CsGy5G005120 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G005120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	SWR1 complex subunit 2
Location	Gy14Chr5: 3278455 .. 3283772 (+)
RNA-Seq Expression	CsGy5G005120
Synteny	CsGy5G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTTTATGCGACCTAGAGGTGCACAAAGGGGCTTGAGGTGGTGCATTTCCGAATCCGATCGACCAAAATTTCCCGCCTTTCCATAACCTTACAACGGATCGATTTAAATTATCGTCGCTACCCGATTCGAGTTCCAGCCACCGGAGAGTTATCGTAATTCGCTCTCTAATTACGGTCATCGGTGGCGGGTTGTGATTTCTCCAAGTCTTATACTTCATTTTCCAGCGTTATTTTTTGGGTTTCTTTTTCTTTTTTCAGTCATGGATTCGTCCAAAGAAGAAGATGTTCCCGTTTTTCTTGATCGCTCTTCTCGGATGACTAGAGGGAAGAGGTACCGGACTACTTCCCTTGGTTTTCTTCTCTTGGGAGTGGGTTTTGTTGTAAATTGGCATGAACTGATGGAAGATGTTTCAAATTGTATGTACTTATGAGTTGGGGTATTTTTATTTGTTATAGGATGACCAAGTTGCTTGATGAGGAAGCTGAGGAAGACGAGTTGTTTTGGAATCAGGATGCTCTCAGAGAGGTATGTTTAAAGAAATGTACTCTTTTTTTTTTTTTTTTTCTCTAGGAACGATATGAAGTTATAGTCGCTCTTTTAGCTCTTCAGTGGTTAATAGTAAAATTGCTCTTCAATGGTTATGCGCGCGATTAATGTTCAATCTTGAAGATTTAACTGAAATCGATGGTGTGCACATCCACTTAGATTCGGTTCCACAGTTGGTTTTCGCTTATGAAGTCGTGGTCTGGATGGCCTCTGTTAGATTGATGCAATGTGTCCACCCAATTATGGGGCTTGAGTTTTGACTTAGTGAAATATCCTTTCTGAACTTGTCCATCTTCAAAATGCTTCTCAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGTTGATGAATTTGATAGTGATTTCAATGAAGATGTAAGTTATGTTTCAGTTCCCATTCACAGCTTATTCTGTTAGACATAAATTTTTTTCATAACATGACTACTTTTTATGGACAGGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGGTTTTCTCTTCTCTGAAGTGCTTGGATGTTGGTTTAGATATATTTCAACTTTCTGTTTTAAAGTTGAGTTTTCTTCCAGACCACAAATGAAAAAGCGATTAATATTTCCTGGAAAGACTTCTAAGAACAAGAATAAAAAAAGAGCTGTTTCCAAAGTTGAAAAACCTTCCAAAGATGAAGCATCAACTGATCAGTCTACACCTCCTGAACATCATGATACACCGGATGATACCGAAGTTGAAAGAACTGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGAGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGGTGAGTCCTGAATACTCGAGACATTTAATTTGTAGGACTAAGATAAAACCATTAGATTAGTTTGAGTTTTTCTCGAAGGCAGTTTCTTGATTGAATAGAGTGATGCGGTGCTATGATGAAGTGGAAACTTCTGTTTTAGTTCGTATATCCTTCAACTACTTGAAAAATGTTGCCATCCTACGAATTTTTTACTCATCTATTGTGCCACATCAAAACATTTGTTTCAACCTACAGATCCATTATCTGTTTTAGGGACAAGATGATTTTAAAAAAAAAACTGCAGAAAGAAATGAAAGCAAAAAATATAAAACAAAATCGTCTGATTTCTAATTAGTTTGTTATGGAATAATTTTGAATTTTATGGCACCCAAAATTAGTTCTCCATTTGTTGGGTTTTAGTGGTGCTTGAGTATATAAACTAAATAACGAACTTTTTTGTTTTTGGGTTAAGTAAACATTCTCACAAGAAAGTTACTGGACTAGTTTACGCTTTACTATTTTGATTTATACACTTCGGGTCCTATCTATGGTTTTGAACCGATGCCCTTCTTACCAAGGGAATATCTTTTCTTAGGAGATAAGACAAATGGCGCTGCATTCAGAAGAGTAAGAAATCAGTACGGTTAAAAATACATCCACCCTAAGACAAAGGAGCTTACAAAAAGGCCTCCAATTTTGCTAATTAAAAAAAACCTCAAAATTCAATAAGTATTAAAGGGTGTGCACCATGTAGAAGTAAGAAATCTAGCATCTAGCTTTTCAGATGTCTTCTAATTGTTTTTTTTTTTTCCTTGGAGACGCTTTACTTTCCTCTATTCCAAATCTTCTATATGCAAAGCCTTAAATCCATATCAAATGGATTCATGTTCTATTTATGCGGTTTGAATTAATAATTCCACATTTTTTCCAGCTTTCTTGAGAAGTTTCTTTCTGCTTCTGTTTCTGCAATGTTCAGTATTGTTTTTGTATTAGCCATCAAATTGTTTTCTCAAAATGATTCTTTTTAGTATTATATATGAGTGAGACTATCCTTTCTTGTCCACCAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAAATGAGTCAGGAAGAAATGCTTCTTGAAGCAGCTCAAACAGGTGAAACTGATGGTTAATGTATGTTGTTGTAAGTTGCAACACTAGGTGGATACTTGAAGGAATCTTCTCATTTTCTCTTGAATTATTTCAACCTTCCATATCTAAGAAATCATGAACTTGAGGAACTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCCCGAATACAATACTTGTCAAGAAATGGTACCATCTAAAGTGTGATTCAAAATTGTTTTCTTTCAGAAAAGAACTTCCCCATGTTTGGAACTAAGTTATATTGGTGTATTTTGTTGCAGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATGTAATTAATTACTTATATATAATCATCCACCGACTACACCCTATATTATTTCGAATGAAGATTTTTATTGAATTAATAGAAAGGGATTAATGCTCAAAGACAAACTTCAAAAAGGAGGTAAAAGGAAAATAAAAAAATGTGATTATTGAAAATATAGGGGAAATAAAAGGCAATAATTAATGAAAGATAAGAACTTCATAACCAATTTCTTGCAAATAGAAGTAAGAATAATTTAGAAAAAGAACACCATGAGAAGCTTTACATCTAGTCATCTTGAAATGATTGTTCCAATGCATCTAAAAGTTAAAAAGAAAGAGAATATGGATCTTGTCCCCTTCCTTTGATTTCTCACTTTCGGTAACTTCTCAAATTTTCAATGAAGAGTAGACTTCCAATGAGAAACATTGTTCTTCCCCCTTTTCTAAATTCTAAATATGTCAAGTTAGAAACAAATGGGTCAGATTTAGTTCTGAGATCTAATGTCCCTTGGGATGTCCCTGTAAGATATCAAACTCATTCCATTAGTTCTTTAGTTTTTATCTTCCCCTTTCTTTGTATTTGAAGAATATGTAGGTGCTCATCTTACCTTGTTCTGTATTCTGTTATGTATACAATGATTCATTTCTCATTTCTTATCCCAGTAAAAGAAAATAAAAAACATGGAGAGAATCTAGTATACTATTTTGCACTATACGTTTTTTTTAAGTTTATTTAAAGTTTAGAACCTAAATATATTTTTTTCCCTTTTTCTTTCTAGATCCAGAGAAAGCTGTGTGTGTGATCACAGGTTTGCCTGCAAAGTAAGATCTCATTGTTATTCGTTTCATAGTAGCTTGACAGCCTAGCTCAGTTGTATGCAATTGAAAGGCAACGTAGTCCAATTCCTTGGAATTTACTTATGGCAACTGCTAAAGATCAATCCTGTGTACCAGATAGATCAGAATAGATTTTATCATTGTTGTTTTAAGTAGTAAAGTGCATGAAAAGGTGCAATCCTCGGAGCTTTGAACACAGGTTTAATAAATGCTTTTTATGCTGAAGGTATCGTGACCCGAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGGTATAGTTCTTCTTGCTTGCTTTTGGGTTTTGATTTATTCATTATGTTGTATTTTAGTTTGTATGCTTTTCAATTCACTTCATTTTCTTTGAGTTTCCTTATTTCTGCATTAAAATAGTTTCTTCATGGTATTACTTGTCAATAATTATATTGTGTATAAACAAGACAGGAAAATGTTAGGTGGAAGGGGTGATGATAAAAGTTCAGAAAAAAATCAATTATTTCATTTTCGCCGAGGACATGGACATATTAGCTTTCTGATTCTCCATTCTCGTGTTGCTGGGATAGTCAAACAATTTAAAAGTTGATGTGAATTAGGGTCCAGGAAACCTAGCCTTCATTAGAGGAGGTTTTCGCTTTGAGAATAAGGCTAGTTTATGAAGATTACTACTTAAGTATATAAACCTGTGACCCTCTAACTTACTAATAAATATAATTTGACTAACAGATCAAACCAAGTTACAAGTAATTTACAACCATGACGAACAGATCAAATCAAGTCTAGCCCTCATTTTATTTTATCCTTCCATGAATCAAATATCTCACTAATTGCTGATGTGATGCAGTTTTGCGGATGATAGTACGGTAGCCAAGGAAATGGACATGGGAAAATTATTTGCTTCACTTTCTGGTAATGGATTCTCAGCGAGGCGGAAGAGATCAGCACCTCAAAATAAAAATGAAATGTCCTACTTGCGCCACTTTTCTCGTTTTCGCCAAATTCCAGTCTTCGACTCTGATGTTTCTGATTAGTTTTTCAAGGTACTATATTAAATTCCTGTATGCCCGAGCTTTAATGCATATTCTGCCATTTCACGTTCATCAACTGTTATCATTATTGTTTTGAATAACCACAGTTGTTCCTGACGGTACGGGAAGGGAGAGAATACAGCATTTTGCTTTCGACAGGGGAATAAGCATATTCTCGAAGACTTTGACTTAGGTTACCTTAGAAACCATAGAACCGAATTTTCTTACCCCACAGGTTCCATGTCAAGAGAATTTCAGAACCTAATGCCTAAGGTTTTAAGGGTCATTTTGGGGGTGCGGTTTGTGGTCTTAGCAGTTCCTACAACAATTCACCTTACTGTCTTCGTCTAGTTTTAGTTTTCGACTCATGTTCTGCTGAGTGCTACCATTACTAGACAAATTCCTATTTTACGTACTTGGCCATCTCTTGGAAGATATGTTCTTGACAAAGTTTCAGTTATGTTCTCAACTTTACAACTGATAGTTTCGGGTCAAATTGACCACAAGCATTCTTGAAGAGAGATTGTTCTTTTAATACTATATAAGCGTTTTTGTTTGGAT

mRNA sequence

GTTTGTTTATGCGACCTAGAGGTGCACAAAGGGGCTTGAGGTGGTGCATTTCCGAATCCGATCGACCAAAATTTCCCGCCTTTCCATAACCTTACAACGGATCGATTTAAATTATCGTCGCTACCCGATTCGAGTTCCAGCCACCGGAGAGTTATCGTAATTCGCTCTCTAATTACGGTCATCGGTGGCGGGTTGTGATTTCTCCAAGTCTTATACTTCATTTTCCAGCGTTATTTTTTGGGTTTCTTTTTCTTTTTTCAGTCATGGATTCGTCCAAAGAAGAAGATGTTCCCGTTTTTCTTGATCGCTCTTCTCGGATGACTAGAGGGAAGAGGATGACCAAGTTGCTTGATGAGGAAGCTGAGGAAGACGAGTTGTTTTGGAATCAGGATGCTCTCAGAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGTTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGACCACAAATGAAAAAGCGATTAATATTTCCTGGAAAGACTTCTAAGAACAAGAATAAAAAAAGAGCTGTTTCCAAAGTTGAAAAACCTTCCAAAGATGAAGCATCAACTGATCAGTCTACACCTCCTGAACATCATGATACACCGGATGATACCGAAGTTGAAAGAACTGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGAGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAAATGAGTCAGGAAGAAATGCTTCTTGAAGCAGCTCAAACAGAAATCATGAACTTGAGGAACTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCCCGAATACAATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATATCCAGAGAAAGCTGTGTGTGTGATCACAGGTTTGCCTGCAAAGTATCGTGACCCGAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTTTTGCGGATGATAGTACGGTAGCCAAGGAAATGGACATGGGAAAATTATTTGCTTCACTTTCTGGTAATGGATTCTCAGCGAGGCGGAAGAGATCAGCACCTCAAAATAAAAATGAAATGTCCTACTTGCGCCACTTTTCTCGTTTTCGCCAAATTCCAGTCTTCGACTCTGATGTTTCTGATTAGTTTTTCAAGTTGTTCCTGACGGTACGGGAAGGGAGAGAATACAGCATTTTGCTTTCGACAGGGGAATAAGCATATTCTCGAAGACTTTGACTTAGGTTACCTTAGAAACCATAGAACCGAATTTTCTTACCCCACAGGTTCCATGTCAAGAGAATTTCAGAACCTAATGCCTAAGGTTTTAAGGGTCATTTTGGGGGTGCGGTTTGTGGTCTTAGCAGTTCCTACAACAATTCACCTTACTGTCTTCGTCTAGTTTTAGTTTTCGACTCATGTTCTGCTGAGTGCTACCATTACTAGACAAATTCCTATTTTACGTACTTGGCCATCTCTTGGAAGATATGTTCTTGACAAAGTTTCAGTTATGTTCTCAACTTTACAACTGATAGTTTCGGGTCAAATTGACCACAAGCATTCTTGAAGAGAGATTGTTCTTTTAATACTATATAAGCGTTTTTGTTTGGAT

Coding sequence (CDS)

ATGGATTCGTCCAAAGAAGAAGATGTTCCCGTTTTTCTTGATCGCTCTTCTCGGATGACTAGAGGGAAGAGGATGACCAAGTTGCTTGATGAGGAAGCTGAGGAAGACGAGTTGTTTTGGAATCAGGATGCTCTCAGAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGTTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAACCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGACCACAAATGAAAAAGCGATTAATATTTCCTGGAAAGACTTCTAAGAACAAGAATAAAAAAAGAGCTGTTTCCAAAGTTGAAAAACCTTCCAAAGATGAAGCATCAACTGATCAGTCTACACCTCCTGAACATCATGATACACCGGATGATACCGAAGTTGAAAGAACTGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGAGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCAGGTGAGGAGAAGAAAATGAGTCAGGAAGAAATGCTTCTTGAAGCAGCTCAAACAGAAATCATGAACTTGAGGAACTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCCCGAATACAATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCACATCAGTTCCATATCCAGAGAAAGCTGTGTGTGTGATCACAGGTTTGCCTGCAAAGTATCGTGACCCGAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTTTTGCGGATGATAGTACGGTAGCCAAGGAAATGGACATGGGAAAATTATTTGCTTCACTTTCTGGTAATGGATTCTCAGCGAGGCGGAAGAGATCAGCACCTCAAAATAAAAATGAAATGTCCTACTTGCGCCACTTTTCTCGTTTTCGCCAAATTCCAGTCTTCGACTCTGATGTTTCTGATTAG

Protein sequence

MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEVVDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDSTVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD*

Homology

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BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot
Match: F4IP06 (SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.8e-106
Identity = 222/348 (63.79%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 6   EEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEVVDEFD 65
           EE+  VFLDR++R TRGKRMTKLLD+E EEDE FWNQ+AL+E+E DDEYE E EV DEFD
Sbjct: 5   EEEPMVFLDRTTRATRGKRMTKLLDDEVEEDEQFWNQEALKEEEHDDEYEAEREVADEFD 64

Query: 66  SDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKK--RAVSKV------EKPSK 125
           SDFN+DE EP+  A NE + R   KKRLI+PGKT+  K KK  + VS++      EKP +
Sbjct: 65  SDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGE 124

Query: 126 DEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNP 185
           +  + +Q    E ++  +D E E+ +RKSTRTSV+VRQAERDA+RAA+QAT KPI+RK  
Sbjct: 125 ELGNKEQE-EKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPIQRKKV 184

Query: 186 GEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGC 245
           GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAVY GP+I+Y S++GC
Sbjct: 185 GEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAVYKGPQIRYHSKDGC 244

Query: 246 SYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFA 305
           +YLEF  G+SF +ELST SVPYPEKAVCVITGLPAKYRDPKTGLPYAT++AFK IRERF 
Sbjct: 245 NYLEFCNGASFNSELSTKSVPYPEKAVCVITGLPAKYRDPKTGLPYATRDAFKAIRERFM 304

Query: 306 DD-STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRF 345
           D+   + K+M+MG LF +L   GF+ ++KR+     N+   LR  +RF
Sbjct: 305 DEHDGLRKKMEMGDLFDTLVAKGFATKQKRTKIPKSNKSFSLRSSARF 351

[Close]

BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot
Match: Q5E9F6 (Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.9e-12
Identity = 98/330 (29.70%), Postives = 148/330 (44.85%), Query Frame = 0


Query: 15  RSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYE-EEPEVVDEFDSDFNEDES 74
           R+ R T G R++ LL++E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEKEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEASTDQS---TPPEH 134
           + E  ++ EA+E P+ K+R++   K  K   K     KV  P+     T +     P E 
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVV--TKAYKEPLKSLRPRKVSTPAGSSQKTREEKALLPLEL 126

Query: 135 HDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLL 194
            D  D T+  +++R+ST       +  R       +   +  +RK P  E+ ++QEE+L 
Sbjct: 127 QD--DGTDSRKSMRQST------AEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLR 186

Query: 195 EAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------- 254
           EA  TE +NLR+LE    R E  KK+ +  K    GP I Y S                 
Sbjct: 187 EAKITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVD 246

Query: 255 --------------------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCV 297
                                     R   +++ FS  ++F+        P  P + VC 
Sbjct: 247 VEGLDPAPMASALAARAGTGPVIPPARCSRTFITFSDDATFEEWFPQGRTPKIPVREVCP 306

[Close]

BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot
Match: Q9VKM6 (Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaster OX=7227 GN=YL-1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-11
Identity = 96/319 (30.09%), Postives = 139/319 (43.57%), Query Frame = 0


Query: 15  RSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEVVDEFDSDFNEDESE 74
           RS R   G ++  LL+EE E+D    +    +EDE D EYE++ E  D  DSDF+ DE++
Sbjct: 5   RSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEEEDVVDSDFSIDEND 64

Query: 75  PEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEASTDQSTPPEHHDTP 134
                + EA E    KKR      T   K  K AV K  K          +TP  H   P
Sbjct: 65  EPVSDQEEAPE----KKRKRGVVNTKAYKETKPAVKKETK----------ATPALHKKRP 124

Query: 135 DDTEVER----------TVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMS 194
                +R          + RKS RTS  ++          L    K  K+K   E+   +
Sbjct: 125 GGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPT 184

Query: 195 QEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYLEFSK 254
           QEE+L EA  TE  N ++LE+    E E KK++   K  ++GP I+Y S    +  + ++
Sbjct: 185 QEELLEEAKITEEENTKSLEKFQKMELE-KKKSRPTKRTFSGPTIRYHSLTMPAMRKPTR 244

Query: 255 GSS---------------------------FQAELSTTSVPYPEKAVCVITGLPAKYRDP 297
           G++                           FQ+     + P     +C IT LPA+Y DP
Sbjct: 245 GANPAVDSKDLAGKCERTFVTIENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDP 304

[Close]

BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot
Match: Q15906 (Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 GN=VPS72 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 100/330 (30.30%), Postives = 147/330 (44.55%), Query Frame = 0


Query: 15  RSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYE-EEPEVVDEFDSDFNEDES 74
           R+ R T G R++ LL+ E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKP--SKDEASTDQS-TPPEH 134
           + E  ++ EA+E P+ K+R++   K  K   K     KV  P  S  +A  +++  P E 
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVV--TKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLEL 126

Query: 135 HDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLL 194
            D   D+      RKS R S    +  R       +   +  +RK P  E+ ++QEE+L 
Sbjct: 127 QDDGSDS------RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLR 186

Query: 195 EAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------- 254
           EA  TE +NLR+LE    R E  KK+ +  K    GP I Y S                 
Sbjct: 187 EAKITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVD 246

Query: 255 --------------------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCV 297
                                     R   +++ FS  ++F+        P  P + VC 
Sbjct: 247 IEGLDPAPSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCP 306

[Close]

BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot
Match: Q5R5V9 (Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 100/330 (30.30%), Postives = 147/330 (44.55%), Query Frame = 0


Query: 15  RSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYE-EEPEVVDEFDSDFNEDES 74
           R+ R T G R++ LL+ E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKP--SKDEASTDQS-TPPEH 134
           + E  ++ EA+E P+ K+R++   K  K   K     KV  P  S  +A  +++  P E 
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVV--TKAYKEPLKSLRPRKVSTPAGSSQKAREEKALLPLEL 126

Query: 135 HDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLL 194
            D   D+      RKS R S    +  R       +   +  +RK P  E+ ++QEE+L 
Sbjct: 127 QDDGSDS------RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLR 186

Query: 195 EAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLS----------------- 254
           EA  TE +NLR+LE    R E  KK+ +  K    GP I Y S                 
Sbjct: 187 EAKITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVD 246

Query: 255 --------------------------RNGCSYLEFSKGSSFQAELSTTSVP-YPEKAVCV 297
                                     R   +++ FS  ++F+        P  P + VC 
Sbjct: 247 IEGLDPAPSASALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCP 306

[Close]

BLAST of CsGy5G005120 vs. NCBI nr
Match: XP_004143668.1 (SWR1 complex subunit 2 isoform X1 [Cucumis sativus] >KGN50339.1 hypothetical protein Csa_000092 [Cucumis sativus])

HSP 1 Score: 662 bits (1709), Expect = 3.54e-239
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120
           VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA
Sbjct: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120

Query: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180
           STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE
Sbjct: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180

Query: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240
           KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL
Sbjct: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240

Query: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300
           EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS
Sbjct: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300

Query: 301 TVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
           TVAKEMDMG+LFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD
Sbjct: 301 TVAKEMDMGELFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356

[Close]

BLAST of CsGy5G005120 vs. NCBI nr
Match: XP_008467321.1 (PREDICTED: SWR1 complex subunit 2 [Cucumis melo])

HSP 1 Score: 633 bits (1633), Expect = 1.35e-227
Identity = 337/356 (94.66%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKE+DVPVFLDRSSR+TRGKRMTKLLDEEAEEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEDDVPVFLDRSSRLTRGKRMTKLLDEEAEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120
            DEFDSDFNEDESEPEEEAENEA+ER QMKKRLIFPGKTSKNKNKKRAVSK+EKPSKDEA
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKTSKNKNKKRAVSKIEKPSKDEA 120

Query: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180
           STD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE
Sbjct: 121 STDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180

Query: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240
           KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI YLSRNGCSYL
Sbjct: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRICYLSRNGCSYL 240

Query: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300
           EFSKGSSFQAELSTTSVPYPEKA CVITGLPA+YRDPKTGLPYATKEAFKTIRERFADDS
Sbjct: 241 EFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYATKEAFKTIRERFADDS 300

Query: 301 TVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
           +VAK+MDMG LFASLSG+GFSARRKRS PQNKNEMSY RHFSRFRQIP FDSD+SD
Sbjct: 301 SVAKQMDMGYLFASLSGSGFSARRKRSTPQNKNEMSYSRHFSRFRQIPAFDSDISD 356

[Close]

BLAST of CsGy5G005120 vs. NCBI nr
Match: XP_038907261.1 (SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907263.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907264.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907265.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 629 bits (1623), Expect = 4.67e-226
Identity = 339/357 (94.96%), Postives = 344/357 (96.36%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEED PVFLDRSSR+TRGKRMTKLLDEE EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTS-KNKNKKRAVSKVEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKTS KNKNKKR VSKVEKPSKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNKKRVVSKVEKPSKDE 120

Query: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240
           EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADD 300
           LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPA+YRDPKTGLPYATKEAFKTIRERFADD
Sbjct: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADD 300

Query: 301 STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
           S VAKEMDMG LFASLSGNGFSARRKRS PQNK EMSYLRHFSRFRQIP FDSD+SD
Sbjct: 301 SMVAKEMDMGYLFASLSGNGFSARRKRSTPQNKKEMSYLRHFSRFRQIPAFDSDLSD 357

[Close]

BLAST of CsGy5G005120 vs. NCBI nr
Match: XP_022970136.1 (SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2 [Cucurbita maxima])

HSP 1 Score: 610 bits (1572), Expect = 2.75e-218
Identity = 330/357 (92.44%), Postives = 339/357 (94.96%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEED  VFLDRSSR+TRGKRMTKLLD+E EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKT-SKNKNKKRAVSKVEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKT SKNKNKKR VSK+EK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRIQYLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADD 300
           LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPA+YRDPKTGLPYATKEAFKTIRERFADD
Sbjct: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADD 300

Query: 301 STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
              AKEMDMG LFA+LSG GFSARRKRS PQNKNE+SYLR FSRFRQIP FDSD+SD
Sbjct: 301 GMGAKEMDMGYLFATLSGKGFSARRKRSTPQNKNEISYLRPFSRFRQIPAFDSDLSD 357

[Close]

BLAST of CsGy5G005120 vs. NCBI nr
Match: XP_023550830.1 (SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609 bits (1571), Expect = 3.90e-218
Identity = 330/357 (92.44%), Postives = 339/357 (94.96%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEED  VFLDRSSR+TRGKRMTKLLD+E EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKT-SKNKNKKRAVSKVEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKT SKNKNKKR VSK+EK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRIQYLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADD 300
           LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPA+YRDPKTGLPYATKEAFK+IRERFADD
Sbjct: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAFKSIRERFADD 300

Query: 301 STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
              AKEMDMG LFASLSG GFSARRKRS PQNKNE+SYLR FSRFRQIP FDSD+SD
Sbjct: 301 GMGAKEMDMGYLFASLSGKGFSARRKRSTPQNKNEISYLRPFSRFRQIPAFDSDLSD 357

[Close]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL
Match: A0A0A0KN54 (YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 SV=1)

HSP 1 Score: 662 bits (1709), Expect = 1.71e-239
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120
           VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA
Sbjct: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120

Query: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180
           STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE
Sbjct: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180

Query: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240
           KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL
Sbjct: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240

Query: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300
           EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS
Sbjct: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300

Query: 301 TVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
           TVAKEMDMG+LFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD
Sbjct: 301 TVAKEMDMGELFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356

[Close]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL
Match: A0A1S3CUJ8 (SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1)

HSP 1 Score: 633 bits (1633), Expect = 6.53e-228
Identity = 337/356 (94.66%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKE+DVPVFLDRSSR+TRGKRMTKLLDEEAEEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEDDVPVFLDRSSRLTRGKRMTKLLDEEAEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120
            DEFDSDFNEDESEPEEEAENEA+ER QMKKRLIFPGKTSKNKNKKRAVSK+EKPSKDEA
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKTSKNKNKKRAVSKIEKPSKDEA 120

Query: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180
           STD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE
Sbjct: 121 STDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180

Query: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240
           KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI YLSRNGCSYL
Sbjct: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRICYLSRNGCSYL 240

Query: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300
           EFSKGSSFQAELSTTSVPYPEKA CVITGLPA+YRDPKTGLPYATKEAFKTIRERFADDS
Sbjct: 241 EFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYATKEAFKTIRERFADDS 300

Query: 301 TVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
           +VAK+MDMG LFASLSG+GFSARRKRS PQNKNEMSY RHFSRFRQIP FDSD+SD
Sbjct: 301 SVAKQMDMGYLFASLSGSGFSARRKRSTPQNKNEMSYSRHFSRFRQIPAFDSDISD 356

[Close]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL
Match: A0A6J1HZS7 (SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1)

HSP 1 Score: 610 bits (1572), Expect = 1.33e-218
Identity = 330/357 (92.44%), Postives = 339/357 (94.96%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEED  VFLDRSSR+TRGKRMTKLLD+E EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKT-SKNKNKKRAVSKVEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKT SKNKNKKR VSK+EK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRIQYLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADD 300
           LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPA+YRDPKTGLPYATKEAFKTIRERFADD
Sbjct: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADD 300

Query: 301 STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
              AKEMDMG LFA+LSG GFSARRKRS PQNKNE+SYLR FSRFRQIP FDSD+SD
Sbjct: 301 GMGAKEMDMGYLFATLSGKGFSARRKRSTPQNKNEISYLRPFSRFRQIPAFDSDLSD 357

[Close]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL
Match: A0A6J1EM84 (SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1)

HSP 1 Score: 607 bits (1566), Expect = 1.09e-217
Identity = 330/357 (92.44%), Postives = 338/357 (94.68%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEED  VFLDRSSR+TRGKRMTKLLD+E EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKT-SKNKNKKRAVSKVEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGKT SKNKNKKR VSK+EK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRIQYLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADD 300
           LEFSKGSSFQAELSTTSVPYPEKAVCVITGL A+YRDPKTGLPYATKEAFKTIRERFADD
Sbjct: 241 LEFSKGSSFQAELSTTSVPYPEKAVCVITGLRARYRDPKTGLPYATKEAFKTIRERFADD 300

Query: 301 STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQIPVFDSDVSD 356
              AKEMDMG LFASLSG GFSARRKRS PQNKNE+SYLR FSRFRQIP FDSD+SD
Sbjct: 301 GMGAKEMDMGYLFASLSGKGFSARRKRSTPQNKNEISYLRPFSRFRQIPAFDSDLSD 357

[Close]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL
Match: A0A5A7UJC3 (SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00240 PE=3 SV=1)

HSP 1 Score: 597 bits (1538), Expect = 1.35e-212
Identity = 323/346 (93.35%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60
           MDSSKEEDVPVFLDRSSR+TRGKRMTKLLDEEAEEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDVPVFLDRSSRLTRGKRMTKLLDEEAEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKKRAVSKVEKPSKDEA 120
            DEFDSDFNEDESEPEEEAENEA+ER QMKKRLIFPGKTSKNKNKKRAVSK+EKPSKDEA
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGKTSKNKNKKRAVSKIEKPSKDEA 120

Query: 121 STDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180
           STD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE
Sbjct: 121 STDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEE 180

Query: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSYL 240
           KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI YLSRNGCSYL
Sbjct: 181 KKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRICYLSRNGCSYL 240

Query: 241 EFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDS 300
           EFSKGSSFQAELSTTSVPYPEKA CVITGLPA+YRDPKTGLPYATKEAFKTIRERFADDS
Sbjct: 241 EFSKGSSFQAELSTTSVPYPEKAACVITGLPARYRDPKTGLPYATKEAFKTIRERFADDS 300

Query: 301 TVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRFRQ 346
           +VAK+MDMG LFASLSG+GFSARRKRS PQNKNEM   +    FRQ
Sbjct: 301 SVAKQMDMGYLFASLSGSGFSARRKRSTPQNKNEMKGEKTVFCFRQ 346

[Close]

BLAST of CsGy5G005120 vs. TAIR 10
Match: AT2G36740.1 (sequence-specific DNA binding transcription factors;DNA binding;DNA binding )

HSP 1 Score: 386.0 bits (990), Expect = 3.4e-107
Identity = 222/348 (63.79%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 6   EEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEVVDEFD 65
           EE+  VFLDR++R TRGKRMTKLLD+E EEDE FWNQ+AL+E+E DDEYE E EV DEFD
Sbjct: 5   EEEPMVFLDRTTRATRGKRMTKLLDDEVEEDEQFWNQEALKEEEHDDEYEAEREVADEFD 64

Query: 66  SDFNEDESEPEEEAENEADERPQMKKRLIFPGKTSKNKNKK--RAVSKV------EKPSK 125
           SDFN+DE EP+  A NE + R   KKRLI+PGKT+  K KK  + VS++      EKP +
Sbjct: 65  SDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGE 124

Query: 126 DEASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNP 185
           +  + +Q    E ++  +D E E+ +RKSTRTSV+VRQAERDA+RAA+QAT KPI+RK  
Sbjct: 125 ELGNKEQE-EKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPIQRKKV 184

Query: 186 GEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGC 245
           GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAVY GP+I+Y S++GC
Sbjct: 185 GEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAVYKGPQIRYHSKDGC 244

Query: 246 SYLEFSKGSSFQAELSTTSVPYPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFA 305
           +YLEF  G+SF +ELST SVPYPEKAVCVITGLPAKYRDPKTGLPYAT++AFK IRERF 
Sbjct: 245 NYLEFCNGASFNSELSTKSVPYPEKAVCVITGLPAKYRDPKTGLPYATRDAFKAIRERFM 304

Query: 306 DD-STVAKEMDMGKLFASLSGNGFSARRKRSAPQNKNEMSYLRHFSRF 345
           D+   + K+M+MG LF +L   GF+ ++KR+     N+   LR  +RF
Sbjct: 305 DEHDGLRKKMEMGDLFDTLVAKGFATKQKRTKIPKSNKSFSLRSSARF 351

The following BLAST results are available for this feature:

BLAST of CsGy5G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IP06	4.8e-106	63.79	SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1	[more]
Q5E9F6	8.9e-12	29.70	Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=...	[more]
Q9VKM6	1.5e-11	30.09	Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaste...	[more]
Q15906	1.7e-10	30.30	Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 G...	[more]
Q5R5V9	1.7e-10	30.30	Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 G...	[more]

BLAST of CsGy5G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143668.1	3.54e-239	99.72	SWR1 complex subunit 2 isoform X1 [Cucumis sativus] >KGN50339.1 hypothetical pro...	[more]
XP_008467321.1	1.35e-227	94.66	PREDICTED: SWR1 complex subunit 2 [Cucumis melo]	[more]
XP_038907261.1	4.67e-226	94.96	SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 compl...	[more]
XP_022970136.1	2.75e-218	92.44	SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2...	[more]
XP_023550830.1	3.90e-218	92.44	SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN54	1.71e-239	99.72	YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 ...	[more]
A0A1S3CUJ8	6.53e-228	94.66	SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1	[more]
A0A6J1HZS7	1.33e-218	92.44	SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1	[more]
A0A6J1EM84	1.09e-217	92.44	SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1	[more]
A0A5A7UJC3	1.35e-212	93.35	SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]

BLAST of CsGy5G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36740.1	3.4e-107	63.79	sequence-specific DNA binding transcription factors;DNA binding;DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..149
IPR013272	Vps72/YL1, C-terminal	SMART	SM00993	YL1_C_2	coord: 263..292 e-value: 1.1E-15 score: 68.2
IPR013272	Vps72/YL1, C-terminal	PFAM	PF08265	YL1_C	coord: 264..292 e-value: 2.7E-17 score: 62.2
IPR008895	Vps72/YL1 family	PFAM	PF05764	YL1	coord: 15..233 e-value: 7.5E-35 score: 121.2
IPR008895	Vps72/YL1 family	PANTHER	PTHR13275	YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1	coord: 4..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G005120.2	CsGy5G005120.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043486	histone exchange
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0005634	nucleus