CsGy5G007495 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G007495
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
LocationGy14Chr5: 5251513 .. 5252016 (+)
RNA-Seq ExpressionCsGy5G007495
SyntenyCsGy5G007495
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTCGATCAAATGCCCAACCTCGATTTTTATGTGTGGAAGGTGATGATCAGGTGGTATTTTTTGAATGACTTGTTTGTGGATGTTATTCCATTCTATAATCACATGAGAATGTCTTTTAGGGAATGTGATAACATATTTTTTTTTCAATTATTTTGAGAGCCTGTAGCGAATTCTGTGAAATTGTTAAAGGCAGAACGATCCATTGTCAGATTGTGAAGGTGAGGGGTCTGGATAGCTTTGTAATGATTGGTTTGATAGTTATGTATGGTAAATGTGGGCAGGTTGAGTGCTCAAAGTGTTGCGTTTGAAGAAATCATAGATAAAAATGTGGCTTCATGGGCTTCAATGATTGCGGGATATGTAGAAAATAGTTGTGTGGAGGAGGGTTTGGTTTTATTCAATCAGATGAGAGATGCATTGGTTGAAAGCAATCCATTTACTTTAGGAAGCATAATAAATGCGTTTACAAAATTAAGAGCTTTACATCAAGGAAAATGA

mRNA sequence

ATGGTGTTCGATCAAATGCCCAACCTCGATTTTTATGTGTGGAAGGTGATGATCAGGTGGTTGAGTGCTCAAAGTGTTGCGTTTGAAGAAATCATAGATAAAAATGTGGCTTCATGGGCTTCAATGATTGCGGGATATGTAGAAAATAGTTGTGTGGAGGAGGGTTTGGTTTTATTCAATCAGATGAGAGATGCATTGGTTGAAAGCAATCCATTTACTTTAGGAAGCATAATAAATGCGTTTACAAAATTAAGAGCTTTACATCAAGGAAAATGA

Coding sequence (CDS)

ATGGTGTTCGATCAAATGCCCAACCTCGATTTTTATGTGTGGAAGGTGATGATCAGGTGGTTGAGTGCTCAAAGTGTTGCGTTTGAAGAAATCATAGATAAAAATGTGGCTTCATGGGCTTCAATGATTGCGGGATATGTAGAAAATAGTTGTGTGGAGGAGGGTTTGGTTTTATTCAATCAGATGAGAGATGCATTGGTTGAAAGCAATCCATTTACTTTAGGAAGCATAATAAATGCGTTTACAAAATTAAGAGCTTTACATCAAGGAAAATGA

Protein sequence

MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFTKLRALHQGK*
Homology
[Close]
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 28  FEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFTKLRAL 87
           F +I  +NV  W SMIAGYV+N   EEGLVLFN+MR+  V  N +T G++I A TKL AL
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258

Query: 88  HQGK 92
           HQGK
Sbjct: 259 HQGK 262

[Close]
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 0 

Query: 2   VFDQMPNLDFYVWKVMI------RWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEG 61
           +F  MP  DF  W  MI      R ++     F+ + +KNV SW +MI GYVEN   EE 
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314

Query: 62  LVLFNQM-RDALVESNPFTLGSIINAFTKLRALHQGK 92
           L +F++M RD  V+ N  T  SI++A + L  L +G+
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351

[Close]
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 28  FEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFTKLRAL 87
           FE + DK+  +W+SM+AGYV+N   EE L+L+ + +   +E N FTL S+I A + L AL
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279

Query: 88  HQGK 92
            +GK
Sbjct: 280 IEGK 283

[Close]
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match: Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-09
Identity = 27/69 (39.13%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 23  AQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFT 82
           AQ V F+E+  +NV +W ++IAGYV++ C ++G+++F +M  + V  N  TL S+++A  
Sbjct: 259 AQKV-FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA 318

Query: 83  KLRALHQGK 92
            + ALH+G+
Sbjct: 319 HVGALHRGR 326

[Close]
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match: Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 0 

Query: 2   VFDQMPNLDFYVWKVMIRWLSAQS------VAFEEIIDKNVASWASMIAGYVENSCVEEG 61
           VFD+MP      W  M+  L + S      + F ++  +NV SW +MI  YV+N   +E 
Sbjct: 176 VFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEA 235

Query: 62  LVLFNQMRDALVESNPFTLGSIINAFTKLRALHQGK 92
             LF +M+   V+ N FT+ +++ A T+L +L  G+
Sbjct: 236 FQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR 271

[Close]
BLAST of CsGy5G007495 vs. NCBI nr
Match: KGN50601.1 (hypothetical protein Csa_021444 [Cucumis sativus])

HSP 1 Score: 187 bits (474), Expect = 1.20e-59
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN 60
          MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN
Sbjct: 1  MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN 60

Query: 61 QMRDALVESNPFTLGSIINAFTKLRALHQGK 91
          QMRDALVESNPFTLGSIINAFTKLRALHQGK
Sbjct: 61 QMRDALVESNPFTLGSIINAFTKLRALHQGK 91

[Close]
BLAST of CsGy5G007495 vs. NCBI nr
Match: XP_031742318.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis sativus])

HSP 1 Score: 127 bits (320), Expect = 7.43e-32
Identity = 75/166 (45.18%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMPN DFY WKVMIRW                                        
Sbjct: 114 MVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELR 173

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 174 EIVEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAG 233

[Close]
BLAST of CsGy5G007495 vs. NCBI nr
Match: XP_008456885.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902050.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902051.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902052.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo])

HSP 1 Score: 125 bits (315), Expect = 3.52e-31
Identity = 74/166 (44.58%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMP+ DFY WKVMIRW                                        
Sbjct: 105 MVFDQMPDPDFYAWKVMIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELR 164

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 165 EIDEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAG 224

[Close]
BLAST of CsGy5G007495 vs. NCBI nr
Match: TYK25892.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 3.82e-31
Identity = 74/166 (44.58%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMP+ DFY WKVMIRW                                        
Sbjct: 105 MVFDQMPDPDFYAWKVMIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELR 164

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 165 EIDEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAG 224

[Close]
BLAST of CsGy5G007495 vs. NCBI nr
Match: XP_038893238.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa hispida])

HSP 1 Score: 125 bits (313), Expect = 6.60e-31
Identity = 73/166 (43.98%), Postives = 81/166 (48.80%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMP+ DFY WKVMIRW                                        
Sbjct: 105 MVFDQMPDPDFYAWKVMIRWYFLNDLFVDIIPFYNRMRMSFRECDKIIFSIILKACSELR 164

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              + + SV FEEI+DKNV SW SMIAG
Sbjct: 165 EIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIESSSVVFEEIVDKNVVSWTSMIAG 224

[Close]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match: A0A0A0KSA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G190450 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 5.81e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN 60
          MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN
Sbjct: 1  MVFDQMPNLDFYVWKVMIRWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFN 60

Query: 61 QMRDALVESNPFTLGSIINAFTKLRALHQGK 91
          QMRDALVESNPFTLGSIINAFTKLRALHQGK
Sbjct: 61 QMRDALVESNPFTLGSIINAFTKLRALHQGK 91

[Close]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match: A0A0A0KLZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189930 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 9.27e-33
Identity = 75/166 (45.18%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMPN DFY WKVMIRW                                        
Sbjct: 114 MVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELR 173

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 174 EIVEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAG 233

[Close]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match: A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 1.70e-31
Identity = 74/166 (44.58%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMP+ DFY WKVMIRW                                        
Sbjct: 105 MVFDQMPDPDFYAWKVMIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELR 164

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 165 EIDEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAG 224

[Close]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match: A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 1.85e-31
Identity = 74/166 (44.58%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           MVFDQMP+ DFY WKVMIRW                                        
Sbjct: 105 MVFDQMPDPDFYAWKVMIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELR 164

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +   S  FEEI+DKNV SW SMIAG
Sbjct: 165 EIDEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAG 224

[Close]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match: A0A6J1DCB9 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018771 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 5.19e-27
Identity = 69/166 (41.57%), Postives = 74/166 (44.58%), Query Frame = 0 

Query: 1   MVFDQMPNLDFYVWKVMIRW---------------------------------------- 60
           +VFDQMP+ DFY WKVMIRW                                        
Sbjct: 104 LVFDQMPDRDFYAWKVMIRWYFLNDMFADIIPFYNSMRMSFTESDNIIFSIILKACSELR 163

Query: 61  -----------------------------------LSAQSVAFEEIIDKNVASWASMIAG 91
                                              +      FE IIDKNV SW SMIAG
Sbjct: 164 EIVEGRKVHGQIVKVGGPDSFVLTGLVDMYAKCGQIECSCAVFEGIIDKNVVSWTSMIAG 223

[Close]
BLAST of CsGy5G007495 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 28  FEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFTKLRAL 87
           F +I  +NV  W SMIAGYV+N   EEGLVLFN+MR+  V  N +T G++I A TKL AL
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258

Query: 88  HQGK 92
           HQGK
Sbjct: 259 HQGK 262

[Close]
BLAST of CsGy5G007495 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 0 

Query: 2   VFDQMPNLDFYVWKVMI------RWLSAQSVAFEEIIDKNVASWASMIAGYVENSCVEEG 61
           +F  MP  DF  W  MI      R ++     F+ + +KNV SW +MI GYVEN   EE 
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314

Query: 62  LVLFNQM-RDALVESNPFTLGSIINAFTKLRALHQGK 92
           L +F++M RD  V+ N  T  SI++A + L  L +G+
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351

[Close]
BLAST of CsGy5G007495 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 28  FEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFTKLRAL 87
           FE + DK+  +W+SM+AGYV+N   EE L+L+ + +   +E N FTL S+I A + L AL
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279

Query: 88  HQGK 92
            +GK
Sbjct: 280 IEGK 283

[Close]
BLAST of CsGy5G007495 vs. TAIR 10
Match: AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-10
Identity = 27/69 (39.13%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 23  AQSVAFEEIIDKNVASWASMIAGYVENSCVEEGLVLFNQMRDALVESNPFTLGSIINAFT 82
           AQ V F+E+  +NV +W ++IAGYV++ C ++G+++F +M  + V  N  TL S+++A  
Sbjct: 259 AQKV-FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA 318

Query: 83  KLRALHQGK 92
            + ALH+G+
Sbjct: 319 HVGALHRGR 326

[Close]
BLAST of CsGy5G007495 vs. TAIR 10
Match: AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 8.4e-10
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 0 

Query: 2   VFDQMPNLDFYVWKVMIRWLSAQS------VAFEEIIDKNVASWASMIAGYVENSCVEEG 61
           VFD+MP      W  M+  L + S      + F ++  +NV SW +MI  YV+N   +E 
Sbjct: 176 VFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEA 235

Query: 62  LVLFNQMRDALVESNPFTLGSIINAFTKLRALHQGK 92
             LF +M+   V+ N FT+ +++ A T+L +L  G+
Sbjct: 236 FQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR 271

The following BLAST results are available for this feature:
BLAST of CsGy5G007495 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZQ744.2e-1459.38Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... [more]
O647663.1e-0939.18Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop... [more]
Q9LZ193.1e-0945.31Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop... [more]
Q9SX456.9e-0939.13Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX... [more]
Q389591.2e-0833.33Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... [more]
BLAST of CsGy5G007495 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50601.11.20e-59100.00hypothetical protein Csa_021444 [Cucumis sativus][more]
XP_031742318.17.43e-3245.18pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis sa... [more]
XP_008456885.13.52e-3144.58PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial ... [more]
TYK25892.13.82e-3144.58pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_038893238.16.60e-3143.98pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa ... [more]
BLAST of CsGy5G007495 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSA85.81e-60100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G190450 PE=4 SV=1[more]
A0A0A0KLZ19.27e-3345.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189930 PE=4 SV=1[more]
A0A1S4E1F11.70e-3144.58pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ... [more]
A0A5D3DQT21.85e-3144.58Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1DCB95.19e-2741.57pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 ... [more]
BLAST of CsGy5G007495 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G03380.13.0e-1559.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G35030.12.2e-1039.18Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G04780.12.2e-1045.31Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G50270.14.9e-1039.13Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26630.18.4e-1033.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 34..82
e-value: 9.8E-9
score: 35.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 38..64
e-value: 1.0E-5
score: 23.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 35..69
score: 8.900633
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..90
e-value: 2.7E-11
score: 45.1
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 23..91
NoneNo IPR availablePANTHERPTHR24015:SF1951PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 23..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G007495.1CsGy5G007495.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding