CsGy5G004660 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G004660
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L36
LocationGy14Chr5: 3040469 .. 3042618 (-)
RNA-Seq ExpressionCsGy5G004660
SyntenyCsGy5G004660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAGATTCATCGAAACAGGTGAGAATCCGTTGCTTTTAGAGTCGTTGTTCTTTGGTTAGTTATCAATTTTGCAATCGTTGTTCATTGGTAAGTTCACCTCTGTTAATGGTTTCAGTGATACAGAAAGGGATTTTTTAGGTTAGTTTGTTTGAAACAATTGAATGATTGTGGACCGTTGTGCATTCTGGGATTTTTTTTATTGTACTCGGGAATTTTATGTCTGCAGCTGTACTTTGAATGTGCTTGGTGAAATAAGTTCGGACTTGGCTGGAAATTTGCTTGGTTAATGCTTGATTTAGAGACCCAGTTTTAGTTAGACAGAGTAAACGTTAGGAGATTTATTTTCGTCTTTGCAGAATTAGGGTTTTGCAGTTGAACTTATTTTTGATGGAGTGACTAATTGGGTTTTATTGAAACAGGTAATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAGTAAGTCAATCGACATGAAACTAGATGTTTTAAAATTTTCTTTGGTGGTGTTAGTTAGCTGTTTAGGAGATTAAGGAACGAGTTTAGGTTATTTTATTTTATTGGACAATTTCTGAACTGTGGTTACTTACTTTTCATATGTTGCTGAAAAAGTCTTGTTAGATTCTTCATATACGAGCATACAAAATTTAAGATTGTGTTCTCAAATTTCTGTTTTCATACAAATCAATGTAGAAATCAAGTAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGTAATCCTTCTTCCTTCGTAGAAGGACTGTCTGCTGCTTTTATATTTAAACTTACGGCCTAAGTCATGGTTTGTTTATGTGGAAAGTTCTAATATTATATTTAGATCTGCTCCTTTCAAAAGAATCCTAGGCACATTAGTTTGGCTAATGTGTTGGTGTCCAACGCTCTGATGGACACTAGTTAGTACAATGGATGTATATCCAACGCTTGATGGACACTAATTACAATGATGTATTAGACGCCAGTTTCAAACTTTGGAGTTAACGTTGGCCGAACATTTGTTAAATTTAGCTTGACTTTGAATATAATTTGAGAACAAAAATCACCAGACACATTTTTTAAAGAATGTAAATTCTCAAACCTTCTGACTCTGAATTTTCTTGTATAAAAATAATGTACATCTTTAGCAAAATGTACATCACCAGTTGACGTATTCTTGTTGTGTCGATGTTCTTAGTACTCTTATAAAATGATGAATGTGTTCGTCGCATCTGTTTCTTGTATTTTTATCAATCATTTTTAAGATGTGGGTTGAAATTTGCCAGGAAAGGTACATTCTCATTTCATGACTGGATATATTGTATTTTCAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGAGATCTACACTTGCTCATTCATTCAAAGTCTTGCACTGTGGCTACTCATTTTTGTTTGTTTTAGGTTTCAATTTGTCAGAGACTGAGACCGAGCTGGAGCTTATAATCAATTTCAGTTTTGTGATCTTTGAACTTGTTTTACTAACACCCAATTTTGTTATGGCTCCGTTTGTTTCAATGATGCATTGTGGTTTGATGAATTAATTAGCCAGTCGTGTCATTTTTTGAGTTTGTGGTTTATGTCTTCCCCTTGATTCATCAGTTTATTCTATATTGGGTTTTAAAATATTTGAGAATTTTAAGTATTTTTATGAACTTTATATACTTACATAACAAAATCTTTCTAGATATGTTCATTCATAGGGTTGGAACATTTTGTCAACATTCGTATTTAAAACTTTTGATAATAATAGAAGCATATTTGAAAGTGATTTTGTTGGAGTTAGAAGTTATTTTGAAATAGTAAAGTGAATCAAAGCATTTATAAACAGAAAGTATTTGATAGATAGTAATTGATAAAGACTAACATGTTTAGAATTTTTGTTGTTTCATTTATATCATATATTTTAC

mRNA sequence

GTCAGATTCATCGAAACAGGTGAGAATCCGTTGCTTTTAGAGTCGTTGTTCTTTGGTTAGTTATCAATTTTGCAATCGTTGTTCATTGGTAATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAAAATCAAGTAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGAGATCTACACTTGCTCATTCATTCAAAGTCTTGCACTGTGGCTACTCATTTTTGTTTGTTTTAGGTTTCAATTTGTCAGAGACTGAGACCGAGCTGGAGCTTATAATCAATTTCAGTTTTGTGATCTTTGAACTTGTTTTACTAACACCCAATTTTGTTATGGCTCCGTTTGTTTCAATGATGCATTGTGGTTTGATGAATTAATTAGCCAGTCGTGTCATTTTTTGAGTTTGTGGTTTATGTCTTCCCCTTGATTCATCAGTTTATTCTATATTGGGTTTTAAAATATTTGAGAATTTTAAGTATTTTTATGAACTTTATATACTTACATAACAAAATCTTTCTAGATATGTTCATTCATAGGGTTGGAACATTTTGTCAACATTCGTATTTAAAACTTTTGATAATAATAGAAGCATATTTGAAAGTGATTTTGTTGGAGTTAGAAGTTATTTTGAAATAGTAAAGTGAATCAAAGCATTTATAAACAGAAAGTATTTGATAGATAGTAATTGATAAAGACTAACATGTTTAGAATTTTTGTTGTTTCATTTATATCATATATTTTAC

Coding sequence (CDS)

ATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAAAATCAAGTAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGA

Protein sequence

MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK*
Homology
[Close]
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-41
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-40
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.1e-40
Identity = 86/104 (82.69%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GAEKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG GA +KK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKK 107

[Close]
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-33
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 92
          TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61 TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 12  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKR 71
           VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 72  ALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE 108
           ALK+ KRKLGTH R KKKREEM+ VLRKM+A    E
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101

[Close]
BLAST of CsGy5G004660 vs. NCBI nr
Match: XP_004140771.1 (60S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal protein L36-2 [Cucumis sativus] >XP_008436991.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >XP_008439254.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >ADN34294.1 60S ribosomal protein l36e [Cucumis melo subsp. melo] >KAA0033670.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KAA0055075.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KGN50297.1 hypothetical protein Csa_000263 [Cucumis sativus] >KGN57388.1 hypothetical protein Csa_009903 [Cucumis sativus])

HSP 1 Score: 203 bits (516), Expect = 1.87e-65
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]
BLAST of CsGy5G004660 vs. NCBI nr
Match: XP_022945858.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958050.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022995694.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023532485.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023532486.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023541175.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >KAG6605730.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035637.1 60S ribosomal protein L36-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 7.64e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of CsGy5G004660 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 7.89e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]
BLAST of CsGy5G004660 vs. NCBI nr
Match: XP_022923053.1 (60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923055.1 60S ribosomal protein L36-2-like isoform X2 [Cucurbita moschata] >XP_022923056.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022985002.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985003.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985004.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023552431.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (509), Expect = 2.19e-64
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of CsGy5G004660 vs. NCBI nr
Match: KAG7014765.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200 bits (509), Expect = 2.26e-64
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match: A0A0A0L6L0 (60S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match: A0A1S3AYD7 (60S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match: A0A5A7UN62 (60S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00730 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match: E5GCU5 (60S ribosomal protein L36 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 3.70e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of CsGy5G004660 vs. TAIR 10
Match: AT3G53740.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of CsGy5G004660 vs. TAIR 10
Match: AT3G53740.3 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of CsGy5G004660 vs. TAIR 10
Match: AT3G53740.4 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of CsGy5G004660 vs. TAIR 10
Match: AT2G37600.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]
BLAST of CsGy5G004660 vs. TAIR 10
Match: AT2G37600.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

The following BLAST results are available for this feature:
BLAST of CsGy5G004660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3521.3e-4180.3660S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1[more]
O809292.4e-4083.8160S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1[more]
Q9LZ579.1e-4082.6960S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1[more]
P528662.2e-3382.4260S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2[more]
Q9LRB82.8e-2870.8360S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1[more]
BLAST of CsGy5G004660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140771.11.87e-65100.0060S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal prot... [more]
XP_022945858.17.64e-6599.0960S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S riboso... [more]
KAG7013242.17.89e-6599.0960S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
XP_022923053.12.19e-6498.1860S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1... [more]
KAG7014765.12.26e-6498.1860S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
BLAST of CsGy5G004660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6L09.08e-66100.0060S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1[more]
A0A1S3AYD79.08e-66100.0060S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1[more]
A0A5A7UN629.08e-66100.0060S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
E5GCU59.08e-66100.0060S ribosomal protein L36 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A6J1H2C53.70e-6599.0960S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=... [more]
BLAST of CsGy5G004660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53740.29.1e-4380.36Ribosomal protein L36e family protein [more]
AT3G53740.39.1e-4380.36Ribosomal protein L36e family protein [more]
AT3G53740.49.1e-4380.36Ribosomal protein L36e family protein [more]
AT2G37600.11.7e-4183.81Ribosomal protein L36e family protein [more]
AT2G37600.21.7e-4183.81Ribosomal protein L36e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 8..101
e-value: 8.5E-43
score: 144.5
IPR000509Ribosomal protein L36ePANTHERPTHR1011460S RIBOSOMAL PROTEIN L36coord: 1..110
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 55..65
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.176060S ribosomal protein L36coord: 1..108
e-value: 1.8E-44
score: 152.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR10114:SF1460S RIBOSOMAL PROTEIN L36-1-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004660.2CsGy5G004660.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome