CsGy5G002375 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G002375
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 1497418 .. 1497664 (-)
RNA-Seq ExpressionCsGy5G002375
SyntenyCsGy5G002375
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGTGAGAACAGAATAAAAAAATGGTCAGCGGAACTGCGCAGGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

mRNA sequence

ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

Coding sequence (CDS)

ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

Protein sequence

MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIFFILPFPNN*
Homology
[Close]
BLAST of CsGy5G002375 vs. NCBI nr
Match: KGN50063.1 (hypothetical protein Csa_000262 [Cucumis sativus])

HSP 1 Score: 152 bits (383), Expect = 1.79e-46
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60
          MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF
Sbjct: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60

Query: 61 FILPFPNN 68
          FILPFPNN
Sbjct: 61 FILPFPNN 68

[Close]
BLAST of CsGy5G002375 vs. ExPASy TrEMBL
Match: A0A0A0KKH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152290 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 8.69e-47
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60
          MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF
Sbjct: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60

Query: 61 FILPFPNN 68
          FILPFPNN
Sbjct: 61 FILPFPNN 68

The following BLAST results are available for this feature:
BLAST of CsGy5G002375 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G002375 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50063.11.79e-46100.00hypothetical protein Csa_000262 [Cucumis sativus][more]
BLAST of CsGy5G002375 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKH18.69e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152290 PE=4 SV=1[more]
BLAST of CsGy5G002375 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G002375.1CsGy5G002375.1mRNA