAAAAATACCCCTATTTAAAAACTAGTATTTTCAATAATTTATGGTTTTCATTTTAAATATTTGGGTAAGAATTCAAGTATTTCCTCCAAAAATGTATAAATCATACTGTAAAAAGCATAATTTTTTAAGAAAAAATAAATTTAAAACATATAATTACCAAAGGTAACCAATATGGTCCACTTTCACATTTAAGTTAAAAATAATAAAATACATAGCACAAGCATAAAATTATAGAATTAGTAAAAGACTAAAAAATTCACATGCGGTGTTATTTTTTCAAGTATTTTATTTTTTACTATATTTTTAGTTTAATTCTTAAATTGTGCTCTTAAAAATTATTATGAAAACGAGACTGTAGCTAACAATGCACTATTGTAATTGGTAGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGGTGAGTTAAAAAGAAATTATTATTATTATTCGATCATATATATATGCTTTTGCTGATGCAATTTTTGTTAATTAAAATTGTGATTTAATTTAATTTTGTACTGTGTTTTACAGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACCATTTCCAAACATTCAGCCTATTGAAGAAAAGCAATAATAGTCAGTTCAATATAAACAATAAGAATGCTATAAAGGTTAATTATTTTAGAGATATATATATTGCCAAATAAAATGTTGTTTTCTGATATGAAACTCATATTCAACCATGTAAAAAATTCAGTATATATACTTCAGATGGATATGCTT

mRNA sequence

ATGCAATTCTTCGATAGGCCAACTCATTTTAAACTCACTCTTATATCCTTTTTCTTTCACAGTAGAAGAAGAATTTGCAAAATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATACAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACCATTTCCAAACATTCAGCCTATTGAAGAAAAGCAATAATAGTCAGTTCAATATAAACAATAAGAATGCTATAAAGGTTAATTATTTTAGAGATATATATATTGCCAAATAAAATGTTGTTTTCTGATATGAAACTCATATTCAACCATGTAAAAAATTCAGTATATATACTTCAGATGGATATGCTT

Coding sequence (CDS)

ATGCAATTCTTCGATAGGCCAACTCATTTTAAACTCACTCTTATATCCTTTTTCTTTCACAGTAGAAGAAGAATTTGCAAAATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATACAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACCATTTCCAAACATTCAGCCTATTGA

Protein sequence

MQFFDRPTHFKLTLISFFFHSRRRICKMAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY*

Homology

[Close]

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           AE G+VI CHTV +W + L K      L+VV+FTASWCGPCRF+AP L ELAKK+  NV 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLP-NVT 62

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 142
           FLKVD+DEL ++A E+ V S+P+F FLK GK++DK VGAKK  LQ TI+KH A
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.4e-34
Identity = 66/113 (58.41%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 142
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK  LQ+TI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAE G+VI  HTV +W +HL K     KL+VV+FTASWCGPC+F+A    ELAKKM   V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMP-TV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 140
            FLKVD+DEL S+A ++ V ++P+F FLK GK+VDK VGAKK  LQ TI+KH
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-32
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 141
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ  I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           +E G+V  CH V  W ++  K  +  KLVVV+FTASWCGPCRF+APIL ++AKKM  +VI
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMP-HVI 68

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 142
           FLKVD+DEL +++ E+ V ++P+F F+K+GK VD+ VGAKK  LQ TI KH+A
Sbjct: 69  FLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAA 120

[Close]

BLAST of CsGy5G007510 vs. NCBI nr
Match: KAE8648009.1 (hypothetical protein Csa_021401 [Cucumis sativus])

HSP 1 Score: 287 bits (735), Expect = 7.95e-98
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MQFFDRPTHFKLTLISFFFHSRRRICKMAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVN 60
           MQFFDRPTHFKLTLISFFFHSRRRICKMAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVN
Sbjct: 1   MQFFDRPTHFKLTLISFFFHSRRRICKMAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVN 60

Query: 61  FTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKL 120
           FTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKL
Sbjct: 61  FTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKL 120

Query: 121 VDKFVGAKKTLLQNTISKHSAY 142
           VDKFVGAKKTLLQNTISKHSAY
Sbjct: 121 VDKFVGAKKTLLQNTISKHSAY 142

[Close]

BLAST of CsGy5G007510 vs. NCBI nr
Match: XP_004149944.1 (thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 231 bits (590), Expect = 4.20e-76
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 142
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 115

[Close]

BLAST of CsGy5G007510 vs. NCBI nr
Match: XP_008464899.1 (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 228 bits (582), Expect = 6.96e-75
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114

[Close]

BLAST of CsGy5G007510 vs. NCBI nr
Match: XP_038893093.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 195 bits (496), Expect = 8.40e-62
Identity = 95/114 (83.33%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAEMGKVISCHTVSSW Q LLKA+Q NKLVVVNFTA+WCGPCR MAPI+EEL+KKMSN V
Sbjct: 1   MAEMGKVISCHTVSSWNQQLLKAKQCNKLVVVNFTATWCGPCRAMAPIVEELSKKMSN-V 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
           IFLKVDIDELMSIAKE GVSS+PSFQF+KNGK+VDKFVGAKK LL++T++KH+A
Sbjct: 61  IFLKVDIDELMSIAKELGVSSIPSFQFIKNGKVVDKFVGAKKDLLKSTVAKHAA 113

[Close]

BLAST of CsGy5G007510 vs. NCBI nr
Match: XP_038893273.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 187 bits (475), Expect = 1.51e-58
Identity = 86/113 (76.11%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNN- 87
           MA+MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WCGPCR MAP+LE+LA KM NN 
Sbjct: 1   MADMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCGPCRTMAPVLEDLASKMRNND 60

Query: 88  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 139
           V+FLKVD+DELMS+A E GV ++PSFQF KNGKLVDKFVGA+K +L +T+SKH
Sbjct: 61  VLFLKVDVDELMSVANELGVGALPSFQFFKNGKLVDKFVGARKDVLHSTVSKH 113

[Close]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL
Match: A0A0A0KLS7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 2.03e-76
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 142
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 115

[Close]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL
Match: A0A1S3CMJ1 (thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 3.37e-75
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL
Match: A0A5D3DCH1 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00270 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 9.44e-59
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           M +MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WC PCR MAP+L++LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
           I LKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL
Match: A0A1S3CMM6 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 9.44e-59
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           M +MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WC PCR MAP+L++LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
           I LKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL
Match: A0A0A0KSB1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 3.84e-58
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           M +MGKV+SCHTV SWKQ LLKA+Q NKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of CsGy5G007510 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 144.8 bits (364), Expect = 5.3e-35
Identity = 66/113 (58.41%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 142
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK  LQ+TI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of CsGy5G007510 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-33
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 29  AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 88
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 89  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 141
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ  I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CsGy5G007510 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29
Identity = 53/112 (47.32%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MA  G+VI+CHT+  W + +  A +  KL+V++FTASWC PCRF+AP+  E+AKK + NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFT-NV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 140
           +F K+D+DEL ++A+EF V ++P+F F+K G ++D+ VGA K  +   + KH
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CsGy5G007510 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-27
Identity = 53/112 (47.32%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 28  MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87
           MA  G+VI+CHTV  W + L  A +  KL+V++FTA+WC PCRF+AP+  +LAKK   +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDV 60

Query: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 140
           +F KVD+DEL ++A+EF V ++P+F F+K G++ +  VGA K  +   + KH
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

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BLAST of CsGy5G007510 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 107.5 bits (267), Expect = 9.3e-24
Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 32  GKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLK 91
           G+VIS H+ S  +     A++ ++L+++ FTA+WCGPCR+M+P+   LA + S  V+FLK
Sbjct: 270 GEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS-RVVFLK 329

Query: 92  VDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 142
           VDID+   +A  + +SSVP+F F+++GK VDK VGA K  L+  I++HS+
Sbjct: 330 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSS 378

The following BLAST results are available for this feature:

BLAST of CsGy5G007510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	1.9e-34	61.06	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	7.4e-34	58.41	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	1.8e-32	59.82	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
Q39239	3.1e-32	57.14	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
P29449	5.3e-32	56.64	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of CsGy5G007510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648009.1	7.95e-98	99.30	hypothetical protein Csa_021401 [Cucumis sativus]	[more]
XP_004149944.1	4.20e-76	99.13	thioredoxin H-type [Cucumis sativus]	[more]
XP_008464899.1	6.96e-75	98.25	PREDICTED: thioredoxin H-type-like [Cucumis melo]	[more]
XP_038893093.1	8.40e-62	83.33	thioredoxin H1-like [Benincasa hispida]	[more]
XP_038893273.1	1.51e-58	76.11	thioredoxin H1-like [Benincasa hispida]	[more]

BLAST of CsGy5G007510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLS7	2.03e-76	99.13	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490...	[more]
A0A1S3CMJ1	3.37e-75	98.25	thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1	[more]
A0A5D3DCH1	9.44e-59	74.56	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G...	[more]
A0A1S3CMM6	9.44e-59	74.56	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1	[more]
A0A0A0KSB1	3.84e-58	74.56	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500...	[more]

BLAST of CsGy5G007510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	5.3e-35	58.41	thioredoxin H-type 1	[more]
AT1G19730.1	2.2e-33	57.14	Thioredoxin superfamily protein	[more]
AT1G45145.1	1.1e-29	47.32	thioredoxin H-type 5	[more]
AT5G42980.1	3.1e-27	47.32	thioredoxin 3	[more]
AT3G17880.1	9.3e-24	45.45	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 65..74 score: 63.11 coord: 105..116 score: 32.45 coord: 57..65 score: 53.46
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 21..141 e-value: 4.8E-38 score: 131.9
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 28..140
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 28..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 41..130 e-value: 3.55419E-35 score: 115.348
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 37..137 e-value: 1.4E-28 score: 98.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..141 score: 12.111334
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 58..76
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 27..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G007510.2	CsGy5G007510.2	mRNA