CsGy5G002920 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAAACTTCAGGGTTCATTCATGGAGCCATGTGATACTTTTTTTTTCCTTTGACGTAAATGCCCTTGCCCTTCCTGCATTATCCCCACTTCACCCCACCTCCTTAGCCTAGCCGTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCATGGCTAACCCCTGAAGAAACTCCATTCTTCCCTTTTACACTTCTCTTCTCAAACTCTCATACCCGTAATTTCTTTTTGCCCTTGTTTACCCCCCTCCCCCTTGATATATTTCCCTCTGTTTCTGGCTGTGGCATTGGGGATAAGGAGGTAAAAGAGAAGAGGAGCAAAATGGGAATGGGAACTAGCATATTTATCATAAGGTGGATCAATTTTCTCACCATGGTATGTTTGATTCCTATTGTTTTTTTTCTCTGTAAGATGATGTTTTTATGTTACATTGCTTTTTTGGATATTTGTTCTGTTCTGTTTTTTCTTTTTCTTTCTTTCTTTTTTTGCTCCTATGTCTTTGGATTTTGTTTTAGTGTCGTGTAAATGGTTCTGTTTATGTTTCGCCAGTGTGTTTGATGAGGTTTCTTGTATGCTTGATGGGGTTTGCCTCCACTGGTTCTTGGAAAATTTTCATATGTTCGATGAGTTTCATTGTTTTTCTTTTTGAGGTTCTTGTTGGGTTGTCTTTGACATTGGATCAAATGGCATTTGGTTTTTAGTTCTTGAAAATTAAGCTTAGAAACACTACTTCTATCTATGAATATCTTTGGTTGTTGGTCTACTCTTCAGTCATAATTTCAAAATGAAAGTAGTTTAAAAAGTTGTTTTTGTTTATGGATTTGTCTGTGAAATTAAATGTTTTCGTAGTAAAGATAAAAACTACTGTAAAGAAATGGTGAGAAAAGACAACAATTTTCAAAAACTAAATACTAAATAGTTCTTTAATGGAGTCTTACGTTAGCTAATTCTTCGTTCCTGTTTTAGATAGTTTGGAATCAATCGATCTAGTTCTCATTGGAGAATGTATTACACTATCCCTTATGGTTTCAAGATTGATACTTTATAGTTCAGTCCCTAGGAAATGAAAGATAGTTGTCTTAGTACATTTGATAAATCAATGAAAAAGGAGCTGTAATTCTTTTGAGTTTATTTGTGCATACCTAATAATTTATCTAGCTTTAAAGCGAAAGAAGATGAGACCTCTTCGTAAGCTCAAGGGTATAAAGATGTTTTTTATTTTCATTAATCAAGAAAGGGAAAAAATTACAAAAAAGATGCATCTATGAAATTTACGAACAATCTTCACCTTCCTACTCTTATCATAAATAAGAAACAAAAACTACAGCGAAGACCCAGATCACCTTCTTTGGGGTTGTGTGGAGCTGTTTCTTACTAGAGTTTGTTTTTGAGGTAGCTGACCAGAGGGATGTTTGTGCAATGATCGAGGACTTCCTCCTTCATATGCCTTCAAGAAAGAAAGTTCGTTGCTTGCAGCCTATGGGGTGTGTGTTCTGTTGTAAGATGTTTCGAGGGCGAGTAACTATAGAGTGTTCAAAGGTGTGGATAGGGACTCTAGTGAGGTTTGGTTCTTGATGAGATTCCATGAGAACCTTGGGCTTTAGTATCAAAGTTATTAAATTATTTTGTAGGTAACATCTTACTTGGCCGGAAATTCTCTCTCTAATGTTTTTTTTTCTTTTTTGTAAGCGCTTGTATTCTTTCTTTTCTTTTTTTCTTCAATAAAAGTTGTTGATTCTATAAACAAATAGGCCTAAAGATGGCTTAAAATAACCATGGGAATGAGTTGTTGGAGCAGGGCTATAAGCATCAGTTTTACTAAGCCTTTAACTAGATTAATGGGCTCTTGAATCACTGTGTATCCACATGTTTCAGTTTCTGGCTATTCTTGTTATAATATTTGGGATATGGATGGGCACCCACCACGACGGTTGTCGAAAATCTCTCACTCTTCCTGTCATGGGACTTGGTGGATTCATCTTTGTGGTGTAAGTTCTCTATCATTTTAGGAATATAATCTGATAGAGTATAATCTGATTCACTCACCCAATATTGTTGTTATCAATGTTTTTGATCCAGGTCCATAGTTGGTTTCTTGGGTGCCCTTAAGAACAATTCGATATTGCTGTGGATTGTATCCTTTTAAATGAAAATTTATCTGAACAGTTGATGTTAATCTTCCCAAATTTCGCTTGACCTTGACCTTCTGCACATAGTATCTGATCATGTTGTGCATTACGTTGGTGGGGATTCTCGTGTTTACAGTGTTGGCGTGAGTATATGTTTCTTAAGGCATTTCAATTATCAAATCTATGATAATGCACGGTTAAGAAATCCACCAAACACCAAACAAAAATGCATATAAGCAAGACAATATACTTCTATATAAAATTGAGATGAGTAAAAGTAGGAACCAGCATGATGGCCACAATAATTTCTTTCCCCCCCCCCCCCTTTAAGTTCACTCCTCATTAGTTGTTGATGGATCTTTCATGCTAGATGATTCAAAGAATGCTGTTGTAGTCTAGACTTTGTGATTTGATTTTGTAGCTTTATGGTAAAGTAGGTGGTTCAGAAAAGTTTTCGTTACAGGTCTTCAAAAGTAGCTTCTTATACCTTAAGCAGTGGATTCATGATTCGTATGAACATGTCTTGGATTTCTTTTAAGCCATGTGAGCAGAGGCCAGAATCACATCCTCTAATTATAATAAAACACCATGAGATGATAATTACATTATACTTAACCATGGATTTGTTTTCATCTGTGTACACTTATCTATGTATTTTTCGCCCACACTACTTTTTCTTTTTATTATCTTCGCATGATCCCCTTCAAGATATAAAAGGAAGTATCAAAGTGGACATCTATGGTTGTTGGCATCTTTTAGCTAGCAACAATACATGACTCGTACACTTCCTCTTTGAGAATGCTTTTTAATCTGGCTTTGCTGGCTTCATAGTTGGTATGTAATTTGTATTGTAGTACTTTTCTTGAACCTAACATAATTATTCAAATTTATTTTAGGTTTATTGTTACAAATAATGGATCGGGACATGATGTTGCTGGCTTGAGGTGAGGATATATTTAATTCATTCAAAGAAAGGTGCTTGTTAAGTGATTTTGTTTTGATGATACTTAATCTGAAAGAGCGAAAACGGTTCATCTTCTATCTGTGCTTATAAGAATAACCTAAACCCATGATTATCAGATTTTGATGCTTGTGCATTGATAAGCTGGCATTTCTATGGACTGATATATTTTCCCCTTCTCTTCCCATTTGATGAGGTATAAGGAGTATCAACTACAAGACTATAGTACGTGGTTTCTAAAACAGGTGAGTACAATTTTACCTGTTACTAAGAGAGAAAGAGAGAGATTATCAATTATCCTGATTTTGGCTTTCCTGTTACAGCTTAACAATACTGAAAATTGGATGCGTCTGAAAAGCTGTCTAGTCAAATCCGAGGATTGCAATAACCTTTCAAAAAGATACAAGGTCCTTGTTTTAAGCTCGGTCCATTAGAACAACAGACTATTTGATTATTTTTATCATCACTTTCTCATGAAGCCATTTTTTTTTTACAATTTCAGACTCTCAAGCAGTACAAATTGGCAAAGCTGACGCCCATGGAAGCGGGTTGTTGTAGACCCCCATCCGAGTAGGTGTAACTTCCAAGTTCATAGTTTTTTTGCTATGTTTAAACTGAAACAAACAAAAGAAGAAACCAAATCCTTGTCTTTTCCATAATGCCATAATCTTTTATTCTCCACAATCTTTTTGCGATTTATGACATTGACATGTGAACTCTCGACTTTGTTTCGACGATATTTGAGAAGTGAATATGAATTCTTGTTCTTTTTGACCTCGTGATTCAAATAACAGATGTGGTTATCCAGCTGTTAATGCATCATACTATGACTTGAGCTTTCATCCTGTCAATTCAAACCATGATTGCAAAGTATACAAGAATTCCAAGGCGGTCAAGTGTTACGATTGTGATTCGTGCAAGTAAATAACTAATAACCTTATTCTTCCATTCTCTATTCACTGATGCAGTCCCTGTGAAAATTTTCATCATTATTTGATTGTTTGATCATTCAGGGCCGGAGTCGCACAGTACATGAAAACTGAATGGCGATTGGTTGCTATCTTCAACGTCATTCTATTTGTTGTCTTGGTAAGTCACTTTTCAGCTAGGGTTCCATTTTCGTTTCATCTTCCACCATTTATTTCTTATCTCTTACTTGTATTTACAGCTGATAATCTACTTAGTCGGATGCTGCGCTAGGCGAAAAGCTGCTAGAAATCGATCTAAAGGTTAGTGAATACCGGTTGCGCTTGGTCTACTGCTTAAATATCGAATCGGACCATAGTTGTCTTGTGCTGTGTAAGTGATAACTGTTGGAAGTAGAATTTTTTTTAGCAAAACTCATTCAGTTTGTGTAATATATGCAGCCAGCCATGTTTGTATGTAAAAAGCTTGTTCTTTTGCTAGTACAGTGATTACTATTCATTCCGGTATCGAACTGTATTTCGACCATGAACCATTATTTGCCTACACAGAATGCTGACTTGATTCTTGAC GGAAAACTTCAGGGTTCATTCATGGAGCCATGTGATACTTTTTTTTTCCTTTGACGTAAATGCCCTTGCCCTTCCTGCATTATCCCCACTTCACCCCACCTCCTTAGCCTAGCCGTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCATGGCTAACCCCTGAAGAAACTCCATTCTTCCCTTTTACACTTCTCTTCTCAAACTCTCATACCCGTAATTTCTTTTTGCCCTTGTTTACCCCCCTCCCCCTTGATATATTTCCCTCTGTTTCTGGCTGTGGCATTGGGGATAAGGAGGTAAAAGAGAAGAGGAGCAAAATGGGAATGGGAACTAGCATATTTATCATAAGGTGGATCAATTTTCTCACCATGTTTCTGGCTATTCTTGTTATAATATTTGGGATATGGATGGGCACCCACCACGACGGTTGTCGAAAATCTCTCACTCTTCCTGTCATGGGACTTGGTGGATTCATCTTTGTGGTGTCCATAGTTGGTTTCTTGGGTGCCCTTAAGAACAATTCGATATTGCTGTGGATTTATCTGATCATGTTGTGCATTACGTTGGTGGGGATTCTCGTGTTTACAGTGTTGGCGTTTATTGTTACAAATAATGGATCGGGACATGATGTTGCTGGCTTGAGGTATAAGGAGTATCAACTACAAGACTATAGTACGTGGTTTCTAAAACAGCTTAACAATACTGAAAATTGGATGCGTCTGAAAAGCTGTCTAGTCAAATCCGAGGATTGCAATAACCTTTCAAAAAGATACAAGACTCTCAAGCAGTACAAATTGGCAAAGCTGACGCCCATGGAAGCGGGTTGTTGTAGACCCCCATCCGAATGTGGTTATCCAGCTGTTAATGCATCATACTATGACTTGAGCTTTCATCCTGTCAATTCAAACCATGATTGCAAAGTATACAAGAATTCCAAGGCGGTCAAGTGTTACGATTGTGATTCGTGCAAGGCCGGAGTCGCACAGTACATGAAAACTGAATGGCGATTGGTTGCTATCTTCAACGTCATTCTATTTGTTGTCTTGCTGATAATCTACTTAGTCGGATGCTGCGCTAGGCGAAAAGCTGCTAGAAATCGATCTAAAGGTTAGTGAATACCGGTTGCGCTTGGTCTACTGCTTAAATATCGAATCGGACCATAGTTGTCTTGTGCTGTGTAAGTGATAACTGTTGGAAGTAGAATTTTTTTTAGCAAAACTCATTCAGTTTGTGTAATATATGCAGCCAGCCATGTTTGTATGTAAAAAGCTTGTTCTTTTGCTAGTACAGTGATTACTATTCATTCCGGTATCGAACTGTATTTCGACCATGAACCATTATTTGCCTACACAGAATGCTGACTTGATTCTTGAC ATGGGAATGGGAACTAGCATATTTATCATAAGGTGGATCAATTTTCTCACCATGTTTCTGGCTATTCTTGTTATAATATTTGGGATATGGATGGGCACCCACCACGACGGTTGTCGAAAATCTCTCACTCTTCCTGTCATGGGACTTGGTGGATTCATCTTTGTGGTGTCCATAGTTGGTTTCTTGGGTGCCCTTAAGAACAATTCGATATTGCTGTGGATTTATCTGATCATGTTGTGCATTACGTTGGTGGGGATTCTCGTGTTTACAGTGTTGGCGTTTATTGTTACAAATAATGGATCGGGACATGATGTTGCTGGCTTGAGGTATAAGGAGTATCAACTACAAGACTATAGTACGTGGTTTCTAAAACAGCTTAACAATACTGAAAATTGGATGCGTCTGAAAAGCTGTCTAGTCAAATCCGAGGATTGCAATAACCTTTCAAAAAGATACAAGACTCTCAAGCAGTACAAATTGGCAAAGCTGACGCCCATGGAAGCGGGTTGTTGTAGACCCCCATCCGAATGTGGTTATCCAGCTGTTAATGCATCATACTATGACTTGAGCTTTCATCCTGTCAATTCAAACCATGATTGCAAAGTATACAAGAATTCCAAGGCGGTCAAGTGTTACGATTGTGATTCGTGCAAGGCCGGAGTCGCACAGTACATGAAAACTGAATGGCGATTGGTTGCTATCTTCAACGTCATTCTATTTGTTGTCTTGCTGATAATCTACTTAGTCGGATGCTGCGCTAGGCGAAAAGCTGCTAGAAATCGATCTAAAGGTTAG MGMGTSIFIIRWINFLTMFLAILVIIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVVSIVGFLGALKNNSILLWIYLIMLCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFLKQLNNTENWMRLKSCLVKSEDCNNLSKRYKTLKQYKLAKLTPMEAGCCRPPSECGYPAVNASYYDLSFHPVNSNHDCKVYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVILFVVLLIIYLVGCCARRKAARNRSKG* Homology
BLAST of CsGy5G002920 vs. ExPASy Swiss-Prot
Match: F4I214 (Tetraspanin-10 OS=Arabidopsis thaliana OX=3702 GN=TET10 PE=2 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 5.8e-109 Identity = 187/244 (76.64%), Postives = 215/244 (88.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 8.0e-50 Identity = 99/253 (39.13%), Postives = 157/253 (62.06%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.2e-45 Identity = 93/246 (37.80%), Postives = 148/246 (60.16%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.5e-45 Identity = 91/263 (34.60%), Postives = 155/263 (58.94%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 9.5e-43 Identity = 86/252 (34.13%), Postives = 150/252 (59.52%), Query Frame = 0
BLAST of CsGy5G002920 vs. NCBI nr
Match: XP_004143924.1 (tetraspanin-10 [Cucumis sativus] >XP_008437235.1 PREDICTED: tetraspanin-10 [Cucumis melo]) HSP 1 Score: 532 bits (1370), Expect = 1.33e-190 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsGy5G002920 vs. NCBI nr
Match: XP_038876134.1 (tetraspanin-10 [Benincasa hispida]) HSP 1 Score: 523 bits (1346), Expect = 6.08e-187 Identity = 258/264 (97.73%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of CsGy5G002920 vs. NCBI nr
Match: XP_022159794.1 (tetraspanin-10 [Momordica charantia]) HSP 1 Score: 511 bits (1317), Expect = 1.60e-182 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. NCBI nr
Match: XP_023549833.1 (tetraspanin-10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 511 bits (1316), Expect = 2.28e-182 Identity = 250/264 (94.70%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of CsGy5G002920 vs. NCBI nr
Match: XP_022928822.1 (tetraspanin-10-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 510 bits (1314), Expect = 4.59e-182 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy TrEMBL
Match: A0A0A0KNY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154840 PE=3 SV=1) HSP 1 Score: 532 bits (1370), Expect = 6.45e-191 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy TrEMBL
Match: A0A1S3ATI6 (tetraspanin-10 OS=Cucumis melo OX=3656 GN=LOC103482725 PE=3 SV=1) HSP 1 Score: 532 bits (1370), Expect = 6.45e-191 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy TrEMBL
Match: A0A6J1E3D2 (tetraspanin-10 OS=Momordica charantia OX=3673 GN=LOC111026107 PE=3 SV=1) HSP 1 Score: 511 bits (1317), Expect = 7.76e-183 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy TrEMBL
Match: A0A6J1K8B5 (tetraspanin-10-like OS=Cucurbita maxima OX=3661 GN=LOC111491563 PE=3 SV=1) HSP 1 Score: 510 bits (1314), Expect = 2.22e-182 Identity = 250/264 (94.70%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. ExPASy TrEMBL
Match: A0A6J1EL06 (tetraspanin-10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=3 SV=1) HSP 1 Score: 510 bits (1314), Expect = 2.22e-182 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. TAIR 10
Match: AT1G63260.2 (tetraspanin10 ) HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-113 Identity = 195/263 (74.14%), Postives = 223/263 (84.79%), Query Frame = 0
BLAST of CsGy5G002920 vs. TAIR 10
Match: AT1G63260.1 (tetraspanin10 ) HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-110 Identity = 187/244 (76.64%), Postives = 215/244 (88.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. TAIR 10
Match: AT1G63260.3 (tetraspanin10 ) HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-110 Identity = 187/244 (76.64%), Postives = 215/244 (88.11%), Query Frame = 0
BLAST of CsGy5G002920 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 ) HSP 1 Score: 198.7 bits (504), Expect = 5.7e-51 Identity = 99/253 (39.13%), Postives = 157/253 (62.06%), Query Frame = 0
BLAST of CsGy5G002920 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 ) HSP 1 Score: 184.9 bits (468), Expect = 8.5e-47 Identity = 93/246 (37.80%), Postives = 148/246 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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