CsGy5G002900 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTTCACTACCCTTTGCTTGTTTTTAATCCAAAACATGGGATCATTGGCCCACGGTATCATATCCCTCTTTTTCTTTCTTTTCCTAATTTTAATCACTCTATAAATACTCTCTTAATCACACTTTTCACCCCCCACCACCCCTCTAATCTCTTCCTCCTCTCCTCCCCCGGAATTTTCATTTCTTCATTTCATTCCTTTCTAATTATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGAGAGTTTTTATAGGGTAATTAATTTTTGTTAGTTACTATTAATACTAACAAAAGTGGACTTAGAAAGGGTTAATATATATTGTTATACAAATGTACTAATTAATTTGTTGAGTTTCCAATTTTTTGAAAGTCCATATTTGAATTTTTGTTTTTTTAATTTTAGTTAAAATGTTCCGTTTGATATCTATAGATTTGATCAATTTTGAATTTCATAATGAAAATAG ATGAATCTTCACTACCCTTTGCTTGTTTTTAATCCAAAACATGGGATCATTGGCCCACGGTATCATATCCCTCTTTTTCTTTCTTTTCCTAATTTTAATCACTCTATAAATACTCTCTTAATCACACTTTTCACCCCCCACCACCCCTCTAATCTCTTCCTCCTCTCCTCCCCCGGAATTTTCATTTCTTCATTTCATTCCTTTCTAATTATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGAGAGTTTTTATAGGGTAATTAATTTTTGTTAGTTACTATTAATACTAACAAAAGTGGACTTAGAAAGGGTTAATATATATTGTTATACAAATGTACTAATTAATTTGTTGAGTTTCCAATTTTTTGAAAGTCCATATTTGAATTTTTGTTTTTTTAATTTTAGTTAAAATGTTCCGTTTGATATCTATAGATTTGATCAATTTTGAATTTCATAATGAAAATAG ATGAATCTTCACTACCCTTTGCTTGTTTTTAATCCAAAACATGGGATCATTGGCCCACGGTATCATATCCCTCTTTTTCTTTCTTTTCCTAATTTTAATCACTCTATAAATACTCTCTTAATCACACTTTTCACCCCCCACCACCCCTCTAATCTCTTCCTCCTCTCCTCCCCCGGAATTTTCATTTCTTCATTTCATTCCTTTCTAATTATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA MNLHYPLLVFNPKHGIIGPRYHIPLFLSFPNFNHSINTLLITLFTPHHPSNLFLLSSPGIFISSFHSFLIMDVFIPDDYVIRRRIEKKLAAQAPVKTRHPHPADQRPRNSDKEKEAPAKTGLFRFTATGADNVVFNCFSA* Homology
BLAST of CsGy5G002900 vs. NCBI nr
Match: KAE8647863.1 (hypothetical protein Csa_000530 [Cucumis sativus]) HSP 1 Score: 283 bits (725), Expect = 2.29e-96 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CsGy5G002900 vs. NCBI nr
Match: OMO79504.1 (hypothetical protein CCACVL1_13647 [Corchorus capsularis]) HSP 1 Score: 52.0 bits (123), Expect = 8.68e-06 Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of CsGy5G002900 vs. NCBI nr
Match: XP_007040180.1 (PREDICTED: uncharacterized protein LOC18606492 [Theobroma cacao] >EOY24681.1 Nucleotide binding, putative [Theobroma cacao]) HSP 1 Score: 51.2 bits (121), Expect = 2.32e-05 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CsGy5G002900 vs. NCBI nr
Match: MBA0552860.1 (hypothetical protein [Gossypium lobatum]) HSP 1 Score: 49.3 bits (116), Expect = 9.21e-05 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of CsGy5G002900 vs. NCBI nr
Match: KJB20707.1 (hypothetical protein B456_003G160100 [Gossypium raimondii]) HSP 1 Score: 48.9 bits (115), Expect = 1.29e-04 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CsGy5G002900 vs. ExPASy TrEMBL
Match: A0A0A0KKA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154820 PE=4 SV=1) HSP 1 Score: 144 bits (362), Expect = 2.64e-42 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CsGy5G002900 vs. ExPASy TrEMBL
Match: A0A1R3IAB5 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13647 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.20e-06 Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of CsGy5G002900 vs. ExPASy TrEMBL
Match: A0A061G559 (Nucleotide binding, putative OS=Theobroma cacao OX=3641 GN=TCM_016220 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.12e-05 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CsGy5G002900 vs. ExPASy TrEMBL
Match: A0A7J8LKC3 (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_023636 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.46e-05 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of CsGy5G002900 vs. ExPASy TrEMBL
Match: A0A0D2MPN2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G160100 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.27e-05 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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