CsGy5G007240 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G007240
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription termination factor MTERF5
LocationGy14Chr5: 4993092 .. 4994499 (+)
RNA-Seq ExpressionCsGy5G007240
SyntenyCsGy5G007240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACTGCCATTTCTACTCCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGATCTCCTACCTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAGATCACATGGATTCGAGAATCCACAGATCGCCAATTTGGTCTCGAGGCACCCTTCTATACTTCAATCCAGAGTATCCACCAATCTGAACCCTAAATTTGAGTTCCTCCAGGAAATGGGGTTCGTCGGTCCTTTACTTTCTAAGCTAATTCTATCAAACCCTTGGCTTCTTTTCAGGAGCTTAGATTCTCATTTGAAACCATCGTTTTCTTTCTGGAAGAATAATCTTGAATCGGTTGAACAAGTAACTGCTGCTATTTCTCGTTCTTCGTGGCTTCTAACTTCTGATTTTAAGGGTATCTTAAAATCTAACATTGATTTATTGGTCAGTGAAGGAGTATCTTCTAGGGCTATAGCGACATTGATTGTAGTGCAGCCTAGAACTATAATGCGAACAGTTGATAGAATGATTCAATTAGTGAAAACGGTTAAAGAATTGGGCTTTGAACCAAAAGCTCGTACGTTTGTTCATGCACTTAGAGTAAGGGGTTCAATGAGTGATTCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTGCAGCATTTAAGAAATTTCCACTTTATTTAACTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCCAAGTTGGATGCAGGAACTCTAATTACTTACCCTGTGTTATTCAAGTTGTCAGTCGACAAGCGGCTCCTACCGATGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATCGCTCGGGTGTTTGTACAAGGGGAGAGAGAATTTGTGGAGAAATATATTGTTAGGCATTTGGATGAAATCCCATATCTGATGGACATATACCGGGGCAATGTCACAGCCGAAACCAAATCTGTTGTATAGGATTGTAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGGTGTGTGTTCAAAGGGGAGAGCACTTTTGTTGCTATTAAGCCTGCCGTTTCTTCTTGAGCTTATCAAGATCTTTCTCTCTGTGTTTTTTTCAGGTGGGAGAGTTGTGATGATTTTGCATCTAAATTAAGGTAGTTTGTTAGGTAAATCCATTTGGTGTATATTTGATCATAGACATGTTAATCTTGAAATTTGAGGCTGGAGGCCTTTTTGTTTTTCCCTTCCTAATCTTCT

mRNA sequence

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACTGCCATTTCTACTCCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGATCTCCTACCTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAGATCACATGGATTCGAGAATCCACAGATCGCCAATTTGGTCTCGAGGCACCCTTCTATACTTCAATCCAGAGTATCCACCAATCTGAACCCTAAATTTGAGTTCCTCCAGGAAATGGGGTTCGTCGGTCCTTTACTTTCTAAGCTAATTCTATCAAACCCTTGGCTTCTTTTCAGGAGCTTAGATTCTCATTTGAAACCATCGTTTTCTTTCTGGAAGAATAATCTTGAATCGGTTGAACAAGTAACTGCTGCTATTTCTCGTTCTTCGTGGCTTCTAACTTCTGATTTTAAGGGTATCTTAAAATCTAACATTGATTTATTGGTCAGTGAAGGAGTATCTTCTAGGGCTATAGCGACATTGATTGTAGTGCAGCCTAGAACTATAATGCGAACAGTTGATAGAATGATTCAATTAGTGAAAACGGTTAAAGAATTGGGCTTTGAACCAAAAGCTCGTACGTTTGTTCATGCACTTAGAGTAAGGGGTTCAATGAGTGATTCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTGCAGCATTTAAGAAATTTCCACTTTATTTAACTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCCAAGTTGGATGCAGGAACTCTAATTACTTACCCTGTGTTATTCAAGTTGTCAGTCGACAAGCGGCTCCTACCGATGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATCGCTCGGGTGTTTGTACAAGGGGAGAGAGAATTTGTGGAGAAATATATTGTTAGGCATTTGGATGAAATCCCATATCTGATGGACATATACCGGGGCAATGTCACAGCCGAAACCAAATCTGTTGTATAGGATTGTAAAGTTGTGGGAGAGTTGTGATGATTTTGCATCTAAATTAAGGTAGTTTGTTAGGTAAATCCATTTGGTGTATATTTGATCATAGACATGTTAATCTTGAAATTTGAGGCTGGAGGCCTTTTTGTTTTTCCCTTCCTAATCTTCT

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACTGCCATTTCTACTCCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGATCTCCTACCTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCATTATCGGTTTCTTCAGATCACATGGATTCGAGAATCCACAGATCGCCAATTTGGTCTCGAGGCACCCTTCTATACTTCAATCCAGAGTATCCACCAATCTGAACCCTAAATTTGAGTTCCTCCAGGAAATGGGGTTCGTCGGTCCTTTACTTTCTAAGCTAATTCTATCAAACCCTTGGCTTCTTTTCAGGAGCTTAGATTCTCATTTGAAACCATCGTTTTCTTTCTGGAAGAATAATCTTGAATCGGTTGAACAAGTAACTGCTGCTATTTCTCGTTCTTCGTGGCTTCTAACTTCTGATTTTAAGGGTATCTTAAAATCTAACATTGATTTATTGGTCAGTGAAGGAGTATCTTCTAGGGCTATAGCGACATTGATTGTAGTGCAGCCTAGAACTATAATGCGAACAGTTGATAGAATGATTCAATTAGTGAAAACGGTTAAAGAATTGGGCTTTGAACCAAAAGCTCGTACGTTTGTTCATGCACTTAGAGTAAGGGGTTCAATGAGTGATTCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTGCAGCATTTAAGAAATTTCCACTTTATTTAACTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCCAAGTTGGATGCAGGAACTCTAATTACTTACCCTGTGTTATTCAAGTTGTCAGTCGACAAGCGGCTCCTACCGATGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATCGCTCGGGTGTTTGTACAAGGGGAGAGAGAATTTGTGGAGAAATATATTGTTAGGCATTTGGATGAAATCCCATATCTGATGGACATATACCGGGGCAATGTCACAGCCGAAACCAAATCTGTTGTATAG

Protein sequence

MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEKNIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSKLILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLLVSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDSIWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPVLFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDIYRGNVTAETKSVV*
Homology
[Close]
BLAST of CsGy5G007240 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.3e-09
Identity = 37/145 (25.52%), Postives = 74/145 (51.03%), Query Frame = 0 

Query: 68  IIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGF-VGPLLSKLILSNP 127
           ++ FF++ G    Q+  ++  +P ++   + T L     FL  +G     ++ K+++ NP
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 WLLFRSLDSHLKPSFSFWKNNLE-SVEQVTAAISRSSWLLTSDFKGILKSNIDLLVSEGV 187
           +L+  S+D  L+P+  F K+++  S + + + +     LL  D   ILK N D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 SSRAIATLIVVQPRTIMRTVDRMIQ 211
               IAT++   P+ ++++V   +Q
Sbjct: 237 GDSQIATMVTGYPQILIKSVKNSLQ 261

[Close]
BLAST of CsGy5G007240 vs. NCBI nr
Match: KAE8647996.1 (hypothetical protein Csa_021439 [Cucumis sativus])

HSP 1 Score: 718 bits (1854), Expect = 1.06e-260
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK
Sbjct: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL
Sbjct: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS
Sbjct: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
           IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV
Sbjct: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI
Sbjct: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGNVTAETKSVV
Sbjct: 361 YRGNVTAETKSVV 373

[Close]
BLAST of CsGy5G007240 vs. NCBI nr
Match: XP_031740942.1 (uncharacterized protein LOC116403671 [Cucumis sativus])

HSP 1 Score: 718 bits (1854), Expect = 2.42e-260
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK
Sbjct: 23  MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 82

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK
Sbjct: 83  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 142

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL
Sbjct: 143 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 202

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS
Sbjct: 203 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 262

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
           IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV
Sbjct: 263 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 322

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI
Sbjct: 323 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 382

Query: 361 YRGNVTAETKSVV 373
           YRGNVTAETKSVV
Sbjct: 383 YRGNVTAETKSVV 395

[Close]
BLAST of CsGy5G007240 vs. NCBI nr
Match: XP_008446011.1 (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo] >KAA0034174.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15745.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 545 bits (1403), Expect = 5.18e-192
Identity = 289/373 (77.48%), Postives = 314/373 (84.18%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           M K SSTFLLHFI KRFL  +ST TLPL SVST++FLTNSC LSSGSPTS GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEA+IGF +SHG ENPQIA LVSR P ILQS+VSTNL PKFEFLQE+GFVGPLLSK
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNP + +R+LDS LKPSF F K  LES EQVTAAI  S WLL SDFKGILKSNID+L
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
            SEGV SR IA LIV   RTIMR VDRMI++VKTVKELG EPKA  FVHALR+R S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WKKKINV+KSLGWSE EIF AFKK P +L CSE+KMRDVADFCFNTAKLD G++I  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           +FK SVDKRL P YKVLEVLKVKNLLKN  IA V VQ ER FV+K++VRHLDEIP LMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGNVTAETKSV+
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of CsGy5G007240 vs. NCBI nr
Match: XP_031740903.1 (transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE8647997.1 hypothetical protein Csa_021392 [Cucumis sativus])

HSP 1 Score: 544 bits (1401), Expect = 1.04e-191
Identity = 285/373 (76.41%), Postives = 315/373 (84.45%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKISSTFLLHFI KR L  IST TLPLPSVSTIQFLTNSCALSSGS TSAGRKLQFDEK
Sbjct: 1   MSKISSTFLLHFIFKRLLNTISTSTLPLPSVSTIQFLTNSCALSSGSTTSAGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEAIIGF +SHGFENPQIANLVSR PSILQSRVSTNLNPKF FLQE+GFVGPLL K
Sbjct: 61  NIQQYEAIIGFLKSHGFENPQIANLVSRRPSILQSRVSTNLNPKFGFLQEIGFVGPLLPK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNP LLFRSLDSHLKPSF F K  LES E+VT A+ R   LLT DFKG++KSN+D L
Sbjct: 121 LILSNPTLLFRSLDSHLKPSFFFLKEILESDERVTTAVCRFPRLLTYDFKGVIKSNVDFL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEG+ SR IA +I +QP TI++  DRMI++VKTVKELG EPK   FV+A+  R SMSDS
Sbjct: 181 VSEGMPSRNIANMIAMQPITILQKADRMIRVVKTVKELGIEPKGPMFVYAVLSRSSMSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WK K+NV+KSLGWSE EI  AFK++P YLTCSE+KMR+VADFCFNTAK D GT+ITYP+
Sbjct: 241 TWKNKVNVMKSLGWSENEILTAFKRYPRYLTCSEEKMREVADFCFNTAKFDPGTVITYPM 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
            F  SV+KRL P YKV+EVLKVKNLLKNKKIA + +QGER FVEK +V+HLDEIP LMDI
Sbjct: 301 FFMCSVEKRLQPRYKVIEVLKVKNLLKNKKIAWLLLQGERNFVEKCVVKHLDEIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRG V AETK VV
Sbjct: 361 YRGIVAAETKCVV 373

[Close]
BLAST of CsGy5G007240 vs. NCBI nr
Match: XP_031741756.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE8648637.1 hypothetical protein Csa_008513 [Cucumis sativus])

HSP 1 Score: 541 bits (1395), Expect = 9.19e-191
Identity = 286/375 (76.27%), Postives = 316/375 (84.27%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKI STFLLHFIHKRFL AIST TLPLPSVSTIQFLTNSCALSS SPTS GRKLQFDEK
Sbjct: 1   MSKIPSTFLLHFIHKRFLNAISTSTLPLPSVSTIQFLTNSCALSSESPTSKGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           +IQQYEA IGF +SHGFEN QIA LVSR P ILQ +V  NL PKFEFLQE+GF+GPLL K
Sbjct: 61  HIQQYEATIGFLKSHGFENSQIAKLVSRKPQILQCKVPNNLQPKFEFLQEIGFIGPLLPK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LI SNP++L RSLDSHLKPSF F K  L S EQVT AISRS+ LLT DFKGILK N+D L
Sbjct: 121 LIASNPFILLRSLDSHLKPSFFFLKEILGSDEQVTVAISRSTRLLTFDFKGILKPNVDFL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEGV SR IA L  +QP  +M+ VDRMI  VK VKE+GFEPKAR FV+A+  R S+SDS
Sbjct: 181 VSEGVPSRNIAKLFALQPLALMKKVDRMINAVKVVKEIGFEPKARMFVYAVLTRLSLSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WKKKI++LKSLGWSE EIF AFKK+PL++ CSE+KMRDVADFC NT+KLD GTLITYPV
Sbjct: 241 NWKKKIDILKSLGWSENEIFTAFKKYPLFIGCSEEKMRDVADFCLNTSKLDPGTLITYPV 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
            FK SVDK+L P YKV+EVLKVKNLLKNKKIA +FV+GEREFVEKY+V+HL+EIP LMDI
Sbjct: 301 FFKSSVDKKLRPRYKVIEVLKVKNLLKNKKIASLFVKGEREFVEKYVVKHLNEIPNLMDI 360

Query: 361 YRGNVTAE--TKSVV 373
           YRGNV AE  TKSVV
Sbjct: 361 YRGNVEAEAETKSVV 375

[Close]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 2.51e-192
Identity = 289/373 (77.48%), Postives = 314/373 (84.18%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           M K SSTFLLHFI KRFL  +ST TLPL SVST++FLTNSC LSSGSPTS GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEA+IGF +SHG ENPQIA LVSR P ILQS+VSTNL PKFEFLQE+GFVGPLLSK
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNP + +R+LDS LKPSF F K  LES EQVTAAI  S WLL SDFKGILKSNID+L
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
            SEGV SR IA LIV   RTIMR VDRMI++VKTVKELG EPKA  FVHALR+R S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WKKKINV+KSLGWSE EIF AFKK P +L CSE+KMRDVADFCFNTAKLD G++I  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           +FK SVDKRL P YKVLEVLKVKNLLKN  IA V VQ ER FV+K++VRHLDEIP LMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGNVTAETKSV+
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match: A0A1S3BEQ3 (uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=3 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 2.51e-192
Identity = 289/373 (77.48%), Postives = 314/373 (84.18%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           M K SSTFLLHFI KRFL  +ST TLPL SVST++FLTNSC LSSGSPTS GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           NIQQYEA+IGF +SHG ENPQIA LVSR P ILQS+VSTNL PKFEFLQE+GFVGPLLSK
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LILSNP + +R+LDS LKPSF F K  LES EQVTAAI  S WLL SDFKGILKSNID+L
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
            SEGV SR IA LIV   RTIMR VDRMI++VKTVKELG EPKA  FVHALR+R S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WKKKINV+KSLGWSE EIF AFKK P +L CSE+KMRDVADFCFNTAKLD G++I  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           +FK SVDKRL P YKVLEVLKVKNLLKN  IA V VQ ER FV+K++VRHLDEIP LMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGNVTAETKSV+
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match: A0A5A7SXE1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001220 PE=3 SV=1)

HSP 1 Score: 538 bits (1385), Expect = 1.37e-189
Identity = 281/373 (75.34%), Postives = 316/373 (84.72%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKISS+FLLHF H RFL  I T TLPL SVSTIQFLTNSC LSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           N QQY A+I F +SHGFENPQIA LVSR PSILQSRVS NL PKFEFLQE+GFVGPLL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LI+S+P +L +SLDS LKPSF   K  L S E+VTAAI R+SWLLT DFKG++KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEGV SR IA +I   PRTIM+ VD+MIQ+VK VKELG EPKA  FVHALRVR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WK+KINV+KSLGWSE+EI  AFK++P YLTCSE+KMRDVADFCFNTAKLD GTLI+YPV
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           LFKLS DKR+ P YKVLEVLKVK+LL+N KIARV  QGEREFV+ Y+V++LD+IP LMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGN+ AETKSV+
Sbjct: 361 YRGNIAAETKSVL 373

[Close]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match: A0A5D3CX09 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002920 PE=3 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 2.27e-188
Identity = 280/373 (75.07%), Postives = 315/373 (84.45%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MSKISS+FLLHF H RFL  I T TLPL SVSTIQFLTNSC LSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           N QQY A+I F +SHGFEN QIA LVSR PSILQSRVS NL PKFEFLQE+GFVGPLL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LI+S+P +L +SLDS LKPSF   K  L S E+VTAAI R+SWLLT DFKG++KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEGV SR IA +I   PRTIM+ VD+MIQ+VK VKELG EPKA  FVHALRVR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            WK+KINV+KSLGWSE+EI  AFK++P YLTCSE+KMRDVADFCFNTAKLD GTLI+YPV
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
           LFKLS DKR+ P YKVLEVLKVK+LL+N KIARV  QGEREFV+ Y+V++LD+IP LMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVTAETKSVV 373
           YRGN+ AETKSV+
Sbjct: 361 YRGNIAAETKSVL 373

[Close]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match: A0A5A7SSP1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003130 PE=3 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 1.52e-186
Identity = 282/372 (75.81%), Postives = 312/372 (83.87%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTSAGRKLQFDEK 60
           MS++SS+FLLHFI  RFL  I T TLP  SVSTIQFL NSC LSS SP SA RKLQFDE+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  NIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLSK 120
           +IQ+YEA IGF +SHGF+N QIA LVS+HPSILQS+VSTNL PKFEFLQE+G VGPLL K
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDLL 180
           LI SNP++L RSLDSHLKPSF F K  LES  QVTAAI RS+ LLT DFKGILK N+D+L
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 VSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDS 240
           VSEG+ SR IA +I +QP  IM+ VDRMIQ VKTVKELG EPKAR FV+A+ +R S+SDS
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 IWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPV 300
            W  KINVLKSLGWSEKEIFAAFKK P YL CSEKKMRDVADFCFNTAKLD GT+I+YPV
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 LFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMDI 360
            FK SVDKRL P YKVLEVLKVKNLLKNKKIA V +QGE+ FVEKY+V+HLDEIP LMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNVTAETKSV 372
           YRGNV AETKSV
Sbjct: 361 YRGNVEAETKSV 372

[Close]
BLAST of CsGy5G007240 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-47
Identity = 109/333 (32.73%), Postives = 181/333 (54.35%), Query Frame = 0 

Query: 33  TIQFLTNSCALSSGSPTSAGRKLQFDEKNIQQYEAIIGFFRSHGFENPQIANLVSRHPSI 92
           T+ +L +SC LS  S T A RKL  D    ++   ++   R HGF   QI++LV + P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSRVSTNLNPKFEFLQEMGFVGPLLSKLILSNPWLLFRSLDSHLKPSFSFWKNNLESVE 152
           L +   + L PK  F   +G    LL++ + S+P +L RSL + L PS++F K+ L+S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QVTAAISRSSWLLTSDFKGILKSNIDLLVSEGVSSRAIATLIVVQPRTIMRTVDRMIQLV 212
           ++ AA+ R++W+   D    L  NI+ +   GV  + I  L+   P  +M+       + 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGFEPKARTFVHALR-VRGSMSDSIWKKKINVLKSLGWSEKEIFAAFKKFPLYLT 272
           K  +E+GF P+  TFV A+  + G  + SIW K   V +  GWSE +I  AFKK P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEKKMRDVADFCFNTAKLDAGTLITYPVLFKLSVDKRLLPMYKVLEVLKVKNLLKNK-K 332
            SE+K+    ++  N   +   ++   PV+   S++KR++P   V +VL    L+K    
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IARVFVQGEREFVEKYIVRHLDEIPYLMDIYRG 364
           +  + V  E+ F+EK ++++ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CsGy5G007240 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-35
Identity = 90/334 (26.95%), Postives = 166/334 (49.70%), Query Frame = 0 

Query: 33  TIQFLTNSCALSSGSPTSAGRKLQFDEKNIQQYEAIIGFFRSHGFENPQIANLVSRHPSI 92
           T+ +L +SC LS  S  S  R ++    + ++ ++++  F+ HGF N QI +++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSRVSTNLNPKFEFLQEMGFVGPLLSKLILSNPWLLFRSLDSHLKPSFSFWKNNLESVE 152
           L       ++PK  F   +GF     +K+I S+P +L  SL   L P +   K+ L   E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 QVTAAISRSSWLLTSDFKGILKSNIDLLVSEGVSSRAIATLIVVQPRTIMRTVDRMIQLV 212
            V   + R     +      +   + +    GV  ++I  L+   P T      R  +++
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KTVKELGFEPKARTFVHALRVRGSMSDSIWKKKINVLKSLGWSEKEIFAAFKKFPLYLTC 272
             V   GF+PK   FVHA+      S+S  ++K  + +  GWS+++  AA  +FP  +T 
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEKKMRDVADFCFNTAKLDAGTLITYPVLFKLSVDKRLLPMYKVLEVLKVKNLLKNKKI- 332
           S++K+    ++  N   L A  ++  PV+  LS++KR+ P  +V+ +L  K L+K + I 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 -ARVFVQGEREFVEKYIVRHLDEIPYLMDIYRGN 365
              +      EF++K+++++ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of CsGy5G007240 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-30
Identity = 90/302 (29.80%), Postives = 151/302 (50.00%), Query Frame = 0 

Query: 60  KNIQQYEAIIGFFRSHGFENPQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLS 119
           K+++Q  ++I   +S+ F + QI   +  HP ++   V   L PK  F +++GF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KLILSNPWLLFRSLDSHLKPSFSFWKNNL-ESVEQVTAAISRSSWLLTS-DFKGILKSNI 179
           K +  N  ++  SL   L P+    K+ +    E +   +SR  WLL S D    L  NI
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DLLVSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSM 239
             L + G+    +A+L+  QPR    + +++   V    +LGF   +R  VHA+    S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 SDSIWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLIT 299
           S+  + +K+ +  + G+SE EI    ++ P  + CSE K+    +F      L+   L  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPVLFKLSVDKRLLPMYKVLEVLKVKNLL-----KNKKIARVFVQGEREFVEKYIVRHLD 355
            P +   +++KR++P  KVL++L+ K LL     K K +  +    E  F+EKY+VR  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]
BLAST of CsGy5G007240 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.6e-28
Identity = 91/374 (24.33%), Postives = 183/374 (48.93%), Query Frame = 0 

Query: 33  TIQFLTNSCALSSGSPTSAGRKLQFDEKNIQQYEAIIGFFRSHGFENPQIANLVSRHPSI 92
           T+ +L +S  L++    S  RK+ F++KN    ++++    SHGF   QI+ ++  +P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVSTNLNPKFEFLQEMGFVGPLLSKLILSNPWLLFRSLDSHLKPSFSFWKNNLESVE 152
           L +    +L PK +FLQ  G     +++++ S P +L +     +   + F K+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTL---- 173

Query: 153 QVTAAISRSSWLLTSDFKGILKS---NIDLLVSEGVSSRAIATLIVVQPRTIMRTVDRMI 212
                 S++  L  S  +G L++   N+ +L   G+  + + +L++   + +    ++  
Sbjct: 174 --LEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFE 233

Query: 213 QLVKTVKELGFEPKARTFVHALRVRGSMSDSIWKKKINVLKSLGWSEKEIFAAFKKFPLY 272
           + +K V E+GF+P    FV AL+V   M++   ++K+++ KSLG+   +++++FKK+P+ 
Sbjct: 234 ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPIS 293

Query: 273 LTCSEKKMRD-----------------------------------VADFCFNTAKLDAGT 332
           L  SEKKM D                                     +F           
Sbjct: 294 LRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKA 353

Query: 333 LITYPVLFKLSVDKRLLPMYKVLEVLKVKNLLKNK--KIARVFVQGEREFVEKYIVRHLD 365
           +++ P +F  S++KR++P   V++ L  K L++N+   I+ V +  ++ F+ +Y+  H+D
Sbjct: 354 VVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVD 413

[Close]
BLAST of CsGy5G007240 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.6e-28
Identity = 91/374 (24.33%), Postives = 183/374 (48.93%), Query Frame = 0 

Query: 33  TIQFLTNSCALSSGSPTSAGRKLQFDEKNIQQYEAIIGFFRSHGFENPQIANLVSRHPSI 92
           T+ +L +S  L++    S  RK+ F++KN    ++++    SHGF   QI+ ++  +P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVSTNLNPKFEFLQEMGFVGPLLSKLILSNPWLLFRSLDSHLKPSFSFWKNNLESVE 152
           L +    +L PK +FLQ  G     +++++ S P +L +     +   + F K+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTL---- 173

Query: 153 QVTAAISRSSWLLTSDFKGILKS---NIDLLVSEGVSSRAIATLIVVQPRTIMRTVDRMI 212
                 S++  L  S  +G L++   N+ +L   G+  + + +L++   + +    ++  
Sbjct: 174 --LEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFE 233

Query: 213 QLVKTVKELGFEPKARTFVHALRVRGSMSDSIWKKKINVLKSLGWSEKEIFAAFKKFPLY 272
           + +K V E+GF+P    FV AL+V   M++   ++K+++ KSLG+   +++++FKK+P+ 
Sbjct: 234 ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPIS 293

Query: 273 LTCSEKKMRD-----------------------------------VADFCFNTAKLDAGT 332
           L  SEKKM D                                     +F           
Sbjct: 294 LRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKA 353

Query: 333 LITYPVLFKLSVDKRLLPMYKVLEVLKVKNLLKNK--KIARVFVQGEREFVEKYIVRHLD 365
           +++ P +F  S++KR++P   V++ L  K L++N+   I+ V +  ++ F+ +Y+  H+D
Sbjct: 354 VVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVD 413

The following BLAST results are available for this feature:
BLAST of CsGy5G007240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL64.3e-0925.52Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
BLAST of CsGy5G007240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647996.11.06e-260100.00hypothetical protein Csa_021439 [Cucumis sativus][more]
XP_031740942.12.42e-260100.00uncharacterized protein LOC116403671 [Cucumis sativus][more]
XP_008446011.15.18e-19277.48PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo] >KAA0034174.1 tra... [more]
XP_031740903.11.04e-19176.41transcription termination factor MTERF5, chloroplastic [Cucumis sativus] >KAE864... [more]
XP_031741756.19.19e-19176.27transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KAE864... [more]
BLAST of CsGy5G007240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWA22.51e-19277.48Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BEQ32.51e-19277.48uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=... [more]
A0A5A7SXE11.37e-18975.34Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CX092.27e-18875.07Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7SSP11.52e-18675.81Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of CsGy5G007240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G07900.11.4e-4732.73Mitochondrial transcription termination factor family protein [more]
AT1G21150.11.2e-3526.95Mitochondrial transcription termination factor family protein [more]
AT5G64950.11.2e-3029.80Mitochondrial transcription termination factor family protein [more]
AT1G61970.15.6e-2824.33Mitochondrial transcription termination factor family protein [more]
AT1G61970.25.6e-2824.33Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 191..221
e-value: 140.0
score: 10.6
coord: 225..255
e-value: 510.0
score: 6.2
coord: 293..323
e-value: 12.0
score: 14.8
coord: 260..291
e-value: 250.0
score: 8.6
coord: 155..186
e-value: 130.0
score: 10.7
coord: 83..114
e-value: 5.9E-5
score: 32.5
coord: 119..151
e-value: 4.2
score: 16.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 70..278
e-value: 1.2E-28
score: 100.0
coord: 238..342
e-value: 7.3E-12
score: 44.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 23..365
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 45..150
e-value: 5.9E-21
score: 76.8
coord: 151..354
e-value: 2.7E-34
score: 120.5
NoneNo IPR availablePANTHERPTHR13068:SF31TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKEcoord: 23..365

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G007240.2CsGy5G007240.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding