CsGy5G003635 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G003635
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 2411723 .. 2411920 (+)
RNA-Seq ExpressionCsGy5G003635
SyntenyCsGy5G003635
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATGACATGTGACCTAACCTATCATAAGAAAATTACATGGGTGATGAGGATAGGACCGGACTCAAAGACCAAAGAAAGGAAGTGTATTAGTAGCGCCAAGGGGCAGGCGTTTGGGTTTGGGTTTGGCAGCCCCACCTGTGGGCACAGCCACAGAGCCTTTGCCCAAAACCCTTGGATTGGTTCTTTGTTGTAA

mRNA sequence

ATGGTTATGACATGTGACCTAACCTATCATAAGAAAATTACATGGGTGATGAGGATAGGACCGGACTCAAAGACCAAAGAAAGGAAGTGTATTAGTAGCGCCAAGGGGCAGGCGTTTGGGTTTGGGTTTGGCAGCCCCACCTGTGGGCACAGCCACAGAGCCTTTGCCCAAAACCCTTGGATTGGTTCTTTGTTGTAA

Coding sequence (CDS)

ATGGTTATGACATGTGACCTAACCTATCATAAGAAAATTACATGGGTGATGAGGATAGGACCGGACTCAAAGACCAAAGAAAGGAAGTGTATTAGTAGCGCCAAGGGGCAGGCGTTTGGGTTTGGGTTTGGCAGCCCCACCTGTGGGCACAGCCACAGAGCCTTTGCCCAAAACCCTTGGATTGGTTCTTTGTTGTAA

Protein sequence

MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPWIGSLL*
Homology
[Close]
BLAST of CsGy5G003635 vs. NCBI nr
Match: KGN50196.1 (hypothetical protein Csa_000680 [Cucumis sativus])

HSP 1 Score: 144 bits (363), Expect = 1.65e-43
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW 60
          MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW
Sbjct: 1  MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW 60

Query: 61 IGSLL 65
          IGSLL
Sbjct: 61 IGSLL 65

[Close]
BLAST of CsGy5G003635 vs. ExPASy TrEMBL
Match: A0A0A0KR43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158520 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 7.96e-44
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW 60
          MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW
Sbjct: 1  MVMTCDLTYHKKITWVMRIGPDSKTKERKCISSAKGQAFGFGFGSPTCGHSHRAFAQNPW 60

Query: 61 IGSLL 65
          IGSLL
Sbjct: 61 IGSLL 65

The following BLAST results are available for this feature:
BLAST of CsGy5G003635 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G003635 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50196.11.65e-43100.00hypothetical protein Csa_000680 [Cucumis sativus][more]
BLAST of CsGy5G003635 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR437.96e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158520 PE=4 SV=1[more]
BLAST of CsGy5G003635 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G003635.1CsGy5G003635.1mRNA