CsGy5G006175 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G006175
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	(thale cress) hypothetical protein
Location	Gy14Chr5: 4119699 .. 4120102 (+)
RNA-Seq Expression	CsGy5G006175
Synteny	CsGy5G006175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGATTAGTAATCAGATCTAAGTTCAATTCTTCACTGTACTGCTGTTTGTGACTTTGTGTATGTAAATTCTGTACTATGAGTTTAAACTTCAATACTCTATGGGTGAATCATTTTTCCAGTTATATTCTCTGTCCTACAAGTTTTTGTGCATTCGATCAAATAGACTGACCTTCAAAGTTCGCTGCCATGAT

mRNA sequence

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGATTAGTAATCAGATCTAAGTTCAATTCTTCACTGTACTGCTGTTTGTGACTTTGTGTATGTAAATTCTGTACTATGAGTTTAAACTTCAATACTCTATGGGTGAATCATTTTTCCAGTTATATTCTCTGTCCTACAAGTTTTTGTGCATTCGATCAAATAGACTGACCTTCAAAGTTCGCTGCCATGAT

Coding sequence (CDS)

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGA

Protein sequence

MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQPVFKPENTTNV*

Homology

[Close]

BLAST of CsGy5G006175 vs. NCBI nr
Match: XP_004143612.1 (uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical protein Csa_000697 [Cucumis sativus])

HSP 1 Score: 145 bits (366), Expect = 8.73e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of CsGy5G006175 vs. NCBI nr
Match: XP_008445862.1 (PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 uncharacterized protein E6C27_scaffold65G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 143 bits (360), Expect = 7.19e-43
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of CsGy5G006175 vs. NCBI nr
Match: XP_038891972.1 (uncharacterized protein LOC120081297 [Benincasa hispida])

HSP 1 Score: 140 bits (353), Expect = 8.42e-42
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKP+N+TNV
Sbjct: 61 PVFKPDNSTNV 71

[Close]

BLAST of CsGy5G006175 vs. NCBI nr
Match: XP_022999592.1 (uncharacterized protein LOC111493917 [Cucurbita maxima])

HSP 1 Score: 122 bits (305), Expect = 1.79e-34
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S  Q
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PIFKPDNSINV 71

[Close]

BLAST of CsGy5G006175 vs. NCBI nr
Match: XP_022988565.1 (uncharacterized protein LOC111485766 [Cucurbita maxima])

HSP 1 Score: 118 bits (295), Expect = 5.99e-33
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGS  AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSRLAHPPPPPE 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PLFKPDNSANV 71

[Close]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL
Match: A0A0A0KRY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 4.23e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL
Match: A0A5A7SXY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00410 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 3.48e-43
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL
Match: A0A1S3BED6 (uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 3.48e-43
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTNV 71
          PVFKPENTTNV
Sbjct: 61 PVFKPENTTNV 71

[Close]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL
Match: A0A6J1KB93 (uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 8.64e-35
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S  Q
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PIFKPDNSINV 71

[Close]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL
Match: A0A6J1JJX6 (uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 2.90e-33
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGS  AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSRLAHPPPPPE 60

Query: 61 PVFKPENTTNV 71
          P+FKP+N+ NV
Sbjct: 61 PLFKPDNSANV 71

[Close]

BLAST of CsGy5G006175 vs. TAIR 10
Match: AT1G31335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLG+++GR++IRTN Q++G P PPPG+ AA SP  L 
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGKSRGRREIRTNPQVYGAPAPPPGAIAASSP-PLS 60

Query: 61 PVFKPENTTNV 72
          P  KP+N+ NV
Sbjct: 61 PHAKPDNSHNV 70

The following BLAST results are available for this feature:

BLAST of CsGy5G006175 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G006175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143612.1	8.73e-44	100.00	uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical ...	[more]
XP_008445862.1	7.19e-43	98.59	PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 unc...	[more]
XP_038891972.1	8.42e-42	95.77	uncharacterized protein LOC120081297 [Benincasa hispida]	[more]
XP_022999592.1	1.79e-34	83.10	uncharacterized protein LOC111493917 [Cucurbita maxima]	[more]
XP_022988565.1	5.99e-33	77.46	uncharacterized protein LOC111485766 [Cucurbita maxima]	[more]

BLAST of CsGy5G006175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRY6	4.23e-44	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1	[more]
A0A5A7SXY6	3.48e-43	98.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BED6	3.48e-43	98.59	uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=...	[more]
A0A6J1KB93	8.64e-35	83.10	uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917...	[more]
A0A6J1JJX6	2.90e-33	77.46	uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766...	[more]

BLAST of CsGy5G006175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31335.1	1.2e-22	70.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..71
None	No IPR available	PANTHER	PTHR33727	OS07G0446900 PROTEIN	coord: 1..71
None	No IPR available	PANTHER	PTHR33727:SF17	BNAANNG31340D PROTEIN	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G006175.1	CsGy5G006175.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane