CsGy5G000630 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G000630
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUbiquitin-conjugating enzyme E2, putative
LocationGy14Chr5: 363870 .. 366292 (-)
RNA-Seq ExpressionCsGy5G000630
SyntenyCsGy5G000630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTTATTTCATATTTATAATCTTTCGCAATTCTTCCTTCTCTTCCCCTCACGAGCCCTCATTACTGTGAGGGATTTTCTTCAATCTTTGCTCATCAGGTAACTAATCTTCCTTCTTTCTCTCTCTTTTTCTTTTCATTTTCCTTCCATTGATCTCTTCTTCAGCTTCCTCTCTCATGGCGTCCAAGCGGATCTTGAAGGAACTCAAGGATCTGCAGAGGGATCCTCCTACGTCTTGCAGTGCTGGTATTTTCTTTCTCTTCTTTATCATCCTTGTTCTTTCCTGTCTCCTCTGCTGCTTCGGATCGGATGATCTTTTAGTTTTTATCTTCCTCAGAATATTTTGTTTGGTTTGTGTTGAAAATAATGTGCTCGCAATAATTGCACGATCGATTGAATTAGGATGCTCGTTGTTGTTTTTTTTTAAGGAGTTTTTCTTTGAGATATGGTTGAGATTTAATACTACTAATGGAAACTTATGAATTCTGTTCAAACATACACATTTTTCTTTGAAATTATAATTAATAGTTACATGAGCGTAGCTTCTAGGAAAGTCTTAACTGGAAATGTAATTTTGCTTCTGAAACGTCATAGTCTTTTCAGTGAATGTTCATGTGAGTTGGTGTTATTCTTCGCCCGTCCCGATTATTGTTGTGGTTCGTTTTGTCGGGGTGTATTATTTTTTTTTTCTTTTAAATTTTGTTTATATGGGTTAAATCTTTTCTGTTGGCGAAATGTGGACCGATGGGTAAAATCTTTCTTTGTTTTGGGAGAGGGGGAGTGAAGGTTGATAAAAGAGGAAAGTTTCTAATTCCTCCTCTAAATTTGGAAGGAGTATGTAGATATCATTAACCAATTTTGACATTCACTAATGGGAGAGTACAAATAAGGATTTTAAAACATAAGAGACTAAGTTGAAGCTTTTTAAATAATTGGGGCTAAATTGTGCCAACGTTCTAACATTATGAACTAAAACATATACTTACCATTTCAATTATATATTTTTCACGAATGTAAAAGTTTACAAAGATGTAACTTTTTTTTTACGGGAGTTGCTAGTTTTCCTTTCTTGATATGTTCTGCAATTGTCCCAGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCACCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTATTCAATTCTTCTGGCTACCCAATACTTCTGCTTTTGACCATCAATAGGATTCACGAATTTGTTTTGTTTTGTTTTTACCATTGGCCCTTTAGATTTTCCCATTTATGGCAAGCTCAGACCAGTACTTATCTTTTTATTTTACAAACTGTGGGGTGGGGGAACATTGCATGAAATACAAGCATTTTATCCGTTGAACTATACTCATTTTGGTATGAGTATCGATGCTTATCTCATAGACACTTCGACAAAAAATACGTATGAGCAACTAGTGTCTATAGATGAATAAATGTCAGGCCGTATACGTTTTTACATTCTGAAATCTGATTGGGGGACTTCAGGCAATGTTACTGAGATCTCCAGACATGGCCGATAATCTAAATTACGGAAAATAGCTCCTTCTCATTCTGAACGTTTTCAACACCCTCCTAGGTACTTCAGGTAACACAATGATTTAATCTTTCAACTCATTGAATTTATTGATTTTCAGGTAGCGTTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTGGACATATTGAAAGAGCAATGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTTCCCTGGAATCATGAATTTCATTGAAGATCATAGTAAATTAGTATGTAACACATCTAACTCATTTCATGATAATATTGCCTTTGCATTCGCAATATTCATTTTTTCAGACTATATAACCCTATGGTCCAATCAATTTTTTTCACTAATTTACTACGAGTTTCCTTTACACCCAAATGTTGTAGAATCCGGGTTGTCGGGTGAGATTAGTCAAGGTATGCCTTGGTTTGGATACTCATAATTATAAAACAAAAAAAAAAAAAAAGTTAGGGTGATTATTTATTAACTTGAATCTCTTATGCTGAGTTGTATCATGGTCATTTAAATCAGATATGCAATCGTAGTTTACTTGAATCTCTTATGCTGAGTTGTATGTTATATGAAGAGTACACTATATTGTTTCATCTCAAGCATTTTCTTTTGATAAAGTTTTATATTTTCTCTATCTATCAATTGTTGCATCCACTGCCATTGGATTTCTCTCGAGCATGATGGAGATTCCTGTCTCAGATTCAGCCTAAATCTGATATAAATAGGCTTGTTGCATTGTTCTTAATTTTGATTGGTGAGCATTTGGCCTTGAGTTTCTATTGAACGGAT

mRNA sequence

TCTTTTTATTTCATATTTATAATCTTTCGCAATTCTTCCTTCTCTTCCCCTCACGAGCCCTCATTACTGTGAGGGATTTTCTTCAATCTTTGCTCATCAGCTTCCTCTCTCATGGCGTCCAAGCGGATCTTGAAGGAACTCAAGGATCTGCAGAGGGATCCTCCTACGTCTTGCAGTGCTGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCACCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCGTTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTGGACATATTGAAAGAGCAATGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTTCCCTGGAATCATGAATTTCATTGAAGATCATAGTAAATTAGTATGTAACACATCTAACTCATTTCATGATAATATTGCCTTTGCATTCGCAATATTCATTTTTTCAGACTATATAACCCTATGGTCCAATCAATTTTTTTCACTAATTTACTACGAGTTTCCTTTACACCCAAATGTTGTAGAATCCGGGTTGTCGGGTGAGATTAGTCAAGGTATGCCTTGGTTTGGATACTCATAATTATAAAACAAAAAAAAAAAAAAAGTTAGGGTGATTATTTATTAACTTGAATCTCTTATGCTGAGTTGTATCATGGTCATTTAAATCAGATATGCAATCGTAGTTTACTTGAATCTCTTATGCTGAGTTGTATGTTATATGAAGAGTACACTATATTGTTTCATCTCAAGCATTTTCTTTTGATAAAGTTTTATATTTTCTCTATCTATCAATTGTTGCATCCACTGCCATTGGATTTCTCTCGAGCATGATGGAGATTCCTGTCTCAGATTCAGCCTAAATCTGATATAAATAGGCTTGTTGCATTGTTCTTAATTTTGATTGGTGAGCATTTGGCCTTGAGTTTCTATTGAACGGAT

Coding sequence (CDS)

ATGGCGTCCAAGCGGATCTTGAAGGAACTCAAGGATCTGCAGAGGGATCCTCCTACGTCTTGCAGTGCTGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCACCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCGTTCAGAACAAAGGTATTCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTGGACATATTGAAAGAGCAATGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTTCCCTGGAATCATGAATTTCATTGAAGATCATAGTAAATTAGTATGTAACACATCTAACTCATTTCATGATAATATTGCCTTTGCATTCGCAATATTCATTTTTTCAGACTATATAACCCTATGGTCCAATCAATTTTTTTCACTAATTTACTACGAGTTTCCTTTACACCCAAATGTTGTAGAATCCGGGTTGTCGGGTGAGATTAGTCAAGGTATGCCTTGGTTTGGATACTCATAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNFIEDHSKLVCNTSNSFHDNIAFAFAIFIFSDYITLWSNQFFSLIYYEFPLHPNVVESGLSGEISQGMPWFGYS*
Homology
[Close]
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.7e-55
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. NCBI nr
Match: ESR58133.1 (hypothetical protein CICLE_v10022714mg [Citrus clementina] >KDO86395.1 hypothetical protein CISIN_1g032055mg [Citrus sinensis])

HSP 1 Score: 219 bits (558), Expect = 1.18e-70
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103

[Close]
BLAST of CsGy5G000630 vs. NCBI nr
Match: XP_022872998.1 (SUMO-conjugating enzyme UBC9-like [Olea europaea var. sylvestris])

HSP 1 Score: 219 bits (558), Expect = 1.34e-70
Identity = 101/104 (97.12%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWF 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+F
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVYF 104

[Close]
BLAST of CsGy5G000630 vs. NCBI nr
Match: PIA34493.1 (hypothetical protein AQUCO_03700040v1 [Aquilegia coerulea])

HSP 1 Score: 218 bits (555), Expect = 3.06e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWF 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV F
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLF 104

[Close]
BLAST of CsGy5G000630 vs. NCBI nr
Match: EEF33696.1 (ubiquitin-conjugating enzyme E2, putative [Ricinus communis])

HSP 1 Score: 219 bits (557), Expect = 3.53e-70
Identity = 101/113 (89.38%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNFIED 113
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISK W   ++++ E+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKEWKKSVISYWEN 113

[Close]
BLAST of CsGy5G000630 vs. NCBI nr
Match: KJB39128.1 (hypothetical protein B456_007G025200 [Gossypium raimondii])

HSP 1 Score: 218 bits (554), Expect = 6.19e-70
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNFIE 112
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV    ++  I 
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVQHVLKHIH 112

[Close]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match: A0A067H652 (UBC core domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032055mg PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 5.69e-71
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103

[Close]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match: V4TCW8 (UBC core domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10022714mg PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 5.69e-71
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103

[Close]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match: A0A2G5CT86 (UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03700040v1 PE=3 SV=1)

HSP 1 Score: 218 bits (555), Expect = 1.48e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWF 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV F
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLF 104

[Close]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match: B9SRR5 (Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis OX=3988 GN=RCOM_1059140 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.71e-70
Identity = 101/113 (89.38%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNFIED 113
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISK W   ++++ E+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKEWKKSVISYWEN 113

[Close]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match: A0A0D2QIN6 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G025200 PE=3 SV=1)

HSP 1 Score: 218 bits (554), Expect = 3.00e-70
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNFIE 112
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV    ++  I 
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVQHVLKHIH 112

[Close]
BLAST of CsGy5G000630 vs. TAIR 10
Match: AT5G53300.3 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 215.3 bits (547), Expect = 4.1e-56
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWF 105
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV F
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVRF 104

[Close]
BLAST of CsGy5G000630 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-56
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-56
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 132

[Close]
BLAST of CsGy5G000630 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKV 102

[Close]
BLAST of CsGy5G000630 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 103
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKV 102

The following BLAST results are available for this feature:
BLAST of CsGy5G000630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P351329.7e-5597.06SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
P351331.3e-5497.06Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
Q94F471.3e-5496.08Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
P351351.3e-5497.06Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P351312.8e-5496.08Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
BLAST of CsGy5G000630 vs. NCBI nr
Match NameE-valueIdentityDescription
ESR58133.11.18e-7098.06hypothetical protein CICLE_v10022714mg [Citrus clementina] >KDO86395.1 hypotheti... [more]
XP_022872998.11.34e-7097.12SUMO-conjugating enzyme UBC9-like [Olea europaea var. sylvestris][more]
PIA34493.13.06e-7098.08hypothetical protein AQUCO_03700040v1 [Aquilegia coerulea][more]
EEF33696.13.53e-7089.38ubiquitin-conjugating enzyme E2, putative [Ricinus communis][more]
KJB39128.16.19e-7091.07hypothetical protein B456_007G025200 [Gossypium raimondii][more]
BLAST of CsGy5G000630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A067H6525.69e-7198.06UBC core domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032055m... [more]
V4TCW85.69e-7198.06UBC core domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10022... [more]
A0A2G5CT861.48e-7098.08UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_0370... [more]
B9SRR51.71e-7089.38Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis OX=3988 GN=RCOM_10... [more]
A0A0D2QIN63.00e-7091.07UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G0... [more]
BLAST of CsGy5G000630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G53300.34.1e-5696.15ubiquitin-conjugating enzyme 10 [more]
AT4G27960.16.9e-5697.06ubiquitin conjugating enzyme 9 [more]
AT4G27960.26.9e-5697.06ubiquitin conjugating enzyme 9 [more]
AT1G64230.19.0e-5696.08ubiquitin-conjugating enzyme 28 [more]
AT1G64230.29.0e-5696.08ubiquitin-conjugating enzyme 28 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..144
e-value: 1.2E-46
score: 171.0
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 3..103
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..103
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..133
e-value: 3.9E-52
score: 178.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..103
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..113
e-value: 8.8E-40
score: 135.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..154
score: 41.405415
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..102
e-value: 2.11187E-54
score: 167.379
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G000630.2CsGy5G000630.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0061631 ubiquitin conjugating enzyme activity