CsGy5G000530 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G000530
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 297857 .. 298910 (+)
RNA-Seq ExpressionCsGy5G000530
SyntenyCsGy5G000530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGAAGGTGAATTTGATTGGACTCGGTTCAGTGTTCTTGTGGTGGGTGAAAAAAACGTATGCGAGCTTTCTCCTATCCCGTTAATCGACTTTAATTTCACGCATTTTGAAGAAGAAATTCGGCGATCTTAGCTTTGATTGGTCGCCTGGTTCTATTGATTCAGCTGGAGAATTCCTTGGCTGTCTTCTTGTGATGTGATTAGGATGACAATATGCTCATGTGGGTTAATTGTTTCTATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGGTGTGACTAGAAAAGTGGAGTGGAGCATCTTTTACTTGCTTTTTGCTGTAGTTTTCTTTTCCCAACTAGACAAAATAGTACGTGGCAATATTCTTCAATGAGTATTTCTGTTGTTGATTTAACTTTGACATCTTTTTTTTTTCCTGATTTTAATTCATATTGTCTGCCAATTGGGAACATGAACTGTTGTTTGGATTTAAATAAGCCGCTCATTCCCTTTGGACTGGAAAGGCGTCTTTTAAGAATAAATGAAGGTTCTTTGGGCTTTTATGATTATATAAATCATCCCAAAATTACTTTAGAAGTTTCGTTTATTGAACTGGCTCCTCCATTTTGAAAAGGAAAATTCTGTTTTTATAGAAAAATTGAGAATGGTTATTTAGTGCCATTAACAAGACCATTGGTTTTCTTGTGTGTTTATTCTGAAATGAACAATTGTTTAGGATTTTCTTCGTCCCTTTGCATTATTCGGTATTATTTTTTACTATATGAGGTTATAGTTCTATTCTTGGATCTTTTTCATTTTATTGGATATCAGATGAGGCATCTTGATGCATCTATGCTAAGAGAACTAACAGTTGTTTGGCCTGGTTTTAGGGAACCAAAAAAAGAAAAAAAATAAATAAATACAGTTCTTATTCACCTCTTTCTCATTGCAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

mRNA sequence

ATGGACGAGAAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Coding sequence (CDS)

ATGGACGAGAAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Protein sequence

MDEKIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM*
Homology
[Close]
BLAST of CsGy5G000530 vs. NCBI nr
Match: KAE8647804.1 (hypothetical protein Csa_000130 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 3.58e-25
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 4  KIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50
          +IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 4  QIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50

[Close]
BLAST of CsGy5G000530 vs. ExPASy TrEMBL
Match: A0A0A0KLY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.81e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 5  IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50
          IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 31 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 76

The following BLAST results are available for this feature:
BLAST of CsGy5G000530 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G000530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647804.13.58e-2597.87hypothetical protein Csa_000130 [Cucumis sativus][more]
BLAST of CsGy5G000530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLY24.81e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1[more]
BLAST of CsGy5G000530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G000530.2CsGy5G000530.2mRNA